RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 CERS3Q8IU89 383 aa18.28■□□□□ 0.52
VARS2-203ENST00000428017 APOBEC3FQ8IUX4 373 aaKnown RBP18.28■□□□□ 0.52
VARS2-203ENST00000428017 SULF1Q8IWU6 871 aa18.28■□□□□ 0.52
VARS2-203ENST00000428017 MIGA1Q8NAN2 632 aa18.28■□□□□ 0.52
VARS2-203ENST00000428017 USP40Q9NVE5 1235 aa18.28■□□□□ 0.52
VARS2-203ENST00000428017 AATFQ9NY61 560 aaKnown RBP eCLIP18.28■□□□□ 0.52
VARS2-203ENST00000428017 ZNF70Q9UC06 446 aaPredicted RBP18.28■□□□□ 0.52
VARS2-203ENST00000428017 TOMM70O94826 608 aa18.27■□□□□ 0.52
VARS2-203ENST00000428017 POTEIP0CG38 1075 aa18.27■□□□□ 0.52
VARS2-203ENST00000428017 POTEJP0CG39 1038 aa18.27■□□□□ 0.52
VARS2-203ENST00000428017 TNFAIP1Q13829 316 aa18.27■□□□□ 0.52
VARS2-203ENST00000428017 SPDYE2Q495Y8 402 aa18.27■□□□□ 0.52
VARS2-203ENST00000428017 CHADLQ6NUI6 762 aa18.27■□□□□ 0.52
VARS2-203ENST00000428017 TICAM2Q86XR7 235 aa18.27■□□□□ 0.52
VARS2-203ENST00000428017 ASTN2O75129 1339 aaPredicted RBP18.26■□□□□ 0.51
VARS2-203ENST00000428017 MAGEB6P1A0A0J9YX57 407 aa18.26■□□□□ 0.51
VARS2-203ENST00000428017 GSPT1P15170 499 aaKnown RBP18.26■□□□□ 0.51
VARS2-203ENST00000428017 TNNI2P48788 182 aa18.26■□□□□ 0.51
VARS2-203ENST00000428017 MAP1SQ66K74 1059 aaPredicted RBP18.26■□□□□ 0.51
VARS2-203ENST00000428017 CDC42EP5Q6NZY7 148 aa18.26■□□□□ 0.51
VARS2-203ENST00000428017 ADGRA1Q86SQ6 560 aa18.26■□□□□ 0.51
VARS2-203ENST00000428017 SMC1BQ8NDV3 1235 aa18.26■□□□□ 0.51
VARS2-203ENST00000428017 PGAP2Q9UHJ9 254 aa18.26■□□□□ 0.51
VARS2-203ENST00000428017 PITPNM2Q9BZ72 1349 aa18.25■□□□□ 0.51
VARS2-203ENST00000428017 TCRBV5S4A2TA0A5A2 114 aa18.25■□□□□ 0.51
VARS2-203ENST00000428017 HIP1O00291 1037 aa18.25■□□□□ 0.51
VARS2-203ENST00000428017 SDSP20132 328 aa18.25■□□□□ 0.51
VARS2-203ENST00000428017 PPP4CP60510 307 aa18.25■□□□□ 0.51
VARS2-203ENST00000428017 KRT26Q7Z3Y9 468 aa18.25■□□□□ 0.51
VARS2-203ENST00000428017 TEX11Q8IYF3 940 aa18.25■□□□□ 0.51
VARS2-203ENST00000428017 RBM46Q8TBY0 533 aaKnown RBP18.25■□□□□ 0.51
VARS2-203ENST00000428017 APPBP2Q92624 585 aa18.25■□□□□ 0.51
VARS2-203ENST00000428017 AIDAQ96BJ3 306 aa18.25■□□□□ 0.51
VARS2-203ENST00000428017 DIAPH3Q9NSV4 1193 aa18.25■□□□□ 0.51
VARS2-203ENST00000428017 RFX7Q2KHR2 1363 aa18.25■□□□□ 0.51
VARS2-203ENST00000428017 MAST2Q6P0Q8 1798 aa18.25■□□□□ 0.51
VARS2-203ENST00000428017 TCP10L2B9ZVM9 353 aa18.24■□□□□ 0.51
VARS2-203ENST00000428017 BMP2KLQ5H9B9 411 aa18.24■□□□□ 0.51
VARS2-203ENST00000428017 CDC37L1Q7L3B6 337 aa18.24■□□□□ 0.51
VARS2-203ENST00000428017 SH3RF3Q8TEJ3 882 aaPredicted RBP18.24■□□□□ 0.51
VARS2-203ENST00000428017 MBD4O95243 580 aa18.23■□□□□ 0.51
VARS2-203ENST00000428017 CACNB3P54284 484 aa18.23■□□□□ 0.51
VARS2-203ENST00000428017 DYNLL1P63167 89 aaKnown RBP18.23■□□□□ 0.51
VARS2-203ENST00000428017 SLFNL1Q499Z3 407 aa18.23■□□□□ 0.51
VARS2-203ENST00000428017 FKBP1CQ5VVH2 108 aa18.23■□□□□ 0.51
VARS2-203ENST00000428017 USP48Q86UV5 1035 aa18.23■□□□□ 0.51
VARS2-203ENST00000428017 CRNKL1Q9BZJ0 848 aaKnown RBP18.23■□□□□ 0.51
VARS2-203ENST00000428017 CHGBP05060 677 aa18.22■□□□□ 0.51
VARS2-203ENST00000428017 RHBDL3P58872 404 aa18.22■□□□□ 0.51
VARS2-203ENST00000428017 ARMT1Q9H993 441 aa18.22■□□□□ 0.51
VARS2-203ENST00000428017 USP5P45974 858 aa18.21■□□□□ 0.51
VARS2-203ENST00000428017 FSTL1Q12841 308 aa18.21■□□□□ 0.51
VARS2-203ENST00000428017 PICALMQ13492 652 aa18.21■□□□□ 0.51
VARS2-203ENST00000428017 RASA3Q14644 834 aa18.21■□□□□ 0.51
VARS2-203ENST00000428017 ZMYM1Q5SVZ6 1142 aa18.21■□□□□ 0.51
VARS2-203ENST00000428017 RIOK1Q9BRS2 568 aaKnown RBP18.21■□□□□ 0.51
VARS2-203ENST00000428017 GLIS2Q9BZE0 524 aaPredicted RBP18.21■□□□□ 0.51
VARS2-203ENST00000428017 PUS7LQ9H0K6 701 aaKnown RBP18.21■□□□□ 0.51
VARS2-203ENST00000428017 DEFB129Q9H1M3 183 aa18.21■□□□□ 0.51
VARS2-203ENST00000428017 HELLSQ9NRZ9 838 aa18.21■□□□□ 0.51
VARS2-203ENST00000428017 PPP2R3BQ9Y5P8 575 aa18.21■□□□□ 0.51
VARS2-203ENST00000428017 DOCK2Q92608 1830 aa18.21■□□□□ 0.51
VARS2-203ENST00000428017 ADM5C9JUS6 153 aa18.2■□□□□ 0.5
VARS2-203ENST00000428017 TCP10Q12799 353 aa18.2■□□□□ 0.5
VARS2-203ENST00000428017 NMIQ13287 307 aaPredicted RBP18.2■□□□□ 0.5
VARS2-203ENST00000428017 FAM83AQ86UY5 434 aa18.2■□□□□ 0.5
VARS2-203ENST00000428017 LCORLQ8N3X6 602 aa18.2■□□□□ 0.5
VARS2-203ENST00000428017 TGFBRAP1Q8WUH2 860 aa18.2■□□□□ 0.5
VARS2-203ENST00000428017 OSBP2Q969R2 916 aa18.2■□□□□ 0.5
VARS2-203ENST00000428017 DDRGK1Q96HY6 314 aa18.2■□□□□ 0.5
VARS2-203ENST00000428017 IDI2Q9BXS1 227 aa18.2■□□□□ 0.5
VARS2-203ENST00000428017 SCAF8Q9UPN6 1271 aaKnown RBP18.2■□□□□ 0.5
VARS2-203ENST00000428017 ADAMTSL1Q8N6G6 1762 aa18.19■□□□□ 0.5
VARS2-203ENST00000428017 GPAA1O43292 621 aa18.19■□□□□ 0.5
VARS2-203ENST00000428017 ENTPD3O75355 529 aa18.19■□□□□ 0.5
VARS2-203ENST00000428017 WDHD1O75717 1129 aaPredicted RBP18.19■□□□□ 0.5
VARS2-203ENST00000428017 NFIAQ12857 509 aa18.19■□□□□ 0.5
VARS2-203ENST00000428017 CASC1Q6TDU7 716 aa18.19■□□□□ 0.5
VARS2-203ENST00000428017 CWC27Q6UX04 472 aaKnown RBP18.19■□□□□ 0.5
VARS2-203ENST00000428017 ZSCAN29Q8IWY8 852 aaPredicted RBP18.19■□□□□ 0.5
VARS2-203ENST00000428017 RUFY2Q8WXA3 655 aa18.19■□□□□ 0.5
VARS2-203ENST00000428017 SLC4A4Q9Y6R1 1079 aa18.19■□□□□ 0.5
VARS2-203ENST00000428017 M0R2C6 588 aa18.18■□□□□ 0.5
VARS2-203ENST00000428017 GNAT2P19087 354 aa18.18■□□□□ 0.5
VARS2-203ENST00000428017 MFAP1P55081 439 aaKnown RBP18.18■□□□□ 0.5
VARS2-203ENST00000428017 MCMDC2Q4G0Z9 681 aa18.18■□□□□ 0.5
VARS2-203ENST00000428017 MAPKAPK5Q8IW41 473 aa18.18■□□□□ 0.5
VARS2-203ENST00000428017 FAM151AQ8WW52 585 aa18.18■□□□□ 0.5
VARS2-203ENST00000428017 FAM227BQ96M60 508 aa18.18■□□□□ 0.5
VARS2-203ENST00000428017 SEC62Q99442 399 aaKnown RBP18.18■□□□□ 0.5
VARS2-203ENST00000428017 FAM198AQ9UFP1 575 aa18.18■□□□□ 0.5
VARS2-203ENST00000428017 MYH2Q9UKX2 1941 aa18.17■□□□□ 0.5
VARS2-203ENST00000428017 A0A0D9SFI3 127 aa18.17■□□□□ 0.5
VARS2-203ENST00000428017 NPM3O75607 178 aaKnown RBP18.17■□□□□ 0.5
VARS2-203ENST00000428017 APPP05067 770 aa18.17■□□□□ 0.5
VARS2-203ENST00000428017 NF2P35240 595 aa18.17■□□□□ 0.5
VARS2-203ENST00000428017 SUPT20HL1Q3ZLR7 823 aa18.17■□□□□ 0.5
VARS2-203ENST00000428017 HOOK2Q96ED9 719 aa18.17■□□□□ 0.5
VARS2-203ENST00000428017 CDCA5Q96FF9 252 aa18.17■□□□□ 0.5
VARS2-203ENST00000428017 STRBPQ96SI9 672 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms