RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 ADD1P35611 737 aaKnown RBP16.38■□□□□ 0.21
APOBEC3D-202ENST00000427494 METAP2P50579 478 aaKnown RBP eCLIP16.38■□□□□ 0.21
APOBEC3D-202ENST00000427494 TMEM67Q5HYA8 995 aa16.38■□□□□ 0.21
APOBEC3D-202ENST00000427494 TRAPPC3LQ5T215 181 aa16.38■□□□□ 0.21
APOBEC3D-202ENST00000427494 NFXL1Q6ZNB6 911 aa16.38■□□□□ 0.21
APOBEC3D-202ENST00000427494 ADGRA1Q86SQ6 560 aa16.38■□□□□ 0.21
APOBEC3D-202ENST00000427494 KLHL34Q8N239 644 aa16.38■□□□□ 0.21
APOBEC3D-202ENST00000427494 BICD2Q8TD16 824 aa16.38■□□□□ 0.21
APOBEC3D-202ENST00000427494 PGBD1Q96JS3 809 aa16.38■□□□□ 0.21
APOBEC3D-202ENST00000427494 PDLIM2Q96JY6 352 aa16.38■□□□□ 0.21
APOBEC3D-202ENST00000427494 C8orf76Q96K31 380 aa16.38■□□□□ 0.21
APOBEC3D-202ENST00000427494 ZNF396Q96N95 335 aaPredicted RBP16.38■□□□□ 0.21
APOBEC3D-202ENST00000427494 NUP62CLQ9H1M0 184 aa16.38■□□□□ 0.21
APOBEC3D-202ENST00000427494 KDM4AO75164 1064 aa16.37■□□□□ 0.21
APOBEC3D-202ENST00000427494 KLRK1P26718 216 aa16.37■□□□□ 0.21
APOBEC3D-202ENST00000427494 HSPA1LP34931 641 aa16.37■□□□□ 0.21
APOBEC3D-202ENST00000427494 APOA5Q6Q788 366 aa16.37■□□□□ 0.21
APOBEC3D-202ENST00000427494 FAM196AQ6ZSG2 479 aa16.37■□□□□ 0.21
APOBEC3D-202ENST00000427494 MFSD6Q6ZSS7 791 aa16.37■□□□□ 0.21
APOBEC3D-202ENST00000427494 IGDCC4Q8TDY8 1250 aa16.37■□□□□ 0.21
APOBEC3D-202ENST00000427494 FUCA2Q9BTY2 467 aa16.37■□□□□ 0.21
APOBEC3D-202ENST00000427494 KRT23Q9C075 422 aa16.37■□□□□ 0.21
APOBEC3D-202ENST00000427494 ANKRD2Q9GZV1 360 aa16.37■□□□□ 0.21
APOBEC3D-202ENST00000427494 LY9Q9HBG7 655 aa16.37■□□□□ 0.21
APOBEC3D-202ENST00000427494 SENP2Q9HC62 589 aa16.37■□□□□ 0.21
APOBEC3D-202ENST00000427494 TRPC5Q9UL62 973 aaPredicted RBP16.37■□□□□ 0.21
APOBEC3D-202ENST00000427494 TACC3Q9Y6A5 838 aa16.37■□□□□ 0.21
APOBEC3D-202ENST00000427494 ESPNB1AK53 854 aa16.37■□□□□ 0.21
APOBEC3D-202ENST00000427494 ONECUT3O60422 494 aaPredicted RBP16.37■□□□□ 0.21
APOBEC3D-202ENST00000427494 FBXO33Q7Z6M2 555 aa16.37■□□□□ 0.21
APOBEC3D-202ENST00000427494 CERKQ8TCT0 537 aa16.37■□□□□ 0.21
APOBEC3D-202ENST00000427494 DACT1Q9NYF0 836 aa16.37■□□□□ 0.21
APOBEC3D-202ENST00000427494 RXRAP19793 462 aa16.36■□□□□ 0.21
APOBEC3D-202ENST00000427494 RRP12Q5JTH9 1297 aaKnown RBP16.36■□□□□ 0.21
APOBEC3D-202ENST00000427494 ATL3Q6DD88 541 aa16.36■□□□□ 0.21
APOBEC3D-202ENST00000427494 OTUD7BQ6GQQ9 843 aa16.36■□□□□ 0.21
APOBEC3D-202ENST00000427494 ILDR1Q86SU0 546 aaPredicted RBP16.36■□□□□ 0.21
APOBEC3D-202ENST00000427494 MICU3Q86XE3 530 aa16.36■□□□□ 0.21
APOBEC3D-202ENST00000427494 STAG1Q8WVM7 1258 aa16.36■□□□□ 0.21
APOBEC3D-202ENST00000427494 FTOQ9C0B1 505 aaKnown RBP eCLIP16.36■□□□□ 0.21
APOBEC3D-202ENST00000427494 TOMM22Q9NS69 142 aa16.36■□□□□ 0.21
APOBEC3D-202ENST00000427494 DDX19AQ9NUU7 478 aaKnown RBP16.36■□□□□ 0.21
APOBEC3D-202ENST00000427494 ZSWIM5Q9P217 1185 aa16.36■□□□□ 0.21
APOBEC3D-202ENST00000427494 ECM29Q5VYK3 1845 aa16.36■□□□□ 0.21
APOBEC3D-202ENST00000427494 IFIT3O14879 490 aaKnown RBP16.35■□□□□ 0.21
APOBEC3D-202ENST00000427494 SEMA3EO15041 775 aa16.35■□□□□ 0.21
APOBEC3D-202ENST00000427494 ZBTB43O43298 467 aa16.35■□□□□ 0.21
APOBEC3D-202ENST00000427494 CDKL5O76039 1030 aa16.35■□□□□ 0.21
APOBEC3D-202ENST00000427494 CAMK4Q16566 473 aa16.35■□□□□ 0.21
APOBEC3D-202ENST00000427494 MAP3K11Q16584 847 aa16.35■□□□□ 0.21
APOBEC3D-202ENST00000427494 SDR42E1Q8WUS8 393 aa16.35■□□□□ 0.21
APOBEC3D-202ENST00000427494 USP28Q96RU2 1077 aa16.35■□□□□ 0.21
APOBEC3D-202ENST00000427494 GOLGA8AA7E2F4 631 aa16.35■□□□□ 0.21
APOBEC3D-202ENST00000427494 TM4SF1P30408 202 aa16.35■□□□□ 0.21
APOBEC3D-202ENST00000427494 UVSSAQ2YD98 709 aa16.35■□□□□ 0.21
APOBEC3D-202ENST00000427494 SGMS1Q86VZ5 419 aa16.35■□□□□ 0.21
APOBEC3D-202ENST00000427494 STK11IPQ8N1F8 1099 aa16.35■□□□□ 0.21
APOBEC3D-202ENST00000427494 FBXO18Q8NFZ0 1043 aa16.35■□□□□ 0.21
APOBEC3D-202ENST00000427494 BCL11BQ9C0K0 894 aaPredicted RBP16.35■□□□□ 0.21
APOBEC3D-202ENST00000427494 TNMDQ9H2S6 317 aa16.35■□□□□ 0.21
APOBEC3D-202ENST00000427494 TFCP2L1Q9NZI6 479 aa16.35■□□□□ 0.21
APOBEC3D-202ENST00000427494 RCOR1Q9UKL0 485 aa16.35■□□□□ 0.21
APOBEC3D-202ENST00000427494 CCDC69A6NI79 296 aa16.34■□□□□ 0.21
APOBEC3D-202ENST00000427494 HIBADHP31937 336 aaKnown RBP16.34■□□□□ 0.21
APOBEC3D-202ENST00000427494 LIFRP42702 1097 aa16.34■□□□□ 0.21
APOBEC3D-202ENST00000427494 PPARAQ07869 468 aa16.34■□□□□ 0.21
APOBEC3D-202ENST00000427494 NFIXQ14938 502 aa16.34■□□□□ 0.21
APOBEC3D-202ENST00000427494 CPLX2Q6PUV4 134 aaKnown RBP16.34■□□□□ 0.21
APOBEC3D-202ENST00000427494 CCDC144CPQ8IYA2 1237 aa16.34■□□□□ 0.21
APOBEC3D-202ENST00000427494 CLSTN2Q9H4D0 955 aa16.34■□□□□ 0.21
APOBEC3D-202ENST00000427494 LRRC4BQ9NT99 713 aa16.34■□□□□ 0.21
APOBEC3D-202ENST00000427494 NR1I2O75469 434 aa16.33■□□□□ 0.21
APOBEC3D-202ENST00000427494 CCDC192P0DO97 292 aa16.33■□□□□ 0.21
APOBEC3D-202ENST00000427494 CDC27P30260 824 aa16.33■□□□□ 0.21
APOBEC3D-202ENST00000427494 RIOK1Q9BRS2 568 aaKnown RBP16.33■□□□□ 0.21
APOBEC3D-202ENST00000427494 MYL10Q9BUA6 226 aa16.33■□□□□ 0.21
APOBEC3D-202ENST00000427494 RNF41Q9H4P4 317 aaPredicted RBP16.33■□□□□ 0.21
APOBEC3D-202ENST00000427494 UBR3Q6ZT12 1888 aa16.33■□□□□ 0.2
APOBEC3D-202ENST00000427494 MAST2Q6P0Q8 1798 aa16.33■□□□□ 0.2
APOBEC3D-202ENST00000427494 MINDY4BA8MYZ0 360 aa16.33■□□□□ 0.2
APOBEC3D-202ENST00000427494 DYNLL1P63167 89 aaKnown RBP16.33■□□□□ 0.2
APOBEC3D-202ENST00000427494 SART3Q15020 963 aaKnown RBP16.33■□□□□ 0.2
APOBEC3D-202ENST00000427494 CNBD1Q8NA66 436 aa16.33■□□□□ 0.2
APOBEC3D-202ENST00000427494 GJB4Q9NTQ9 266 aa16.33■□□□□ 0.2
APOBEC3D-202ENST00000427494 SLC12A7Q9Y666 1083 aa16.33■□□□□ 0.2
APOBEC3D-202ENST00000427494 PDS5AQ29RF7 1337 aaKnown RBP16.33■□□□□ 0.2
APOBEC3D-202ENST00000427494 BAZ2AQ9UIF9 1905 aaKnown RBP16.32■□□□□ 0.2
APOBEC3D-202ENST00000427494 CHAF1AQ13111 956 aaPredicted RBP16.32■□□□□ 0.2
APOBEC3D-202ENST00000427494 SYNE3Q6ZMZ3 975 aa16.32■□□□□ 0.2
APOBEC3D-202ENST00000427494 ZNF384Q8TF68 577 aa16.32■□□□□ 0.2
APOBEC3D-202ENST00000427494 ZKSCAN3Q9BRR0 538 aa16.32■□□□□ 0.2
APOBEC3D-202ENST00000427494 ALG1Q9BT22 464 aa16.32■□□□□ 0.2
APOBEC3D-202ENST00000427494 HS1BP3Q53T59 392 aa16.31■□□□□ 0.2
APOBEC3D-202ENST00000427494 BRAPQ7Z569 592 aa16.31■□□□□ 0.2
APOBEC3D-202ENST00000427494 CCAR1Q8IX12 1150 aaKnown RBP16.31■□□□□ 0.2
APOBEC3D-202ENST00000427494 CKAP2LQ8IYA6 745 aa16.31■□□□□ 0.2
APOBEC3D-202ENST00000427494 PHKBQ93100 1093 aa16.31■□□□□ 0.2
APOBEC3D-202ENST00000427494 CCDC88AQ3V6T2 1871 aa16.31■□□□□ 0.2
APOBEC3D-202ENST00000427494 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.31■□□□□ 0.2
APOBEC3D-202ENST00000427494 ERICH2A1L162 156 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms