RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 PAPPA2Q9BXP8 1791 aa30.61■■■□□ 2.49
HERPUD2-205ENST00000427455 IDH1O75874 414 aaKnown RBP30.6■■■□□ 2.49
HERPUD2-205ENST00000427455 NF2P35240 595 aa30.6■■■□□ 2.49
HERPUD2-205ENST00000427455 BTDP43251 543 aa30.6■■■□□ 2.49
HERPUD2-205ENST00000427455 CACNB3P54284 484 aa30.6■■■□□ 2.49
HERPUD2-205ENST00000427455 GPR75-ASB3A0A0A6YYF3 556 aa30.59■■■□□ 2.49
HERPUD2-205ENST00000427455 GOLIM4O00461 696 aa30.59■■■□□ 2.49
HERPUD2-205ENST00000427455 CENPBP07199 599 aaPredicted RBP30.59■■■□□ 2.49
HERPUD2-205ENST00000427455 C2orf69Q8N8R5 385 aa30.59■■■□□ 2.49
HERPUD2-205ENST00000427455 HAUS7Q99871 368 aa30.59■■■□□ 2.49
HERPUD2-205ENST00000427455 USP40Q9NVE5 1235 aa30.59■■■□□ 2.49
HERPUD2-205ENST00000427455 TTC41PQ6P2S7 1318 aa30.58■■■□□ 2.49
HERPUD2-205ENST00000427455 MAP3K12Q12852 859 aa30.58■■■□□ 2.49
HERPUD2-205ENST00000427455 TMED8Q6PL24 325 aaPredicted RBP30.58■■■□□ 2.49
HERPUD2-205ENST00000427455 SAPCD2Q86UD0 394 aa30.58■■■□□ 2.49
HERPUD2-205ENST00000427455 FAM83AQ86UY5 434 aa30.58■■■□□ 2.49
HERPUD2-205ENST00000427455 PAG1Q9NWQ8 432 aa30.58■■■□□ 2.49
HERPUD2-205ENST00000427455 CNTNAP1P78357 1384 aa30.57■■■□□ 2.48
HERPUD2-205ENST00000427455 RASSF10A6NK89 507 aa30.57■■■□□ 2.48
HERPUD2-205ENST00000427455 FKBP1BP68106 108 aa30.57■■■□□ 2.48
HERPUD2-205ENST00000427455 RFX7Q2KHR2 1363 aa30.56■■■□□ 2.48
HERPUD2-205ENST00000427455 DNAJC5GQ8N7S2 189 aa30.56■■■□□ 2.48
HERPUD2-205ENST00000427455 OTUD7AQ8TE49 926 aaPredicted RBP30.56■■■□□ 2.48
HERPUD2-205ENST00000427455 SSC5DA1L4H1 1573 aa30.56■■■□□ 2.48
HERPUD2-205ENST00000427455 RPAP1Q9BWH6 1393 aaPredicted RBP30.55■■■□□ 2.48
HERPUD2-205ENST00000427455 MX1P20591 662 aa30.55■■■□□ 2.48
HERPUD2-205ENST00000427455 SUPT20HL1Q3ZLR7 823 aa30.55■■■□□ 2.48
HERPUD2-205ENST00000427455 TSHZ3Q63HK5 1081 aa30.55■■■□□ 2.48
HERPUD2-205ENST00000427455 NOL10Q9BSC4 688 aaKnown RBP30.55■■■□□ 2.48
HERPUD2-205ENST00000427455 TMEM39BQ9GZU3 492 aa30.55■■■□□ 2.48
HERPUD2-205ENST00000427455 SALL3Q9BXA9 1300 aa30.54■■■□□ 2.48
HERPUD2-205ENST00000427455 MAP4K4O95819 1239 aaPredicted RBP30.54■■■□□ 2.48
HERPUD2-205ENST00000427455 MAGEB6Q8N7X4 407 aa30.54■■■□□ 2.48
HERPUD2-205ENST00000427455 KLRG1Q96E93 195 aa30.54■■■□□ 2.48
HERPUD2-205ENST00000427455 EDC3Q96F86 508 aaKnown RBP30.54■■■□□ 2.48
HERPUD2-205ENST00000427455 MKRN1Q9UHC7 482 aaKnown RBP30.54■■■□□ 2.48
HERPUD2-205ENST00000427455 ERC2O15083 957 aa30.53■■■□□ 2.48
HERPUD2-205ENST00000427455 HUNKP57058 714 aa30.53■■■□□ 2.48
HERPUD2-205ENST00000427455 RHBDL3P58872 404 aa30.53■■■□□ 2.48
HERPUD2-205ENST00000427455 NFIAQ12857 509 aa30.53■■■□□ 2.48
HERPUD2-205ENST00000427455 B4GALNT3Q6L9W6 998 aa30.53■■■□□ 2.48
HERPUD2-205ENST00000427455 HHIPL1Q96JK4 782 aa30.53■■■□□ 2.48
HERPUD2-205ENST00000427455 TEPSINQ96N21 525 aa30.53■■■□□ 2.48
HERPUD2-205ENST00000427455 IDI2Q9BXS1 227 aa30.53■■■□□ 2.48
HERPUD2-205ENST00000427455 BAG3O95817 575 aa30.52■■■□□ 2.48
HERPUD2-205ENST00000427455 CYP7A1P22680 504 aa30.52■■■□□ 2.48
HERPUD2-205ENST00000427455 NUCB1Q02818 461 aa30.52■■■□□ 2.48
HERPUD2-205ENST00000427455 DEFB115Q30KQ5 88 aa30.52■■■□□ 2.48
HERPUD2-205ENST00000427455 NBPF12Q5TAG4 269 aaPredicted RBP30.52■■■□□ 2.48
HERPUD2-205ENST00000427455 ADGRA1Q86SQ6 560 aa30.52■■■□□ 2.48
HERPUD2-205ENST00000427455 LNPKQ9C0E8 428 aa30.52■■■□□ 2.48
HERPUD2-205ENST00000427455 CHD1LQ86WJ1 897 aa30.51■■■□□ 2.47
HERPUD2-205ENST00000427455 FAM151AQ8WW52 585 aa30.51■■■□□ 2.47
HERPUD2-205ENST00000427455 AATFQ9NY61 560 aaKnown RBP eCLIP30.51■■■□□ 2.47
HERPUD2-205ENST00000427455 FAM198AQ9UFP1 575 aa30.51■■■□□ 2.47
HERPUD2-205ENST00000427455 WDHD1O75717 1129 aaPredicted RBP30.5■■■□□ 2.47
HERPUD2-205ENST00000427455 GLRX3O76003 335 aaKnown RBP30.5■■■□□ 2.47
HERPUD2-205ENST00000427455 PLCG2P16885 1265 aa30.5■■■□□ 2.47
HERPUD2-205ENST00000427455 PPP4CP60510 307 aa30.5■■■□□ 2.47
HERPUD2-205ENST00000427455 TTLL12Q14166 644 aaPredicted RBP30.5■■■□□ 2.47
HERPUD2-205ENST00000427455 CDAN1Q8IWY9 1227 aa30.5■■■□□ 2.47
HERPUD2-205ENST00000427455 PI4K2BQ8TCG2 481 aa30.5■■■□□ 2.47
HERPUD2-205ENST00000427455 PDE6AP16499 860 aa30.49■■■□□ 2.47
HERPUD2-205ENST00000427455 RGS3P49796 1198 aa30.49■■■□□ 2.47
HERPUD2-205ENST00000427455 TCP10Q12799 353 aa30.49■■■□□ 2.47
HERPUD2-205ENST00000427455 SLC9C2Q5TAH2 1124 aa30.49■■■□□ 2.47
HERPUD2-205ENST00000427455 CERS3Q8IU89 383 aa30.49■■■□□ 2.47
HERPUD2-205ENST00000427455 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.49■■■□□ 2.47
HERPUD2-205ENST00000427455 MYH7P12883 1935 aa30.49■■■□□ 2.47
HERPUD2-205ENST00000427455 PPP1R12BO60237 982 aaPredicted RBP30.48■■■□□ 2.47
HERPUD2-205ENST00000427455 ENTPD3O75355 529 aa30.48■■■□□ 2.47
HERPUD2-205ENST00000427455 ARMC9Q7Z3E5 817 aa30.48■■■□□ 2.47
HERPUD2-205ENST00000427455 STAP2Q9UGK3 403 aa30.48■■■□□ 2.47
HERPUD2-205ENST00000427455 NPM3O75607 178 aaKnown RBP30.47■■■□□ 2.47
HERPUD2-205ENST00000427455 PAXIP1Q6ZW49 1069 aaPredicted RBP30.47■■■□□ 2.47
HERPUD2-205ENST00000427455 MOB2Q70IA6 237 aa30.47■■■□□ 2.47
HERPUD2-205ENST00000427455 TEX11Q8IYF3 940 aa30.47■■■□□ 2.47
HERPUD2-205ENST00000427455 HOOK2Q96ED9 719 aa30.47■■■□□ 2.47
HERPUD2-205ENST00000427455 PDE1AP54750 535 aa30.46■■■□□ 2.47
HERPUD2-205ENST00000427455 PICALMQ13492 652 aa30.46■■■□□ 2.47
HERPUD2-205ENST00000427455 PRKG1Q13976 671 aa30.46■■■□□ 2.47
HERPUD2-205ENST00000427455 SH3RF3Q8TEJ3 882 aaPredicted RBP30.46■■■□□ 2.47
HERPUD2-205ENST00000427455 DDX4Q9NQI0 724 aaKnown RBP30.46■■■□□ 2.47
HERPUD2-205ENST00000427455 ANGEL1Q9UNK9 670 aaKnown RBP30.46■■■□□ 2.47
HERPUD2-205ENST00000427455 ZNF532Q9HCE3 1301 aa30.46■■■□□ 2.47
HERPUD2-205ENST00000427455 ECE1P42892 770 aa30.45■■■□□ 2.47
HERPUD2-205ENST00000427455 VEGFBP49765 207 aa30.45■■■□□ 2.47
HERPUD2-205ENST00000427455 MAP3K11Q16584 847 aa30.45■■■□□ 2.47
HERPUD2-205ENST00000427455 MIGA1Q8NAN2 632 aa30.45■■■□□ 2.47
HERPUD2-205ENST00000427455 FOCADQ5VW36 1801 aa30.45■■■□□ 2.46
HERPUD2-205ENST00000427455 CDK5RAP2Q96SN8 1893 aa30.44■■■□□ 2.46
HERPUD2-205ENST00000427455 TCRBV5S4A2TA0A5A2 114 aa30.44■■■□□ 2.46
HERPUD2-205ENST00000427455 UBE2Q2LH0YL09 131 aa30.44■■■□□ 2.46
HERPUD2-205ENST00000427455 NEFLP07196 543 aa30.44■■■□□ 2.46
HERPUD2-205ENST00000427455 ADD2P35612 726 aa30.44■■■□□ 2.46
HERPUD2-205ENST00000427455 ZSCAN25Q6NSZ9 544 aa30.44■■■□□ 2.46
HERPUD2-205ENST00000427455 CYP4F22Q6NT55 531 aa30.44■■■□□ 2.46
HERPUD2-205ENST00000427455 RGMBQ6NW40 437 aa30.44■■■□□ 2.46
HERPUD2-205ENST00000427455 KBTBD3Q8NAB2 608 aa30.44■■■□□ 2.46
HERPUD2-205ENST00000427455 CAPNS2Q96L46 248 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms