RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 TMEM39AQ9NV64 488 aa4.22□□□□□ -1.73
PTPRC-208ENST00000427110 PCMTD2Q9NV79 361 aa4.22□□□□□ -1.73
PTPRC-208ENST00000427110 HIF3AQ9Y2N7 669 aa4.22□□□□□ -1.73
PTPRC-208ENST00000427110 PRR19A6NJB7 356 aa4.21□□□□□ -1.74
PTPRC-208ENST00000427110 GSC2O15499 205 aa4.21□□□□□ -1.74
PTPRC-208ENST00000427110 PAGE1O75459 146 aa4.21□□□□□ -1.74
PTPRC-208ENST00000427110 F13BP05160 661 aa4.21□□□□□ -1.74
PTPRC-208ENST00000427110 LDHBP07195 334 aaKnown RBP4.21□□□□□ -1.74
PTPRC-208ENST00000427110 GSTP1P09211 210 aaKnown RBP4.21□□□□□ -1.74
PTPRC-208ENST00000427110 HOXA10P31260 410 aaPredicted RBP4.21□□□□□ -1.74
PTPRC-208ENST00000427110 ASPAP45381 313 aa4.21□□□□□ -1.74
PTPRC-208ENST00000427110 AP3B2Q13367 1082 aa4.21□□□□□ -1.74
PTPRC-208ENST00000427110 RPS26P11Q5JNZ5 115 aaPredicted RBP4.21□□□□□ -1.74
PTPRC-208ENST00000427110 NBPF11Q86T75 865 aa4.21□□□□□ -1.74
PTPRC-208ENST00000427110 SULF2Q8IWU5 870 aa4.21□□□□□ -1.74
PTPRC-208ENST00000427110 DDX54Q8TDD1 881 aaKnown RBP4.21□□□□□ -1.74
PTPRC-208ENST00000427110 KCNB2Q92953 911 aa4.21□□□□□ -1.74
PTPRC-208ENST00000427110 SEMA6CQ9H3T2 930 aa4.21□□□□□ -1.74
PTPRC-208ENST00000427110 DAGLAQ9Y4D2 1042 aa4.21□□□□□ -1.74
PTPRC-208ENST00000427110 FAM170BA6NMN3 283 aa4.2□□□□□ -1.74
PTPRC-208ENST00000427110 TMPRSS2O15393 492 aa4.2□□□□□ -1.74
PTPRC-208ENST00000427110 ADAMTS4O75173 837 aa4.2□□□□□ -1.74
PTPRC-208ENST00000427110 CD97P48960 835 aa4.2□□□□□ -1.74
PTPRC-208ENST00000427110 RASIP1Q5U651 963 aa4.2□□□□□ -1.74
PTPRC-208ENST00000427110 MAP1SQ66K74 1059 aaPredicted RBP4.2□□□□□ -1.74
PTPRC-208ENST00000427110 PAOXQ6QHF9 649 aa4.2□□□□□ -1.74
PTPRC-208ENST00000427110 PDZD3Q86UT5 571 aa4.2□□□□□ -1.74
PTPRC-208ENST00000427110 GRIN3AQ8TCU5 1115 aa4.2□□□□□ -1.74
PTPRC-208ENST00000427110 TBC1D32Q96NH3 1257 aa4.2□□□□□ -1.74
PTPRC-208ENST00000427110 CBX8Q9HC52 389 aa4.2□□□□□ -1.74
PTPRC-208ENST00000427110 PPP4R2Q9NY27 417 aa4.2□□□□□ -1.74
PTPRC-208ENST00000427110 ANKRD33BA6NCL7 494 aa4.19□□□□□ -1.74
PTPRC-208ENST00000427110 ENC1O14682 589 aa4.19□□□□□ -1.74
PTPRC-208ENST00000427110 COBLO75128 1261 aa4.19□□□□□ -1.74
PTPRC-208ENST00000427110 USP17L7P0C7H9 530 aa4.19□□□□□ -1.74
PTPRC-208ENST00000427110 HCLS1P14317 486 aaPredicted RBP4.19□□□□□ -1.74
PTPRC-208ENST00000427110 ATP2B2Q01814 1243 aa4.19□□□□□ -1.74
PTPRC-208ENST00000427110 PPP2R3AQ06190 1150 aa4.19□□□□□ -1.74
PTPRC-208ENST00000427110 HP1BP3Q5SSJ5 553 aaPredicted RBP4.19□□□□□ -1.74
PTPRC-208ENST00000427110 ALG1LQ6GMV1 187 aa4.19□□□□□ -1.74
PTPRC-208ENST00000427110 FBF1Q8TES7 1133 aa4.19□□□□□ -1.74
PTPRC-208ENST00000427110 EZH1Q92800 747 aaPredicted RBP4.19□□□□□ -1.74
PTPRC-208ENST00000427110 GATA6Q92908 595 aa4.19□□□□□ -1.74
PTPRC-208ENST00000427110 ACSS3Q9H6R3 686 aa4.19□□□□□ -1.74
PTPRC-208ENST00000427110 PRKAG2Q9UGJ0 569 aa4.19□□□□□ -1.74
PTPRC-208ENST00000427110 PCDHGC5Q9Y5F6 944 aa4.19□□□□□ -1.74
PTPRC-208ENST00000427110 CSADQ9Y600 493 aa4.19□□□□□ -1.74
PTPRC-208ENST00000427110 CELA3AP09093 270 aa4.18□□□□□ -1.74
PTPRC-208ENST00000427110 XRCC5P13010 732 aaKnown RBP4.18□□□□□ -1.74
PTPRC-208ENST00000427110 ARNTP27540 789 aa4.18□□□□□ -1.74
PTPRC-208ENST00000427110 GSTT1P30711 240 aa4.18□□□□□ -1.74
PTPRC-208ENST00000427110 ID3Q02535 119 aa4.18□□□□□ -1.74
PTPRC-208ENST00000427110 CDK5R2Q13319 367 aa4.18□□□□□ -1.74
PTPRC-208ENST00000427110 TTLL4Q14679 1199 aa4.18□□□□□ -1.74
PTPRC-208ENST00000427110 KIF4BQ2VIQ3 1234 aa4.18□□□□□ -1.74
PTPRC-208ENST00000427110 ZNF765Q7L2R6 523 aa4.18□□□□□ -1.74
PTPRC-208ENST00000427110 ZAR1Q86SH2 424 aa4.18□□□□□ -1.74
PTPRC-208ENST00000427110 SLC51AQ86UW1 340 aa4.18□□□□□ -1.74
PTPRC-208ENST00000427110 GPBAR1Q8TDU6 330 aa4.18□□□□□ -1.74
PTPRC-208ENST00000427110 NECAB3Q96P71 396 aaPredicted RBP4.18□□□□□ -1.74
PTPRC-208ENST00000427110 FANCD2OSQ96PS1 177 aa4.18□□□□□ -1.74
PTPRC-208ENST00000427110 YIPF2Q9BWQ6 316 aa4.18□□□□□ -1.74
PTPRC-208ENST00000427110 OSBPL1AQ9BXW6 950 aa4.18□□□□□ -1.74
PTPRC-208ENST00000427110 C12orf49Q9H741 205 aa4.18□□□□□ -1.74
PTPRC-208ENST00000427110 DISC1Q9NRI5 854 aa4.18□□□□□ -1.74
PTPRC-208ENST00000427110 ATG3Q9NT62 314 aa4.18□□□□□ -1.74
PTPRC-208ENST00000427110 CRIM1Q9NZV1 1036 aa4.18□□□□□ -1.74
PTPRC-208ENST00000427110 PIM2Q9P1W9 311 aa4.18□□□□□ -1.74
PTPRC-208ENST00000427110 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.17□□□□□ -1.74
PTPRC-208ENST00000427110 KIAA1324LA8MWY0 1029 aaPredicted RBP4.17□□□□□ -1.74
PTPRC-208ENST00000427110 EIF4EBP3O60516 100 aaPredicted RBP4.17□□□□□ -1.74
PTPRC-208ENST00000427110 RNGTTO60942 597 aaKnown RBP4.17□□□□□ -1.74
PTPRC-208ENST00000427110 NEFMP07197 916 aa4.17□□□□□ -1.74
PTPRC-208ENST00000427110 BMP6P22004 513 aa4.17□□□□□ -1.74
PTPRC-208ENST00000427110 NME2P22392 152 aa4.17□□□□□ -1.74
PTPRC-208ENST00000427110 MAP7Q14244 749 aa4.17□□□□□ -1.74
PTPRC-208ENST00000427110 SEZ6L2Q6UXD5 910 aa4.17□□□□□ -1.74
PTPRC-208ENST00000427110 UBE3DQ7Z6J8 389 aa4.17□□□□□ -1.74
PTPRC-208ENST00000427110 ACSBG1Q96GR2 724 aa4.17□□□□□ -1.74
PTPRC-208ENST00000427110 FAM161BQ96MY7 647 aa4.17□□□□□ -1.74
PTPRC-208ENST00000427110 DUSP9Q99956 384 aaKnown RBP4.17□□□□□ -1.74
PTPRC-208ENST00000427110 GSX1Q9H4S2 264 aaPredicted RBP4.17□□□□□ -1.74
PTPRC-208ENST00000427110 PIDD1Q9HB75 910 aa4.17□□□□□ -1.74
PTPRC-208ENST00000427110 ZFYVE1Q9HBF4 777 aa4.17□□□□□ -1.74
PTPRC-208ENST00000427110 LRRC4CQ9HCJ2 640 aa4.17□□□□□ -1.74
PTPRC-208ENST00000427110 C1GALT1Q9NS00 363 aa4.17□□□□□ -1.74
PTPRC-208ENST00000427110 SPG7Q9UQ90 795 aa4.17□□□□□ -1.74
PTPRC-208ENST00000427110 LEMD3Q9Y2U8 911 aa4.17□□□□□ -1.74
PTPRC-208ENST00000427110 DCDC2CA8MYV0 355 aa4.16□□□□□ -1.74
PTPRC-208ENST00000427110 SLFN14P0C7P3 912 aa4.16□□□□□ -1.74
PTPRC-208ENST00000427110 ERCC3P19447 782 aa4.16□□□□□ -1.74
PTPRC-208ENST00000427110 SPINK2P20155 84 aa4.16□□□□□ -1.74
PTPRC-208ENST00000427110 GRIK1P39086 918 aa4.16□□□□□ -1.74
PTPRC-208ENST00000427110 TAGLNQ01995 201 aaKnown RBP4.16□□□□□ -1.74
PTPRC-208ENST00000427110 ZNF252P-AS1Q0IIN9 211 aa4.16□□□□□ -1.74
PTPRC-208ENST00000427110 DNAJC14Q6Y2X3 702 aaPredicted RBP4.16□□□□□ -1.74
PTPRC-208ENST00000427110 RGS22Q8NE09 1264 aa4.16□□□□□ -1.74
PTPRC-208ENST00000427110 KRT82Q9NSB4 513 aa4.16□□□□□ -1.74
PTPRC-208ENST00000427110 TTF2Q9UNY4 1162 aaKnown RBP4.16□□□□□ -1.74
PTPRC-208ENST00000427110 OAS3Q9Y6K5 1087 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms