RNA–Protein interactions for RNA: ENST00000426658.6

CTCFL-206, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 3,996 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-206ENST00000426658 CMA1P23946 247 aa11.72□□□□□ -0.53
CTCFL-206ENST00000426658 IARSP41252 1262 aaKnown RBP11.72□□□□□ -0.53
CTCFL-206ENST00000426658 SART3Q15020 963 aaKnown RBP11.72□□□□□ -0.53
CTCFL-206ENST00000426658 PHKBQ93100 1093 aa11.72□□□□□ -0.53
CTCFL-206ENST00000426658 POLR3EQ9NVU0 708 aa11.72□□□□□ -0.53
CTCFL-206ENST00000426658 RNF113AO15541 343 aaKnown RBP11.72□□□□□ -0.53
CTCFL-206ENST00000426658 TADA3O75528 432 aa11.72□□□□□ -0.53
CTCFL-206ENST00000426658 HSPD1P10809 573 aaKnown RBP11.72□□□□□ -0.53
CTCFL-206ENST00000426658 NAPBQ9H115 298 aa11.72□□□□□ -0.53
CTCFL-206ENST00000426658 C3P01024 1663 aa11.72□□□□□ -0.53
CTCFL-206ENST00000426658 RIMS1Q86UR5 1692 aaKnown RBP11.72□□□□□ -0.53
CTCFL-206ENST00000426658 RAD51AP2Q09MP3 1159 aa11.72□□□□□ -0.53
CTCFL-206ENST00000426658 PNOCQ13519 176 aa11.72□□□□□ -0.53
CTCFL-206ENST00000426658 SLC4A8Q2Y0W8 1093 aa11.72□□□□□ -0.53
CTCFL-206ENST00000426658 TMEM67Q5HYA8 995 aa11.72□□□□□ -0.53
CTCFL-206ENST00000426658 SLC9C2Q5TAH2 1124 aa11.72□□□□□ -0.53
CTCFL-206ENST00000426658 FBXO18Q8NFZ0 1043 aa11.72□□□□□ -0.53
CTCFL-206ENST00000426658 ZKSCAN3Q9BRR0 538 aa11.72□□□□□ -0.53
CTCFL-206ENST00000426658 KCND1Q9NSA2 647 aa11.72□□□□□ -0.53
CTCFL-206ENST00000426658 FANCLQ9NW38 375 aa11.72□□□□□ -0.53
CTCFL-206ENST00000426658 VPS18Q9P253 973 aa11.72□□□□□ -0.53
CTCFL-206ENST00000426658 PUF60Q9UHX1 559 aaKnown RBP11.72□□□□□ -0.53
CTCFL-206ENST00000426658 MON2Q7Z3U7 1717 aa11.71□□□□□ -0.53
CTCFL-206ENST00000426658 IGKV5-2P06315 115 aa11.71□□□□□ -0.53
CTCFL-206ENST00000426658 STX17P56962 302 aa11.71□□□□□ -0.53
CTCFL-206ENST00000426658 FAM89AQ96GI7 184 aa11.71□□□□□ -0.53
CTCFL-206ENST00000426658 KAZALD1Q96I82 304 aa11.71□□□□□ -0.53
CTCFL-206ENST00000426658 LZTFL1Q9NQ48 299 aa11.71□□□□□ -0.53
CTCFL-206ENST00000426658 CAPN2P17655 700 aa11.71□□□□□ -0.53
CTCFL-206ENST00000426658 AFMP43652 599 aa11.71□□□□□ -0.53
CTCFL-206ENST00000426658 FAM182BQ5T319 152 aa11.71□□□□□ -0.53
CTCFL-206ENST00000426658 SMARCE1Q969G3 411 aa11.71□□□□□ -0.53
CTCFL-206ENST00000426658 LRRC24Q50LG9 513 aa11.71□□□□□ -0.54
CTCFL-206ENST00000426658 CC2D1AQ6P1N0 951 aaPredicted RBP11.71□□□□□ -0.54
CTCFL-206ENST00000426658 FCHSD1Q86WN1 690 aa11.71□□□□□ -0.54
CTCFL-206ENST00000426658 SLC12A7Q9Y666 1083 aa11.71□□□□□ -0.54
CTCFL-206ENST00000426658 CCDC175P0C221 793 aa11.7□□□□□ -0.54
CTCFL-206ENST00000426658 ADKP55263 362 aaKnown RBP11.7□□□□□ -0.54
CTCFL-206ENST00000426658 FILIP1LQ4L180 1135 aa11.7□□□□□ -0.54
CTCFL-206ENST00000426658 ZNF609O15014 1411 aa11.7□□□□□ -0.54
CTCFL-206ENST00000426658 PTPN12Q05209 780 aaKnown RBP11.7□□□□□ -0.54
CTCFL-206ENST00000426658 CCDC93Q567U6 631 aa11.7□□□□□ -0.54
CTCFL-206ENST00000426658 VSTM4Q8IW00 320 aa11.7□□□□□ -0.54
CTCFL-206ENST00000426658 PARD6BQ9BYG5 372 aa11.7□□□□□ -0.54
CTCFL-206ENST00000426658 ZNF335Q9H4Z2 1342 aaPredicted RBP11.7□□□□□ -0.54
CTCFL-206ENST00000426658 CEMIPQ8WUJ3 1361 aa11.7□□□□□ -0.54
CTCFL-206ENST00000426658 POTEB2H3BUK9 544 aa11.7□□□□□ -0.54
CTCFL-206ENST00000426658 IL15P40933 162 aaPredicted RBP11.7□□□□□ -0.54
CTCFL-206ENST00000426658 ST5P78524 1137 aa11.7□□□□□ -0.54
CTCFL-206ENST00000426658 ANKRD20A12PQ8NF67 263 aa11.7□□□□□ -0.54
CTCFL-206ENST00000426658 DPF2Q92785 391 aa11.7□□□□□ -0.54
CTCFL-206ENST00000426658 DESI2Q9BSY9 194 aa11.7□□□□□ -0.54
CTCFL-206ENST00000426658 SLAIN2Q9P270 581 aa11.7□□□□□ -0.54
CTCFL-206ENST00000426658 LRP2BPQ9P2M1 347 aa11.7□□□□□ -0.54
CTCFL-206ENST00000426658 PTPRUQ92729 1446 aa11.7□□□□□ -0.54
CTCFL-206ENST00000426658 SH3TC1Q8TE82 1336 aa11.69□□□□□ -0.54
CTCFL-206ENST00000426658 B4E1Z4 1266 aa11.69□□□□□ -0.54
CTCFL-206ENST00000426658 GYS2P54840 703 aa11.69□□□□□ -0.54
CTCFL-206ENST00000426658 CHMP4BP1P59074 171 aa11.69□□□□□ -0.54
CTCFL-206ENST00000426658 RABGGTAQ92696 567 aa11.69□□□□□ -0.54
CTCFL-206ENST00000426658 UBAC1Q9BSL1 405 aa11.69□□□□□ -0.54
CTCFL-206ENST00000426658 AKAP2Q9Y2D5 859 aa11.69□□□□□ -0.54
CTCFL-206ENST00000426658 PI16Q6UXB8 463 aa11.69□□□□□ -0.54
CTCFL-206ENST00000426658 TTLL7Q6ZT98 887 aa11.69□□□□□ -0.54
CTCFL-206ENST00000426658 PUS3Q9BZE2 481 aaKnown RBP11.69□□□□□ -0.54
CTCFL-206ENST00000426658 GBP3Q9H0R5 595 aa11.69□□□□□ -0.54
CTCFL-206ENST00000426658 RSPH14Q9UHP6 348 aa11.69□□□□□ -0.54
CTCFL-206ENST00000426658 PEAK1Q9H792 1746 aa11.69□□□□□ -0.54
CTCFL-206ENST00000426658 TMEM232C9JQI7 657 aa11.69□□□□□ -0.54
CTCFL-206ENST00000426658 IVLP07476 585 aa11.69□□□□□ -0.54
CTCFL-206ENST00000426658 EXOSC10Q01780 885 aaKnown RBP11.69□□□□□ -0.54
CTCFL-206ENST00000426658 CEP112Q8N8E3 955 aa11.69□□□□□ -0.54
CTCFL-206ENST00000426658 BTG4Q9NY30 223 aa11.69□□□□□ -0.54
CTCFL-206ENST00000426658 KCNH3Q9ULD8 1083 aa11.69□□□□□ -0.54
CTCFL-206ENST00000426658 ZBTB43O43298 467 aa11.69□□□□□ -0.54
CTCFL-206ENST00000426658 IPO7O95373 1038 aaKnown RBP11.69□□□□□ -0.54
CTCFL-206ENST00000426658 LONRF2Q1L5Z9 754 aa11.69□□□□□ -0.54
CTCFL-206ENST00000426658 SPECC1LQ69YQ0 1117 aa11.69□□□□□ -0.54
CTCFL-206ENST00000426658 TRMT44Q8IYL2 757 aaKnown RBP11.69□□□□□ -0.54
CTCFL-206ENST00000426658 NFE2L3Q9Y4A8 694 aa11.69□□□□□ -0.54
CTCFL-206ENST00000426658 XRN1Q8IZH2 1706 aaKnown RBP11.68□□□□□ -0.54
CTCFL-206ENST00000426658 DIP2BQ9P265 1576 aa11.68□□□□□ -0.54
CTCFL-206ENST00000426658 SLC39A14Q15043 492 aa11.68□□□□□ -0.54
CTCFL-206ENST00000426658 ZMYM1Q5SVZ6 1142 aa11.68□□□□□ -0.54
CTCFL-206ENST00000426658 HDXQ7Z353 690 aa11.68□□□□□ -0.54
CTCFL-206ENST00000426658 AIFM3Q96NN9 605 aa11.68□□□□□ -0.54
CTCFL-206ENST00000426658 TRMT112Q9UI30 125 aaKnown RBP11.68□□□□□ -0.54
CTCFL-206ENST00000426658 PARP3Q9Y6F1 533 aa11.68□□□□□ -0.54
CTCFL-206ENST00000426658 TXLNAP40222 546 aa11.68□□□□□ -0.54
CTCFL-206ENST00000426658 ZNF827Q17R98 1081 aa11.68□□□□□ -0.54
CTCFL-206ENST00000426658 DHX58Q96C10 678 aa11.68□□□□□ -0.54
CTCFL-206ENST00000426658 CLIC6Q96NY7 704 aa11.68□□□□□ -0.54
CTCFL-206ENST00000426658 SLC52A2Q9HAB3 445 aa11.68□□□□□ -0.54
CTCFL-206ENST00000426658 FAM53CQ9NYF3 392 aa11.68□□□□□ -0.54
CTCFL-206ENST00000426658 STX10O60499 249 aa11.68□□□□□ -0.54
CTCFL-206ENST00000426658 RHOXF2BP0C7M4 288 aa11.68□□□□□ -0.54
CTCFL-206ENST00000426658 ZAP70P43403 619 aa11.68□□□□□ -0.54
CTCFL-206ENST00000426658 KIF23Q02241 960 aaPredicted RBP11.68□□□□□ -0.54
CTCFL-206ENST00000426658 SSRP1Q08945 709 aaKnown RBP11.68□□□□□ -0.54
CTCFL-206ENST00000426658 BRD3Q15059 726 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms