RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 RARSP54136 660 aaKnown RBP12.54□□□□□ -0.4
GACAT3-201ENST00000426539 DIXDC1Q155Q3 683 aa12.54□□□□□ -0.4
GACAT3-201ENST00000426539 CCL15Q16663 113 aa12.54□□□□□ -0.4
GACAT3-201ENST00000426539 ATP2B3Q16720 1220 aa12.54□□□□□ -0.4
GACAT3-201ENST00000426539 ZKSCAN4Q969J2 545 aaPredicted RBP12.54□□□□□ -0.4
GACAT3-201ENST00000426539 API5Q9BZZ5 524 aaKnown RBP12.54□□□□□ -0.4
GACAT3-201ENST00000426539 DAGLAQ9Y4D2 1042 aa12.54□□□□□ -0.4
GACAT3-201ENST00000426539 CSADQ9Y600 493 aa12.54□□□□□ -0.4
GACAT3-201ENST00000426539 ADORA1P30542 326 aa12.53□□□□□ -0.4
GACAT3-201ENST00000426539 PHKA1P46020 1223 aa12.53□□□□□ -0.4
GACAT3-201ENST00000426539 GTF2A2P52657 109 aa12.53□□□□□ -0.4
GACAT3-201ENST00000426539 SP3Q02447 781 aa12.53□□□□□ -0.4
GACAT3-201ENST00000426539 NFIAQ12857 509 aa12.53□□□□□ -0.4
GACAT3-201ENST00000426539 CDC42EP5Q6NZY7 148 aa12.53□□□□□ -0.4
GACAT3-201ENST00000426539 ERO1AQ96HE7 468 aa12.53□□□□□ -0.4
GACAT3-201ENST00000426539 WRNIP1Q96S55 665 aa12.53□□□□□ -0.4
GACAT3-201ENST00000426539 COPRSQ9NQ92 184 aa12.53□□□□□ -0.4
GACAT3-201ENST00000426539 TMOD2Q9NZR1 351 aa12.53□□□□□ -0.4
GACAT3-201ENST00000426539 CEP126Q9P2H0 1117 aa12.53□□□□□ -0.4
GACAT3-201ENST00000426539 PTPN22Q9Y2R2 807 aa12.53□□□□□ -0.4
GACAT3-201ENST00000426539 RPAP1Q9BWH6 1393 aaPredicted RBP12.53□□□□□ -0.4
GACAT3-201ENST00000426539 CCER2I3L3R5 266 aa12.52□□□□□ -0.41
GACAT3-201ENST00000426539 IRF6O14896 467 aa12.52□□□□□ -0.41
GACAT3-201ENST00000426539 IL15P40933 162 aaPredicted RBP12.52□□□□□ -0.41
GACAT3-201ENST00000426539 INTS3Q68E01 1043 aaKnown RBP12.52□□□□□ -0.41
GACAT3-201ENST00000426539 MIGA2Q7L4E1 593 aa12.52□□□□□ -0.41
GACAT3-201ENST00000426539 ERO1BQ86YB8 467 aa12.52□□□□□ -0.41
GACAT3-201ENST00000426539 FAM198AQ9UFP1 575 aa12.52□□□□□ -0.41
GACAT3-201ENST00000426539 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.52□□□□□ -0.41
GACAT3-201ENST00000426539 SALL1Q9NSC2 1324 aa12.52□□□□□ -0.41
GACAT3-201ENST00000426539 TNRC18O15417 2968 aaPredicted RBP12.51□□□□□ -0.41
GACAT3-201ENST00000426539 POTEFA5A3E0 1075 aa12.51□□□□□ -0.41
GACAT3-201ENST00000426539 BTBD19C9JJ37 291 aa12.51□□□□□ -0.41
GACAT3-201ENST00000426539 INPP5BP32019 993 aa12.51□□□□□ -0.41
GACAT3-201ENST00000426539 TAF1CQ15572 869 aaPredicted RBP12.51□□□□□ -0.41
GACAT3-201ENST00000426539 ZFPM1Q8IX07 1006 aa12.51□□□□□ -0.41
GACAT3-201ENST00000426539 FAM151AQ8WW52 585 aa12.51□□□□□ -0.41
GACAT3-201ENST00000426539 EFCC1Q9HA90 598 aa12.51□□□□□ -0.41
GACAT3-201ENST00000426539 TNNQ9UQP3 1299 aa12.51□□□□□ -0.41
GACAT3-201ENST00000426539 SEMA3EO15041 775 aa12.5□□□□□ -0.41
GACAT3-201ENST00000426539 LDHBP07195 334 aaKnown RBP12.5□□□□□ -0.41
GACAT3-201ENST00000426539 TIMM10P62072 90 aa12.5□□□□□ -0.41
GACAT3-201ENST00000426539 TCP10Q12799 353 aa12.5□□□□□ -0.41
GACAT3-201ENST00000426539 PPIL2Q13356 520 aa12.5□□□□□ -0.41
GACAT3-201ENST00000426539 DCAF15Q66K64 600 aa12.5□□□□□ -0.41
GACAT3-201ENST00000426539 CCDC102BQ68D86 513 aa12.5□□□□□ -0.41
GACAT3-201ENST00000426539 ARHGAP45Q92619 1136 aa12.5□□□□□ -0.41
GACAT3-201ENST00000426539 ARMC5Q96C12 935 aa12.5□□□□□ -0.41
GACAT3-201ENST00000426539 ZNF341Q9BYN7 854 aa12.5□□□□□ -0.41
GACAT3-201ENST00000426539 ZFYVE28Q9HCC9 887 aa12.5□□□□□ -0.41
GACAT3-201ENST00000426539 USP40Q9NVE5 1235 aa12.5□□□□□ -0.41
GACAT3-201ENST00000426539 GNL3LQ9NVN8 582 aaKnown RBP12.5□□□□□ -0.41
GACAT3-201ENST00000426539 ZNF112Q9UJU3 913 aa12.5□□□□□ -0.41
GACAT3-201ENST00000426539 DENND2AQ9ULE3 1009 aa12.5□□□□□ -0.41
GACAT3-201ENST00000426539 HTTP42858 3142 aa12.49□□□□□ -0.41
GACAT3-201ENST00000426539 ATRNL1Q5VV63 1379 aa12.49□□□□□ -0.41
GACAT3-201ENST00000426539 CETPP11597 493 aa12.49□□□□□ -0.41
GACAT3-201ENST00000426539 SNAPC2Q13487 334 aa12.49□□□□□ -0.41
GACAT3-201ENST00000426539 MTX1Q13505 466 aa12.49□□□□□ -0.41
GACAT3-201ENST00000426539 RASGRF1Q13972 1273 aa12.49□□□□□ -0.41
GACAT3-201ENST00000426539 HOOK2Q96ED9 719 aa12.49□□□□□ -0.41
GACAT3-201ENST00000426539 RFX7Q2KHR2 1363 aa12.48□□□□□ -0.41
GACAT3-201ENST00000426539 GAKO14976 1311 aa12.48□□□□□ -0.41
GACAT3-201ENST00000426539 TLR2O60603 784 aa12.48□□□□□ -0.41
GACAT3-201ENST00000426539 PPATQ06203 517 aa12.48□□□□□ -0.41
GACAT3-201ENST00000426539 TFCP2Q12800 502 aa12.48□□□□□ -0.41
GACAT3-201ENST00000426539 MOGSQ13724 837 aa12.48□□□□□ -0.41
GACAT3-201ENST00000426539 PRPF38BQ5VTL8 546 aaKnown RBP12.48□□□□□ -0.41
GACAT3-201ENST00000426539 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.48□□□□□ -0.41
GACAT3-201ENST00000426539 ARHGAP39Q9C0H5 1083 aa12.48□□□□□ -0.41
GACAT3-201ENST00000426539 ZCCHC17Q9NP64 241 aaKnown RBP12.48□□□□□ -0.41
GACAT3-201ENST00000426539 HDAC5Q9UQL6 1122 aa12.48□□□□□ -0.41
GACAT3-201ENST00000426539 PTCH2Q9Y6C5 1203 aa12.48□□□□□ -0.41
GACAT3-201ENST00000426539 PDE4DIPQ5VU43 2346 aa12.48□□□□□ -0.41
GACAT3-201ENST00000426539 A0A1B0GUL7 405 aa12.47□□□□□ -0.41
GACAT3-201ENST00000426539 SRGAP3O43295 1099 aa12.47□□□□□ -0.41
GACAT3-201ENST00000426539 BCAR3O75815 825 aa12.47□□□□□ -0.41
GACAT3-201ENST00000426539 GNAI3P08754 354 aa12.47□□□□□ -0.41
GACAT3-201ENST00000426539 SLURP2P0DP57 97 aa12.47□□□□□ -0.41
GACAT3-201ENST00000426539 TRIM27P14373 513 aa12.47□□□□□ -0.41
GACAT3-201ENST00000426539 NOL9Q5SY16 702 aaKnown RBP12.47□□□□□ -0.41
GACAT3-201ENST00000426539 SH3BP5LQ7L8J4 393 aa12.47□□□□□ -0.41
GACAT3-201ENST00000426539 ZNF384Q8TF68 577 aa12.47□□□□□ -0.41
GACAT3-201ENST00000426539 XAGE2Q96GT9 111 aa12.47□□□□□ -0.41
GACAT3-201ENST00000426539 IDI2Q9BXS1 227 aa12.47□□□□□ -0.41
GACAT3-201ENST00000426539 KCNH4Q9UQ05 1017 aa12.47□□□□□ -0.41
GACAT3-201ENST00000426539 PDS5AQ29RF7 1337 aaKnown RBP12.46□□□□□ -0.41
GACAT3-201ENST00000426539 ADGRA2Q96PE1 1338 aa12.46□□□□□ -0.41
GACAT3-201ENST00000426539 PHF20L1A8MW92 1017 aa12.46□□□□□ -0.41
GACAT3-201ENST00000426539 PRR29P0C7W0 189 aa12.46□□□□□ -0.41
GACAT3-201ENST00000426539 EN2P19622 333 aaPredicted RBP12.46□□□□□ -0.41
GACAT3-201ENST00000426539 CTGFP29279 349 aa12.46□□□□□ -0.41
GACAT3-201ENST00000426539 RGS3P49796 1198 aa12.46□□□□□ -0.41
GACAT3-201ENST00000426539 C17orf99Q6UX52 265 aa12.46□□□□□ -0.41
GACAT3-201ENST00000426539 CHRDL2Q6WN34 429 aa12.46□□□□□ -0.41
GACAT3-201ENST00000426539 FAM163AQ96GL9 167 aaPredicted RBP12.46□□□□□ -0.41
GACAT3-201ENST00000426539 ZNF333Q96JL9 665 aa12.46□□□□□ -0.41
GACAT3-201ENST00000426539 DDX4Q9NQI0 724 aaKnown RBP12.46□□□□□ -0.41
GACAT3-201ENST00000426539 PNMA6EA0A0J9YXQ4 647 aa12.45□□□□□ -0.42
GACAT3-201ENST00000426539 DDTLA6NHG4 134 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms