RNA–Protein interactions for RNA: ENST00000424924.5

SHANK2-206, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 6,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-206ENST00000424924 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.83□□□□□ -0.52
SHANK2-206ENST00000424924 HMG20BQ9P0W2 317 aa11.83□□□□□ -0.52
SHANK2-206ENST00000424924 MSANTD4Q8NCY6 345 aa11.83□□□□□ -0.52
SHANK2-206ENST00000424924 SPC25Q9HBM1 224 aa11.83□□□□□ -0.52
SHANK2-206ENST00000424924 CTNND2Q9UQB3 1225 aa11.83□□□□□ -0.52
SHANK2-206ENST00000424924 LAMC3Q9Y6N6 1575 aa11.83□□□□□ -0.52
SHANK2-206ENST00000424924 MCM3P25205 808 aa11.83□□□□□ -0.52
SHANK2-206ENST00000424924 IFT81Q8WYA0 676 aa11.83□□□□□ -0.52
SHANK2-206ENST00000424924 KCNK9Q9NPC2 374 aa11.83□□□□□ -0.52
SHANK2-206ENST00000424924 DENND2AQ9ULE3 1009 aa11.83□□□□□ -0.52
SHANK2-206ENST00000424924 TRPC6Q9Y210 931 aa11.83□□□□□ -0.52
SHANK2-206ENST00000424924 PTPRKQ15262 1439 aa11.83□□□□□ -0.52
SHANK2-206ENST00000424924 TRIM75PA6NK02 468 aa11.83□□□□□ -0.52
SHANK2-206ENST00000424924 GPATCH11Q8N954 259 aa11.83□□□□□ -0.52
SHANK2-206ENST00000424924 GLG1Q92896 1179 aa11.83□□□□□ -0.52
SHANK2-206ENST00000424924 RASAL2Q9UJF2 1139 aa11.83□□□□□ -0.52
SHANK2-206ENST00000424924 KCNA6P17658 529 aa11.82□□□□□ -0.52
SHANK2-206ENST00000424924 CCDC6Q16204 474 aa11.82□□□□□ -0.52
SHANK2-206ENST00000424924 IPO4Q8TEX9 1081 aaKnown RBP11.82□□□□□ -0.52
SHANK2-206ENST00000424924 BBXQ8WY36 941 aaPredicted RBP11.82□□□□□ -0.52
SHANK2-206ENST00000424924 NCOA1Q15788 1441 aa11.82□□□□□ -0.52
SHANK2-206ENST00000424924 RIMS2Q9UQ26 1411 aa11.82□□□□□ -0.52
SHANK2-206ENST00000424924 TESPA1A2RU30 521 aaPredicted RBP11.82□□□□□ -0.52
SHANK2-206ENST00000424924 PIK3AP1Q6ZUJ8 805 aa11.82□□□□□ -0.52
SHANK2-206ENST00000424924 NBPF3Q9H094 633 aa11.82□□□□□ -0.52
SHANK2-206ENST00000424924 DDX19AQ9NUU7 478 aaKnown RBP11.82□□□□□ -0.52
SHANK2-206ENST00000424924 FRMPD2Q68DX3 1309 aaPredicted RBP11.82□□□□□ -0.52
SHANK2-206ENST00000424924 CUL4BQ13620 913 aa11.82□□□□□ -0.52
SHANK2-206ENST00000424924 TSTA3Q13630 321 aaPredicted RBP11.82□□□□□ -0.52
SHANK2-206ENST00000424924 DNAJC21Q5F1R6 531 aaKnown RBP11.82□□□□□ -0.52
SHANK2-206ENST00000424924 BIVM-ERCC5R4GMW8 1640 aa11.82□□□□□ -0.52
SHANK2-206ENST00000424924 RNMTO43148 476 aaKnown RBP11.82□□□□□ -0.52
SHANK2-206ENST00000424924 KCNQ4P56696 695 aa11.82□□□□□ -0.52
SHANK2-206ENST00000424924 CFAP157Q5JU67 520 aa11.82□□□□□ -0.52
SHANK2-206ENST00000424924 MTERF4Q7Z6M4 381 aaKnown RBP11.82□□□□□ -0.52
SHANK2-206ENST00000424924 C2CD5Q86YS7 1000 aa11.82□□□□□ -0.52
SHANK2-206ENST00000424924 RDH13Q8NBN7 331 aa11.82□□□□□ -0.52
SHANK2-206ENST00000424924 LEO1Q8WVC0 666 aaPredicted RBP11.82□□□□□ -0.52
SHANK2-206ENST00000424924 FAM193BQ96PV7 902 aaPredicted RBP11.82□□□□□ -0.52
SHANK2-206ENST00000424924 QTRT2Q9H974 415 aaKnown RBP11.81□□□□□ -0.52
SHANK2-206ENST00000424924 TLDC2A0PJX2 215 aa11.81□□□□□ -0.52
SHANK2-206ENST00000424924 PRPF6O94906 941 aaKnown RBP11.81□□□□□ -0.52
SHANK2-206ENST00000424924 GNA11P29992 359 aa11.81□□□□□ -0.52
SHANK2-206ENST00000424924 SMTNP53814 917 aa11.81□□□□□ -0.52
SHANK2-206ENST00000424924 C6orf163Q5TEZ5 329 aa11.81□□□□□ -0.52
SHANK2-206ENST00000424924 GSDMBQ8TAX9 411 aa11.81□□□□□ -0.52
SHANK2-206ENST00000424924 AFG3L2Q9Y4W6 797 aa11.81□□□□□ -0.52
SHANK2-206ENST00000424924 ARHGEF35A5YM69 484 aa11.81□□□□□ -0.52
SHANK2-206ENST00000424924 UNC13AQ9UPW8 1703 aa11.81□□□□□ -0.52
SHANK2-206ENST00000424924 IGHDP01880 384 aa11.81□□□□□ -0.52
SHANK2-206ENST00000424924 GNAT2P19087 354 aa11.81□□□□□ -0.52
SHANK2-206ENST00000424924 CYLC1P35663 651 aaPredicted RBP11.81□□□□□ -0.52
SHANK2-206ENST00000424924 FAM47AQ5JRC9 791 aa11.81□□□□□ -0.52
SHANK2-206ENST00000424924 MYL10Q9BUA6 226 aa11.81□□□□□ -0.52
SHANK2-206ENST00000424924 CGNQ9P2M7 1197 aaKnown RBP11.81□□□□□ -0.52
SHANK2-206ENST00000424924 PRKAG2Q9UGJ0 569 aa11.81□□□□□ -0.52
SHANK2-206ENST00000424924 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.81□□□□□ -0.52
SHANK2-206ENST00000424924 ABCC11Q96J66 1382 aa11.81□□□□□ -0.52
SHANK2-206ENST00000424924 BSPRYQ5W0U4 402 aa11.81□□□□□ -0.52
SHANK2-206ENST00000424924 TRAF5O00463 557 aa11.8□□□□□ -0.52
SHANK2-206ENST00000424924 ARHGEF16Q5VV41 709 aa11.8□□□□□ -0.52
SHANK2-206ENST00000424924 KIAA0825Q8IV33 1275 aa11.8□□□□□ -0.52
SHANK2-206ENST00000424924 MLXIPQ9HAP2 919 aa11.8□□□□□ -0.52
SHANK2-206ENST00000424924 EPB41P11171 864 aaKnown RBP11.8□□□□□ -0.52
SHANK2-206ENST00000424924 DNM1Q05193 864 aaKnown RBP11.8□□□□□ -0.52
SHANK2-206ENST00000424924 USP40Q9NVE5 1235 aa11.8□□□□□ -0.52
SHANK2-206ENST00000424924 GUCA1BQ9UMX6 200 aa11.8□□□□□ -0.52
SHANK2-206ENST00000424924 SLC1A4P43007 532 aa11.8□□□□□ -0.52
SHANK2-206ENST00000424924 MAPKBP1O60336 1514 aa11.8□□□□□ -0.52
SHANK2-206ENST00000424924 SYNJ2BP-COX16A0A087WUM0 186 aa11.8□□□□□ -0.52
SHANK2-206ENST00000424924 CPA1P15085 419 aa11.8□□□□□ -0.52
SHANK2-206ENST00000424924 LRMPQ12912 555 aa11.8□□□□□ -0.52
SHANK2-206ENST00000424924 SULF1Q8IWU6 871 aa11.8□□□□□ -0.52
SHANK2-206ENST00000424924 COX16Q9P0S2 106 aa11.8□□□□□ -0.52
SHANK2-206ENST00000424924 CLRN2A0PK11 232 aa11.8□□□□□ -0.52
SHANK2-206ENST00000424924 RIOK3O14730 519 aaKnown RBP11.8□□□□□ -0.52
SHANK2-206ENST00000424924 GTF2F1P35269 517 aaKnown RBP eCLIP11.8□□□□□ -0.52
SHANK2-206ENST00000424924 ITKQ08881 620 aa11.8□□□□□ -0.52
SHANK2-206ENST00000424924 SF3A3Q12874 501 aaKnown RBP eCLIP11.8□□□□□ -0.526e-6■□□□□ 10.9
SHANK2-206ENST00000424924 TBC1D10BQ4KMP7 808 aaPredicted RBP11.8□□□□□ -0.52
SHANK2-206ENST00000424924 DYMQ7RTS9 669 aa11.8□□□□□ -0.52
SHANK2-206ENST00000424924 TMX3Q96JJ7 454 aa11.8□□□□□ -0.52
SHANK2-206ENST00000424924 RIOK1Q9BRS2 568 aaKnown RBP11.8□□□□□ -0.52
SHANK2-206ENST00000424924 DNAJC25Q9H1X3 360 aa11.8□□□□□ -0.52
SHANK2-206ENST00000424924 TTF2Q9UNY4 1162 aaKnown RBP11.8□□□□□ -0.52
SHANK2-206ENST00000424924 UHRF1BP1LA0JNW5 1464 aa11.8□□□□□ -0.52
SHANK2-206ENST00000424924 PPP1R16BQ96T49 567 aa11.8□□□□□ -0.52
SHANK2-206ENST00000424924 FAM204AQ9H8W3 233 aa11.8□□□□□ -0.52
SHANK2-206ENST00000424924 KIF9Q9HAQ2 790 aa11.8□□□□□ -0.52
SHANK2-206ENST00000424924 GOLGA6L9A6NEM1 432 aa11.79□□□□□ -0.52
SHANK2-206ENST00000424924 DNM2P50570 870 aa11.79□□□□□ -0.52
SHANK2-206ENST00000424924 CCDC14Q49A88 953 aa11.79□□□□□ -0.52
SHANK2-206ENST00000424924 DCAF5Q96JK2 942 aa11.79□□□□□ -0.52
SHANK2-206ENST00000424924 IRAK4Q9NWZ3 460 aa11.79□□□□□ -0.52
SHANK2-206ENST00000424924 C14orf93Q9H972 538 aaKnown RBP11.79□□□□□ -0.52
SHANK2-206ENST00000424924 RTL1A6NKG5 1358 aa11.79□□□□□ -0.52
SHANK2-206ENST00000424924 PLEKHH1Q9ULM0 1364 aa11.79□□□□□ -0.52
SHANK2-206ENST00000424924 SPECC1LQ69YQ0 1117 aa11.79□□□□□ -0.52
SHANK2-206ENST00000424924 CASC4Q6P4E1 433 aa11.79□□□□□ -0.52
SHANK2-206ENST00000424924 SV2BQ7L1I2 683 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms