RNA–Protein interactions for RNA: ENST00000423575.5

LINC00539-202, long intergenic non-protein coding RNA 539, humanhuman

TSL 3 BASIC

Gene LINC00539, Length 699 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-202ENST00000423575 TDRD3Q9H7E2 651 aaKnown RBP14.63□□□□□ -0.07
LINC00539-202ENST00000423575 CLRN2A0PK11 232 aa14.62□□□□□ -0.07
LINC00539-202ENST00000423575 ZFYP08048 801 aaPredicted RBP14.62□□□□□ -0.07
LINC00539-202ENST00000423575 RHBDL3P58872 404 aa14.62□□□□□ -0.07
LINC00539-202ENST00000423575 SPDYE2Q495Y8 402 aa14.62□□□□□ -0.07
LINC00539-202ENST00000423575 CDC42EP5Q6NZY7 148 aa14.62□□□□□ -0.07
LINC00539-202ENST00000423575 AATFQ9NY61 560 aaKnown RBP eCLIP14.62□□□□□ -0.07
LINC00539-202ENST00000423575 GGA3Q9NZ52 723 aa14.62□□□□□ -0.07
LINC00539-202ENST00000423575 ZNF70Q9UC06 446 aaPredicted RBP14.62□□□□□ -0.07
LINC00539-202ENST00000423575 PPP4CP60510 307 aa14.61□□□□□ -0.07
LINC00539-202ENST00000423575 DYNLL1P63167 89 aaKnown RBP14.61□□□□□ -0.07
LINC00539-202ENST00000423575 LRRFIP1Q32MZ4 808 aaKnown RBP14.61□□□□□ -0.07
LINC00539-202ENST00000423575 ZMYM1Q5SVZ6 1142 aa14.61□□□□□ -0.07
LINC00539-202ENST00000423575 APPBP2Q92624 585 aa14.61□□□□□ -0.07
LINC00539-202ENST00000423575 OSBP2Q969R2 916 aa14.61□□□□□ -0.07
LINC00539-202ENST00000423575 RIOK1Q9BRS2 568 aaKnown RBP14.61□□□□□ -0.07
LINC00539-202ENST00000423575 PGAP2Q9UHJ9 254 aa14.61□□□□□ -0.07
LINC00539-202ENST00000423575 A0A0D9SFI3 127 aa14.6□□□□□ -0.07
LINC00539-202ENST00000423575 MBD4O95243 580 aa14.6□□□□□ -0.07
LINC00539-202ENST00000423575 CACNB3P54284 484 aa14.6□□□□□ -0.07
LINC00539-202ENST00000423575 ANGEL2Q5VTE6 544 aaKnown RBP14.6□□□□□ -0.07
LINC00539-202ENST00000423575 LDHDQ86WU2 507 aa14.6□□□□□ -0.07
LINC00539-202ENST00000423575 TICAM2Q86XR7 235 aa14.6□□□□□ -0.07
LINC00539-202ENST00000423575 SH3RF3Q8TEJ3 882 aaPredicted RBP14.6□□□□□ -0.07
LINC00539-202ENST00000423575 ZC3H15Q8WU90 426 aaKnown RBP14.6□□□□□ -0.07
LINC00539-202ENST00000423575 FAM227BQ96M60 508 aa14.6□□□□□ -0.07
LINC00539-202ENST00000423575 SEC62Q99442 399 aaKnown RBP14.6□□□□□ -0.07
LINC00539-202ENST00000423575 PUS7LQ9H0K6 701 aaKnown RBP14.6□□□□□ -0.07
LINC00539-202ENST00000423575 USP40Q9NVE5 1235 aa14.6□□□□□ -0.07
LINC00539-202ENST00000423575 MYH2Q9UKX2 1941 aa14.6□□□□□ -0.07
LINC00539-202ENST00000423575 MAGEB6P1A0A0J9YX57 407 aa14.59□□□□□ -0.07
LINC00539-202ENST00000423575 M0R2C6 588 aa14.59□□□□□ -0.07
LINC00539-202ENST00000423575 MYO1BO43795 1136 aa14.59□□□□□ -0.07
LINC00539-202ENST00000423575 BAG3O95817 575 aa14.59□□□□□ -0.07
LINC00539-202ENST00000423575 NFIAQ12857 509 aa14.59□□□□□ -0.07
LINC00539-202ENST00000423575 NMIQ13287 307 aaPredicted RBP14.59□□□□□ -0.07
LINC00539-202ENST00000423575 LCORLQ8N3X6 602 aa14.59□□□□□ -0.07
LINC00539-202ENST00000423575 NOL10Q9BSC4 688 aaKnown RBP14.59□□□□□ -0.07
LINC00539-202ENST00000423575 ARMT1Q9H993 441 aa14.59□□□□□ -0.07
LINC00539-202ENST00000423575 VEZTQ9HBM0 779 aa14.59□□□□□ -0.07
LINC00539-202ENST00000423575 SCAF8Q9UPN6 1271 aaKnown RBP14.59□□□□□ -0.07
LINC00539-202ENST00000423575 WDHD1O75717 1129 aaPredicted RBP14.58□□□□□ -0.08
LINC00539-202ENST00000423575 MAP1SQ66K74 1059 aaPredicted RBP14.58□□□□□ -0.08
LINC00539-202ENST00000423575 TEX11Q8IYF3 940 aa14.58□□□□□ -0.08
LINC00539-202ENST00000423575 DIAPH3Q9NSV4 1193 aa14.58□□□□□ -0.08
LINC00539-202ENST00000423575 TMOD2Q9NZR1 351 aa14.58□□□□□ -0.08
LINC00539-202ENST00000423575 CLEC11AQ9Y240 323 aa14.58□□□□□ -0.08
LINC00539-202ENST00000423575 PITPNM2Q9BZ72 1349 aa14.58□□□□□ -0.08
LINC00539-202ENST00000423575 MYH7P12883 1935 aa14.58□□□□□ -0.08
LINC00539-202ENST00000423575 TCP10L2B9ZVM9 353 aa14.57□□□□□ -0.08
LINC00539-202ENST00000423575 HIP1O00291 1037 aa14.57□□□□□ -0.08
LINC00539-202ENST00000423575 PLCG2P16885 1265 aa14.57□□□□□ -0.08
LINC00539-202ENST00000423575 CHMLP26374 656 aa14.57□□□□□ -0.08
LINC00539-202ENST00000423575 CCDC129Q6ZRS4 1044 aa14.57□□□□□ -0.08
LINC00539-202ENST00000423575 APOBEC3FQ8IUX4 373 aaKnown RBP14.57□□□□□ -0.08
LINC00539-202ENST00000423575 AIDAQ96BJ3 306 aa14.57□□□□□ -0.08
LINC00539-202ENST00000423575 DCPSQ96C86 337 aaKnown RBP14.57□□□□□ -0.08
LINC00539-202ENST00000423575 DDX4Q9NQI0 724 aaKnown RBP14.57□□□□□ -0.08
LINC00539-202ENST00000423575 FAM198AQ9UFP1 575 aa14.57□□□□□ -0.08
LINC00539-202ENST00000423575 CNTNAP1P78357 1384 aa14.57□□□□□ -0.08
LINC00539-202ENST00000423575 ADM5C9JUS6 153 aa14.56□□□□□ -0.08
LINC00539-202ENST00000423575 GPAA1O43292 621 aa14.56□□□□□ -0.08
LINC00539-202ENST00000423575 FKBP1CQ5VVH2 108 aa14.56□□□□□ -0.08
LINC00539-202ENST00000423575 CHADLQ6NUI6 762 aa14.56□□□□□ -0.08
LINC00539-202ENST00000423575 CWC27Q6UX04 472 aaKnown RBP14.56□□□□□ -0.08
LINC00539-202ENST00000423575 KRT26Q7Z3Y9 468 aa14.56□□□□□ -0.08
LINC00539-202ENST00000423575 ZNF589Q86UQ0 364 aaPredicted RBP14.56□□□□□ -0.08
LINC00539-202ENST00000423575 CERS3Q8IU89 383 aa14.56□□□□□ -0.08
LINC00539-202ENST00000423575 STRBPQ96SI9 672 aaKnown RBP14.56□□□□□ -0.08
LINC00539-202ENST00000423575 IDI2Q9BXS1 227 aa14.56□□□□□ -0.08
LINC00539-202ENST00000423575 GLIS2Q9BZE0 524 aaPredicted RBP14.56□□□□□ -0.08
LINC00539-202ENST00000423575 IL25Q9H293 177 aa14.56□□□□□ -0.08
LINC00539-202ENST00000423575 HELLSQ9NRZ9 838 aa14.56□□□□□ -0.08
LINC00539-202ENST00000423575 PRKAB2O43741 272 aa14.55□□□□□ -0.08
LINC00539-202ENST00000423575 RASA3Q14644 834 aa14.55□□□□□ -0.08
LINC00539-202ENST00000423575 DLK2Q6UY11 383 aa14.55□□□□□ -0.08
LINC00539-202ENST00000423575 USP48Q86UV5 1035 aa14.55□□□□□ -0.08
LINC00539-202ENST00000423575 SULF1Q8IWU6 871 aa14.55□□□□□ -0.08
LINC00539-202ENST00000423575 TGFBRAP1Q8WUH2 860 aa14.55□□□□□ -0.08
LINC00539-202ENST00000423575 CRNKL1Q9BZJ0 848 aaKnown RBP14.55□□□□□ -0.08
LINC00539-202ENST00000423575 DEFB129Q9H1M3 183 aa14.55□□□□□ -0.08
LINC00539-202ENST00000423575 CDC45O75419 566 aa14.54□□□□□ -0.08
LINC00539-202ENST00000423575 TOMM70O94826 608 aa14.54□□□□□ -0.08
LINC00539-202ENST00000423575 TCP10Q12799 353 aa14.54□□□□□ -0.08
LINC00539-202ENST00000423575 PICALMQ13492 652 aa14.54□□□□□ -0.08
LINC00539-202ENST00000423575 TNFAIP1Q13829 316 aa14.54□□□□□ -0.08
LINC00539-202ENST00000423575 MCMDC2Q4G0Z9 681 aa14.54□□□□□ -0.08
LINC00539-202ENST00000423575 MAPKAPK5Q8IW41 473 aa14.54□□□□□ -0.08
LINC00539-202ENST00000423575 CDAN1Q8IWY9 1227 aa14.54□□□□□ -0.08
LINC00539-202ENST00000423575 ZFPM1Q8IX07 1006 aa14.54□□□□□ -0.08
LINC00539-202ENST00000423575 RBM46Q8TBY0 533 aaKnown RBP14.54□□□□□ -0.08
LINC00539-202ENST00000423575 SDR42E1Q8WUS8 393 aa14.54□□□□□ -0.08
LINC00539-202ENST00000423575 TMEM39BQ9GZU3 492 aa14.54□□□□□ -0.08
LINC00539-202ENST00000423575 SLC4A4Q9Y6R1 1079 aa14.54□□□□□ -0.08
LINC00539-202ENST00000423575 FLT1P17948 1338 aa14.54□□□□□ -0.08
LINC00539-202ENST00000423575 ECM29Q5VYK3 1845 aa14.54□□□□□ -0.08
LINC00539-202ENST00000423575 AK9Q5TCS8 1911 aa14.54□□□□□ -0.08
LINC00539-202ENST00000423575 RPAP1Q9BWH6 1393 aaPredicted RBP14.53□□□□□ -0.08
LINC00539-202ENST00000423575 CCDC171Q6TFL3 1326 aa14.53□□□□□ -0.08
LINC00539-202ENST00000423575 RAD50Q92878 1312 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms