RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 LIFRP42702 1097 aa16.1■□□□□ 0.17
CDCA3-202ENST00000422785 CTDSPL2Q05D32 466 aa16.1■□□□□ 0.17
CDCA3-202ENST00000422785 CELF1Q92879 486 aaKnown RBP16.1■□□□□ 0.17
CDCA3-202ENST00000422785 LY9Q9HBG7 655 aa16.1■□□□□ 0.17
CDCA3-202ENST00000422785 SRP68Q9UHB9 627 aaKnown RBP16.1■□□□□ 0.17
CDCA3-202ENST00000422785 USP25Q9UHP3 1055 aa16.1■□□□□ 0.17
CDCA3-202ENST00000422785 CCNL1Q9UK58 526 aaPredicted RBP16.1■□□□□ 0.17
CDCA3-202ENST00000422785 KDM4AO75164 1064 aa16.09■□□□□ 0.17
CDCA3-202ENST00000422785 TDO2P48775 406 aa16.09■□□□□ 0.17
CDCA3-202ENST00000422785 TYRO3Q06418 890 aa16.09■□□□□ 0.17
CDCA3-202ENST00000422785 MFSD6Q6ZSS7 791 aa16.09■□□□□ 0.17
CDCA3-202ENST00000422785 ZMYND15Q9H091 742 aa16.09■□□□□ 0.17
CDCA3-202ENST00000422785 INCENPQ9NQS7 918 aa16.09■□□□□ 0.17
CDCA3-202ENST00000422785 ZSWIM5Q9P217 1185 aa16.09■□□□□ 0.17
CDCA3-202ENST00000422785 IQSEC3Q9UPP2 1182 aaPredicted RBP16.09■□□□□ 0.17
CDCA3-202ENST00000422785 CYP7A1P22680 504 aa16.09■□□□□ 0.17
CDCA3-202ENST00000422785 TMEM67Q5HYA8 995 aa16.09■□□□□ 0.17
CDCA3-202ENST00000422785 BRAPQ7Z569 592 aa16.09■□□□□ 0.17
CDCA3-202ENST00000422785 NBPF5PQ86XG9 351 aaPredicted RBP16.09■□□□□ 0.17
CDCA3-202ENST00000422785 STAG1Q8WVM7 1258 aa16.09■□□□□ 0.17
CDCA3-202ENST00000422785 NLRP3Q96P20 1036 aa16.09■□□□□ 0.17
CDCA3-202ENST00000422785 RTEL1Q9NZ71 1219 aa16.09■□□□□ 0.17
CDCA3-202ENST00000422785 WTIPA6NIX2 430 aaPredicted RBP16.09■□□□□ 0.17
CDCA3-202ENST00000422785 ZBTB43O43298 467 aa16.09■□□□□ 0.17
CDCA3-202ENST00000422785 RPS8P62241 208 aaKnown RBP16.09■□□□□ 0.17
CDCA3-202ENST00000422785 OTUD7BQ6GQQ9 843 aa16.09■□□□□ 0.17
CDCA3-202ENST00000422785 CPLX2Q6PUV4 134 aaKnown RBP16.09■□□□□ 0.17
CDCA3-202ENST00000422785 CKAP2LQ8IYA6 745 aa16.09■□□□□ 0.17
CDCA3-202ENST00000422785 MIGA1Q8NAN2 632 aa16.09■□□□□ 0.17
CDCA3-202ENST00000422785 SENP2Q9HC62 589 aa16.09■□□□□ 0.17
CDCA3-202ENST00000422785 RTCBQ9Y3I0 505 aaKnown RBP16.09■□□□□ 0.17
CDCA3-202ENST00000422785 TACC3Q9Y6A5 838 aa16.09■□□□□ 0.17
CDCA3-202ENST00000422785 MRVI1Q9Y6F6 885 aa16.09■□□□□ 0.17
CDCA3-202ENST00000422785 NFXL1Q6ZNB6 911 aa16.08■□□□□ 0.16
CDCA3-202ENST00000422785 FAM200AQ8TCP9 573 aa16.08■□□□□ 0.16
CDCA3-202ENST00000422785 FAM84BQ96KN1 310 aaPredicted RBP16.08■□□□□ 0.16
CDCA3-202ENST00000422785 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.08■□□□□ 0.16
CDCA3-202ENST00000422785 RAI14Q9P0K7 980 aa16.08■□□□□ 0.16
CDCA3-202ENST00000422785 ABCF2Q9UG63 623 aa16.08■□□□□ 0.16
CDCA3-202ENST00000422785 ZKSCAN5Q9Y2L8 839 aa16.08■□□□□ 0.16
CDCA3-202ENST00000422785 COL1A1P02452 1464 aaPredicted RBP16.08■□□□□ 0.16
CDCA3-202ENST00000422785 ADCY5O95622 1261 aa16.08■□□□□ 0.16
CDCA3-202ENST00000422785 TPTE2Q6XPS3 522 aa16.08■□□□□ 0.16
CDCA3-202ENST00000422785 ADGRA1Q86SQ6 560 aa16.08■□□□□ 0.16
CDCA3-202ENST00000422785 VPS37DQ86XT2 251 aa16.08■□□□□ 0.16
CDCA3-202ENST00000422785 CCAR1Q8IX12 1150 aaKnown RBP16.08■□□□□ 0.16
CDCA3-202ENST00000422785 MTA3Q9BTC8 594 aa16.08■□□□□ 0.16
CDCA3-202ENST00000422785 IFIT3O14879 490 aaKnown RBP16.07■□□□□ 0.16
CDCA3-202ENST00000422785 CDC27P30260 824 aa16.07■□□□□ 0.16
CDCA3-202ENST00000422785 SEMA3EO15041 775 aa16.07■□□□□ 0.16
CDCA3-202ENST00000422785 FBXO33Q7Z6M2 555 aa16.07■□□□□ 0.16
CDCA3-202ENST00000422785 MICU3Q86XE3 530 aa16.07■□□□□ 0.16
CDCA3-202ENST00000422785 RNF41Q9H4P4 317 aaPredicted RBP16.07■□□□□ 0.16
CDCA3-202ENST00000422785 MAGEB6P1A0A0J9YX57 407 aa16.06■□□□□ 0.16
CDCA3-202ENST00000422785 ME1P48163 572 aa16.06■□□□□ 0.16
CDCA3-202ENST00000422785 NTRK3Q16288 839 aa16.06■□□□□ 0.16
CDCA3-202ENST00000422785 ARHGEF1Q92888 912 aaKnown RBP16.06■□□□□ 0.16
CDCA3-202ENST00000422785 ANKRD2Q9GZV1 360 aa16.06■□□□□ 0.16
CDCA3-202ENST00000422785 POLR3EQ9NVU0 708 aa16.06■□□□□ 0.16
CDCA3-202ENST00000422785 SLC12A7Q9Y666 1083 aa16.06■□□□□ 0.16
CDCA3-202ENST00000422785 PTMAP06454 111 aaKnown RBP16.06■□□□□ 0.16
CDCA3-202ENST00000422785 KIF23Q02241 960 aaPredicted RBP16.06■□□□□ 0.16
CDCA3-202ENST00000422785 CCDC73Q6ZRK6 1079 aa16.06■□□□□ 0.16
CDCA3-202ENST00000422785 FAM217BQ9NTX9 383 aaPredicted RBP16.06■□□□□ 0.16
CDCA3-202ENST00000422785 LY75O60449 1722 aa16.06■□□□□ 0.16
CDCA3-202ENST00000422785 CACNA1SQ13698 1873 aa16.06■□□□□ 0.16
CDCA3-202ENST00000422785 CCDC69A6NI79 296 aa16.05■□□□□ 0.16
CDCA3-202ENST00000422785 GOLGA8AA7E2F4 631 aa16.05■□□□□ 0.16
CDCA3-202ENST00000422785 CTAGE5O15320 804 aa16.05■□□□□ 0.16
CDCA3-202ENST00000422785 ZNF500O60304 480 aaPredicted RBP16.05■□□□□ 0.16
CDCA3-202ENST00000422785 POLR3DP05423 398 aaPredicted RBP16.05■□□□□ 0.16
CDCA3-202ENST00000422785 RXRAP19793 462 aa16.05■□□□□ 0.16
CDCA3-202ENST00000422785 SNW1Q13573 536 aaKnown RBP16.05■□□□□ 0.16
CDCA3-202ENST00000422785 FAM182BQ5T319 152 aa16.05■□□□□ 0.16
CDCA3-202ENST00000422785 MYSM1Q5VVJ2 828 aa16.05■□□□□ 0.16
CDCA3-202ENST00000422785 SASS6Q6UVJ0 657 aa16.05■□□□□ 0.16
CDCA3-202ENST00000422785 LINC00301Q8NCQ3 95 aa16.05■□□□□ 0.16
CDCA3-202ENST00000422785 RIOK1Q9BRS2 568 aaKnown RBP16.05■□□□□ 0.16
CDCA3-202ENST00000422785 ALG1Q9BT22 464 aa16.05■□□□□ 0.16
CDCA3-202ENST00000422785 GOLPH3LQ9H4A5 285 aa16.05■□□□□ 0.16
CDCA3-202ENST00000422785 GJB4Q9NTQ9 266 aa16.05■□□□□ 0.16
CDCA3-202ENST00000422785 NID2Q14112 1375 aa16.05■□□□□ 0.16
CDCA3-202ENST00000422785 TAF1LQ8IZX4 1826 aa16.05■□□□□ 0.16
CDCA3-202ENST00000422785 PDS5AQ29RF7 1337 aaKnown RBP16.05■□□□□ 0.16
CDCA3-202ENST00000422785 YEATS4O95619 227 aa16.05■□□□□ 0.16
CDCA3-202ENST00000422785 FAM160A1Q05DH4 1040 aa16.05■□□□□ 0.16
CDCA3-202ENST00000422785 PPARAQ07869 468 aa16.05■□□□□ 0.16
CDCA3-202ENST00000422785 SART3Q15020 963 aaKnown RBP16.05■□□□□ 0.16
CDCA3-202ENST00000422785 ENGASEQ8NFI3 743 aa16.05■□□□□ 0.16
CDCA3-202ENST00000422785 KCNG4Q8TDN1 519 aa16.05■□□□□ 0.16
CDCA3-202ENST00000422785 ANAPC4Q9UJX5 808 aa16.05■□□□□ 0.16
CDCA3-202ENST00000422785 PCDHA7Q9UN72 937 aa16.05■□□□□ 0.16
CDCA3-202ENST00000422785 IARSP41252 1262 aaKnown RBP16.04■□□□□ 0.16
CDCA3-202ENST00000422785 ADALQ6DHV7 355 aa16.04■□□□□ 0.16
CDCA3-202ENST00000422785 SYNE3Q6ZMZ3 975 aa16.04■□□□□ 0.16
CDCA3-202ENST00000422785 AMIGO3Q86WK7 504 aa16.04■□□□□ 0.16
CDCA3-202ENST00000422785 A0A1W2PQ27 194 aa16.04■□□□□ 0.16
CDCA3-202ENST00000422785 A0A1W2PQ64 194 aa16.04■□□□□ 0.16
CDCA3-202ENST00000422785 A0A1W2PQD8 194 aa16.04■□□□□ 0.16
CDCA3-202ENST00000422785 KIF28PB7ZC32 967 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms