RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 BIN1O00499 593 aa8.42□□□□□ -1.06
SFXN1-202ENST00000421887 PLCL1Q15111 1095 aa8.42□□□□□ -1.06
SFXN1-202ENST00000421887 PKN1Q16512 942 aa8.42□□□□□ -1.06
SFXN1-202ENST00000421887 EXOSC6Q5RKV6 272 aaKnown RBP8.42□□□□□ -1.06
SFXN1-202ENST00000421887 ACIN1Q9UKV3 1341 aaKnown RBP8.42□□□□□ -1.06
SFXN1-202ENST00000421887 FER1L4A9Z1Z3 1794 aa8.41□□□□□ -1.06
SFXN1-202ENST00000421887 FANCAO15360 1455 aa8.41□□□□□ -1.06
SFXN1-202ENST00000421887 SPOCD1Q6ZMY3 1216 aa8.41□□□□□ -1.06
SFXN1-202ENST00000421887 C2CD4AQ8NCU7 369 aaPredicted RBP8.41□□□□□ -1.06
SFXN1-202ENST00000421887 PREX1Q8TCU6 1659 aa8.4□□□□□ -1.06
SFXN1-202ENST00000421887 GOLGA3Q08378 1498 aa8.4□□□□□ -1.06
SFXN1-202ENST00000421887 NEO1Q92859 1461 aa8.4□□□□□ -1.06
SFXN1-202ENST00000421887 FARP2O94887 1054 aaPredicted RBP8.4□□□□□ -1.06
SFXN1-202ENST00000421887 CFAP70Q5T0N1 1121 aa8.4□□□□□ -1.06
SFXN1-202ENST00000421887 ABTB2Q8N961 1025 aa8.4□□□□□ -1.06
SFXN1-202ENST00000421887 BSNDQ8WZ55 320 aa8.4□□□□□ -1.06
SFXN1-202ENST00000421887 SLC5A6Q9Y289 635 aa8.4□□□□□ -1.06
SFXN1-202ENST00000421887 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.4□□□□□ -1.06
SFXN1-202ENST00000421887 ABCA9Q8IUA7 1624 aa8.4□□□□□ -1.07
SFXN1-202ENST00000421887 YEATS2Q9ULM3 1422 aa8.39□□□□□ -1.07
SFXN1-202ENST00000421887 SOX4Q06945 474 aaPredicted RBP8.39□□□□□ -1.07
SFXN1-202ENST00000421887 ZNF792Q3KQV3 632 aa8.39□□□□□ -1.07
SFXN1-202ENST00000421887 ZNF574Q6ZN55 896 aaPredicted RBP8.39□□□□□ -1.07
SFXN1-202ENST00000421887 ZNF765Q7L2R6 523 aa8.39□□□□□ -1.07
SFXN1-202ENST00000421887 TMEM102Q8N9M5 508 aaPredicted RBP8.39□□□□□ -1.07
SFXN1-202ENST00000421887 EZH1Q92800 747 aaPredicted RBP8.39□□□□□ -1.07
SFXN1-202ENST00000421887 GATA6Q92908 595 aa8.39□□□□□ -1.07
SFXN1-202ENST00000421887 ABCA8O94911 1581 aa8.39□□□□□ -1.07
SFXN1-202ENST00000421887 ARHGEF40Q8TER5 1519 aa8.39□□□□□ -1.07
SFXN1-202ENST00000421887 CTTNBP2Q8WZ74 1663 aa8.38□□□□□ -1.07
SFXN1-202ENST00000421887 ARID3CA6NKF2 412 aa8.38□□□□□ -1.07
SFXN1-202ENST00000421887 NFICP08651 508 aa8.38□□□□□ -1.07
SFXN1-202ENST00000421887 RAB6AP20340 208 aa8.38□□□□□ -1.07
SFXN1-202ENST00000421887 CYP27A1Q02318 531 aa8.38□□□□□ -1.07
SFXN1-202ENST00000421887 MLECQ14165 292 aa8.38□□□□□ -1.07
SFXN1-202ENST00000421887 VN1R5Q7Z5H4 357 aa8.38□□□□□ -1.07
SFXN1-202ENST00000421887 ATCAYQ86WG3 371 aa8.38□□□□□ -1.07
SFXN1-202ENST00000421887 OSMRQ99650 979 aa8.38□□□□□ -1.07
SFXN1-202ENST00000421887 KRTAP4-11Q9BYQ6 195 aa8.38□□□□□ -1.07
SFXN1-202ENST00000421887 RAPGEF2Q9Y4G8 1499 aa8.38□□□□□ -1.07
SFXN1-202ENST00000421887 FRMPD1Q5SYB0 1578 aa8.37□□□□□ -1.07
SFXN1-202ENST00000421887 GSTM4Q03013 218 aa8.37□□□□□ -1.07
SFXN1-202ENST00000421887 TMEM132AQ24JP5 1023 aa8.37□□□□□ -1.07
SFXN1-202ENST00000421887 KSR1Q8IVT5 923 aa8.37□□□□□ -1.07
SFXN1-202ENST00000421887 ASAP3Q8TDY4 903 aa8.37□□□□□ -1.07
SFXN1-202ENST00000421887 BCL7CQ8WUZ0 217 aaPredicted RBP8.37□□□□□ -1.07
SFXN1-202ENST00000421887 NXPE3Q969Y0 559 aa8.37□□□□□ -1.07
SFXN1-202ENST00000421887 CXXC1Q9P0U4 656 aaPredicted RBP8.37□□□□□ -1.07
SFXN1-202ENST00000421887 STRCQ7RTU9 1775 aa8.37□□□□□ -1.07
SFXN1-202ENST00000421887 AKNAQ7Z591 1439 aa8.37□□□□□ -1.07
SFXN1-202ENST00000421887 MAP7Q14244 749 aa8.36□□□□□ -1.07
SFXN1-202ENST00000421887 C8orf34Q49A92 452 aa8.36□□□□□ -1.07
SFXN1-202ENST00000421887 TTC16Q8NEE8 873 aa8.36□□□□□ -1.07
SFXN1-202ENST00000421887 TTC37Q6PGP7 1564 aa8.35□□□□□ -1.07
SFXN1-202ENST00000421887 SETD1BQ9UPS6 1966 aaKnown RBP8.35□□□□□ -1.07
SFXN1-202ENST00000421887 DENND4BO75064 1496 aaPredicted RBP8.35□□□□□ -1.07
SFXN1-202ENST00000421887 FAM168AQ92567 244 aa8.35□□□□□ -1.07
SFXN1-202ENST00000421887 ACTL7BQ9Y614 415 aa8.35□□□□□ -1.07
SFXN1-202ENST00000421887 RICTORQ6R327 1708 aa8.34□□□□□ -1.07
SFXN1-202ENST00000421887 EFCAB5A4FU69 1503 aa8.34□□□□□ -1.07
SFXN1-202ENST00000421887 IQSEC2Q5JU85 1478 aa8.34□□□□□ -1.07
SFXN1-202ENST00000421887 A6NHS1 94 aa8.34□□□□□ -1.07
SFXN1-202ENST00000421887 RPLP1P05386 114 aaKnown RBP8.34□□□□□ -1.07
SFXN1-202ENST00000421887 ADH5P11766 374 aa8.34□□□□□ -1.07
SFXN1-202ENST00000421887 DNM1Q05193 864 aaKnown RBP8.34□□□□□ -1.07
SFXN1-202ENST00000421887 SPRED2Q7Z698 418 aa8.34□□□□□ -1.07
SFXN1-202ENST00000421887 PMEPA1Q969W9 287 aa8.34□□□□□ -1.07
SFXN1-202ENST00000421887 ZKSCAN3Q9BRR0 538 aa8.34□□□□□ -1.07
SFXN1-202ENST00000421887 SOX17Q9H6I2 414 aaPredicted RBP8.34□□□□□ -1.07
SFXN1-202ENST00000421887 ZMIZ1Q9ULJ6 1067 aa8.34□□□□□ -1.07
SFXN1-202ENST00000421887 UHRF1BP1Q6BDS2 1440 aa8.34□□□□□ -1.07
SFXN1-202ENST00000421887 ZFYVE16Q7Z3T8 1539 aa8.34□□□□□ -1.08
SFXN1-202ENST00000421887 ESRRAP11474 423 aaPredicted RBP8.33□□□□□ -1.08
SFXN1-202ENST00000421887 BNIP3Q12983 259 aa8.33□□□□□ -1.08
SFXN1-202ENST00000421887 DYMQ7RTS9 669 aa8.33□□□□□ -1.08
SFXN1-202ENST00000421887 STK32AQ8WU08 396 aa8.33□□□□□ -1.08
SFXN1-202ENST00000421887 EDEM1Q92611 657 aa8.33□□□□□ -1.08
SFXN1-202ENST00000421887 SLC38A3Q99624 504 aa8.33□□□□□ -1.08
SFXN1-202ENST00000421887 CFAP74Q9C0B2 1584 aa8.33□□□□□ -1.08
SFXN1-202ENST00000421887 SEMA6CQ9H3T2 930 aa8.33□□□□□ -1.08
SFXN1-202ENST00000421887 PCSK2P16519 638 aa8.32□□□□□ -1.08
SFXN1-202ENST00000421887 XKR5Q6UX68 686 aa8.32□□□□□ -1.08
SFXN1-202ENST00000421887 STK11IPQ8N1F8 1099 aa8.32□□□□□ -1.08
SFXN1-202ENST00000421887 GGNBP2Q9H3C7 697 aa8.32□□□□□ -1.08
SFXN1-202ENST00000421887 RC3H2Q9HBD1 1191 aaKnown RBP8.32□□□□□ -1.08
SFXN1-202ENST00000421887 LGR6Q9HBX8 967 aa8.32□□□□□ -1.08
SFXN1-202ENST00000421887 ATP10BO94823 1461 aa8.32□□□□□ -1.08
SFXN1-202ENST00000421887 PTPRTO14522 1441 aa8.31□□□□□ -1.08
SFXN1-202ENST00000421887 AKAP4Q5JQC9 854 aa8.31□□□□□ -1.08
SFXN1-202ENST00000421887 ATG4DQ86TL0 474 aaPredicted RBP8.31□□□□□ -1.08
SFXN1-202ENST00000421887 CHRDQ9H2X0 955 aa8.31□□□□□ -1.08
SFXN1-202ENST00000421887 PRKCSHP14314 528 aaPredicted RBP8.3□□□□□ -1.08
SFXN1-202ENST00000421887 CEBPAP49715 358 aaPredicted RBP8.3□□□□□ -1.08
SFXN1-202ENST00000421887 WFDC3Q8IUB2 231 aa8.3□□□□□ -1.08
SFXN1-202ENST00000421887 RAD18Q9NS91 495 aa8.3□□□□□ -1.08
SFXN1-202ENST00000421887 MAGI2Q86UL8 1455 aa8.3□□□□□ -1.08
SFXN1-202ENST00000421887 FHOD3Q2V2M9 1422 aa8.29□□□□□ -1.08
SFXN1-202ENST00000421887 ZMYM4Q5VZL5 1548 aa8.29□□□□□ -1.08
SFXN1-202ENST00000421887 SIGLEC1Q9BZZ2 1709 aa8.29□□□□□ -1.08
SFXN1-202ENST00000421887 EREGO14944 169 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms