RNA–Protein interactions for RNA: ENST00000421816.6

GCDH-202, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,109 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-202ENST00000421816 TNFAIP1Q13829 316 aa23.52■■□□□ 1.36
GCDH-202ENST00000421816 TSHZ3Q63HK5 1081 aa23.52■■□□□ 1.36
GCDH-202ENST00000421816 NAA16Q6N069 864 aaPredicted RBP23.52■■□□□ 1.36
GCDH-202ENST00000421816 TMED8Q6PL24 325 aaPredicted RBP23.52■■□□□ 1.36
GCDH-202ENST00000421816 PI4K2BQ8TCG2 481 aa23.52■■□□□ 1.36
GCDH-202ENST00000421816 EDC3Q96F86 508 aaKnown RBP23.52■■□□□ 1.36
GCDH-202ENST00000421816 LNPKQ9C0E8 428 aa23.52■■□□□ 1.36
GCDH-202ENST00000421816 BTDP43251 543 aa23.51■■□□□ 1.35
GCDH-202ENST00000421816 MAP3K12Q12852 859 aa23.51■■□□□ 1.35
GCDH-202ENST00000421816 USP40Q9NVE5 1235 aa23.51■■□□□ 1.35
GCDH-202ENST00000421816 TMOD2Q9NZR1 351 aa23.51■■□□□ 1.35
GCDH-202ENST00000421816 STAP2Q9UGK3 403 aa23.51■■□□□ 1.35
GCDH-202ENST00000421816 CNTNAP1P78357 1384 aa23.51■■□□□ 1.35
GCDH-202ENST00000421816 TCP10L2B9ZVM9 353 aa23.5■■□□□ 1.35
GCDH-202ENST00000421816 ERC2O15083 957 aa23.5■■□□□ 1.35
GCDH-202ENST00000421816 CACNB3P54284 484 aa23.5■■□□□ 1.35
GCDH-202ENST00000421816 RASA3Q14644 834 aa23.5■■□□□ 1.35
GCDH-202ENST00000421816 PRAMEF18Q5VWM3 479 aa23.5■■□□□ 1.35
GCDH-202ENST00000421816 MYH7P12883 1935 aa23.5■■□□□ 1.35
GCDH-202ENST00000421816 GLRX3O76003 335 aaKnown RBP23.49■■□□□ 1.35
GCDH-202ENST00000421816 TNNI2P48788 182 aa23.49■■□□□ 1.35
GCDH-202ENST00000421816 RHBDL3P58872 404 aa23.49■■□□□ 1.35
GCDH-202ENST00000421816 HTRA3P83110 453 aa23.49■■□□□ 1.35
GCDH-202ENST00000421816 ADGRA1Q86SQ6 560 aa23.49■■□□□ 1.35
GCDH-202ENST00000421816 FAM83AQ86UY5 434 aa23.49■■□□□ 1.35
GCDH-202ENST00000421816 ZNF408Q9H9D4 720 aa23.49■■□□□ 1.35
GCDH-202ENST00000421816 RFX7Q2KHR2 1363 aa23.49■■□□□ 1.35
GCDH-202ENST00000421816 MAP4K4O95819 1239 aaPredicted RBP23.48■■□□□ 1.35
GCDH-202ENST00000421816 NEFLP07196 543 aa23.48■■□□□ 1.35
GCDH-202ENST00000421816 PDE1AP54750 535 aa23.48■■□□□ 1.35
GCDH-202ENST00000421816 MAGEB6Q8N7X4 407 aa23.48■■□□□ 1.35
GCDH-202ENST00000421816 IDI2Q9BXS1 227 aa23.48■■□□□ 1.35
GCDH-202ENST00000421816 CYP7A1P22680 504 aa23.47■■□□□ 1.35
GCDH-202ENST00000421816 PPP4CP60510 307 aa23.47■■□□□ 1.35
GCDH-202ENST00000421816 TEPSINQ96N21 525 aa23.47■■□□□ 1.35
GCDH-202ENST00000421816 SSC5DA1L4H1 1573 aa23.47■■□□□ 1.35
GCDH-202ENST00000421816 PAPPA2Q9BXP8 1791 aa23.47■■□□□ 1.35
GCDH-202ENST00000421816 PDE6AP16499 860 aa23.46■■□□□ 1.35
GCDH-202ENST00000421816 NFIAQ12857 509 aa23.46■■□□□ 1.35
GCDH-202ENST00000421816 SLC9C2Q5TAH2 1124 aa23.46■■□□□ 1.35
GCDH-202ENST00000421816 CDK5RAP2Q96SN8 1893 aa23.46■■□□□ 1.35
GCDH-202ENST00000421816 GBA2Q9HCG7 927 aaPredicted RBP23.46■■□□□ 1.35
GCDH-202ENST00000421816 FAM198AQ9UFP1 575 aa23.46■■□□□ 1.35
GCDH-202ENST00000421816 TLL2Q9Y6L7 1015 aa23.46■■□□□ 1.35
GCDH-202ENST00000421816 FOCADQ5VW36 1801 aa23.45■■□□□ 1.34
GCDH-202ENST00000421816 RPAP1Q9BWH6 1393 aaPredicted RBP23.45■■□□□ 1.34
GCDH-202ENST00000421816 TCRBV5S4A2TA0A5A2 114 aa23.45■■□□□ 1.34
GCDH-202ENST00000421816 WDHD1O75717 1129 aaPredicted RBP23.45■■□□□ 1.34
GCDH-202ENST00000421816 BAG3O95817 575 aa23.45■■□□□ 1.34
GCDH-202ENST00000421816 FAM151AQ8WW52 585 aa23.45■■□□□ 1.34
GCDH-202ENST00000421816 NOL10Q9BSC4 688 aaKnown RBP23.45■■□□□ 1.34
GCDH-202ENST00000421816 TMEM39BQ9GZU3 492 aa23.45■■□□□ 1.34
GCDH-202ENST00000421816 NF2P35240 595 aa23.44■■□□□ 1.34
GCDH-202ENST00000421816 FKBP1BP68106 108 aa23.44■■□□□ 1.34
GCDH-202ENST00000421816 SUPT20HL1Q3ZLR7 823 aa23.44■■□□□ 1.34
GCDH-202ENST00000421816 NBPF12Q5TAG4 269 aaPredicted RBP23.44■■□□□ 1.34
GCDH-202ENST00000421816 SAPCD2Q86UD0 394 aa23.44■■□□□ 1.34
GCDH-202ENST00000421816 PLEKHM2Q8IWE5 1019 aa23.44■■□□□ 1.34
GCDH-202ENST00000421816 C2orf69Q8N8R5 385 aa23.44■■□□□ 1.34
GCDH-202ENST00000421816 KBTBD3Q8NAB2 608 aa23.44■■□□□ 1.34
GCDH-202ENST00000421816 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.44■■□□□ 1.34
GCDH-202ENST00000421816 OSBPL3Q9H4L5 887 aa23.44■■□□□ 1.34
GCDH-202ENST00000421816 AATFQ9NY61 560 aaKnown RBP eCLIP23.44■■□□□ 1.34
GCDH-202ENST00000421816 ZNF532Q9HCE3 1301 aa23.43■■□□□ 1.34
GCDH-202ENST00000421816 ENTPD3O75355 529 aa23.43■■□□□ 1.34
GCDH-202ENST00000421816 NPM3O75607 178 aaKnown RBP23.43■■□□□ 1.34
GCDH-202ENST00000421816 PLCG2P16885 1265 aa23.43■■□□□ 1.34
GCDH-202ENST00000421816 ADD2P35612 726 aa23.43■■□□□ 1.34
GCDH-202ENST00000421816 RGS3P49796 1198 aa23.43■■□□□ 1.34
GCDH-202ENST00000421816 CDAN1Q8IWY9 1227 aa23.43■■□□□ 1.34
GCDH-202ENST00000421816 SH3RF3Q8TEJ3 882 aaPredicted RBP23.43■■□□□ 1.34
GCDH-202ENST00000421816 ABT1Q9ULW3 272 aaKnown RBP23.43■■□□□ 1.34
GCDH-202ENST00000421816 RASSF10A6NK89 507 aa23.42■■□□□ 1.34
GCDH-202ENST00000421816 CERS3Q8IU89 383 aa23.42■■□□□ 1.34
GCDH-202ENST00000421816 DNAJC5GQ8N7S2 189 aa23.42■■□□□ 1.34
GCDH-202ENST00000421816 DDX4Q9NQI0 724 aaKnown RBP23.42■■□□□ 1.34
GCDH-202ENST00000421816 PDE4AP27815 886 aa23.41■■□□□ 1.34
GCDH-202ENST00000421816 DYNLL1P63167 89 aaKnown RBP23.41■■□□□ 1.34
GCDH-202ENST00000421816 TCP10Q12799 353 aa23.41■■□□□ 1.34
GCDH-202ENST00000421816 UBE3CQ15386 1083 aa23.41■■□□□ 1.34
GCDH-202ENST00000421816 ZSCAN25Q6NSZ9 544 aa23.41■■□□□ 1.34
GCDH-202ENST00000421816 ZFPM1Q8IX07 1006 aa23.41■■□□□ 1.34
GCDH-202ENST00000421816 TEX11Q8IYF3 940 aa23.41■■□□□ 1.34
GCDH-202ENST00000421816 MIGA1Q8NAN2 632 aa23.41■■□□□ 1.34
GCDH-202ENST00000421816 HHIPL1Q96JK4 782 aa23.41■■□□□ 1.34
GCDH-202ENST00000421816 RIOK1Q9BRS2 568 aaKnown RBP23.4■■□□□ 1.34
GCDH-202ENST00000421816 COL2A1P02458 1487 aaPredicted RBP23.39■■□□□ 1.34
GCDH-202ENST00000421816 CHGBP05060 677 aa23.39■■□□□ 1.33
GCDH-202ENST00000421816 HUNKP57058 714 aa23.39■■□□□ 1.33
GCDH-202ENST00000421816 PICALMQ13492 652 aa23.39■■□□□ 1.33
GCDH-202ENST00000421816 MAP3K11Q16584 847 aa23.39■■□□□ 1.33
GCDH-202ENST00000421816 DEFB115Q30KQ5 88 aa23.39■■□□□ 1.33
GCDH-202ENST00000421816 SLFNL1Q499Z3 407 aa23.39■■□□□ 1.33
GCDH-202ENST00000421816 MOB2Q70IA6 237 aa23.39■■□□□ 1.33
GCDH-202ENST00000421816 CENPQQ7L2Z9 268 aaPredicted RBP23.39■■□□□ 1.33
GCDH-202ENST00000421816 AK9Q5TCS8 1911 aa23.39■■□□□ 1.33
GCDH-202ENST00000421816 MAGEB6P1A0A0J9YX57 407 aa23.38■■□□□ 1.33
GCDH-202ENST00000421816 ERICH6BQ5W0A0 696 aa23.38■■□□□ 1.33
GCDH-202ENST00000421816 SH3BP5LQ7L8J4 393 aa23.38■■□□□ 1.33
GCDH-202ENST00000421816 MKRN1Q9UHC7 482 aaKnown RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms