RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 MRIQ9BWK5 157 aa18.93■□□□□ 0.62
DDX55-203ENST00000421670 IL25Q9H293 177 aa18.93■□□□□ 0.62
DDX55-203ENST00000421670 HACL1Q9UJ83 578 aa18.93■□□□□ 0.62
DDX55-203ENST00000421670 DDX60LQ5H9U9 1706 aaKnown RBP18.92■□□□□ 0.62
DDX55-203ENST00000421670 GPR75-ASB3A0A0A6YYF3 556 aa18.92■□□□□ 0.62
DDX55-203ENST00000421670 MAGEB6P1A0A0J9YX57 407 aa18.92■□□□□ 0.62
DDX55-203ENST00000421670 MBD4O95243 580 aa18.92■□□□□ 0.62
DDX55-203ENST00000421670 NBPF9Q3BBW0 867 aa18.92■□□□□ 0.62
DDX55-203ENST00000421670 TMED8Q6PL24 325 aaPredicted RBP18.92■□□□□ 0.62
DDX55-203ENST00000421670 CCDC129Q6ZRS4 1044 aa18.92■□□□□ 0.62
DDX55-203ENST00000421670 TICAM2Q86XR7 235 aa18.92■□□□□ 0.62
DDX55-203ENST00000421670 LCORLQ8N3X6 602 aa18.92■□□□□ 0.62
DDX55-203ENST00000421670 MYH1P12882 1939 aa18.92■□□□□ 0.62
DDX55-203ENST00000421670 WNT10BO00744 389 aa18.91■□□□□ 0.62
DDX55-203ENST00000421670 MMP14P50281 582 aa18.91■□□□□ 0.62
DDX55-203ENST00000421670 ZNF589Q86UQ0 364 aaPredicted RBP18.91■□□□□ 0.62
DDX55-203ENST00000421670 MTMR14Q8NCE2 650 aa18.91■□□□□ 0.62
DDX55-203ENST00000421670 AIDAQ96BJ3 306 aa18.91■□□□□ 0.62
DDX55-203ENST00000421670 RIOK1Q9BRS2 568 aaKnown RBP18.91■□□□□ 0.62
DDX55-203ENST00000421670 NOL10Q9BSC4 688 aaKnown RBP18.91■□□□□ 0.62
DDX55-203ENST00000421670 ARMT1Q9H993 441 aa18.91■□□□□ 0.62
DDX55-203ENST00000421670 ADARB2Q9NS39 739 aaKnown RBP18.91■□□□□ 0.62
DDX55-203ENST00000421670 IQCA1LA6NCM1 817 aa18.9■□□□□ 0.62
DDX55-203ENST00000421670 GPAA1O43292 621 aa18.9■□□□□ 0.62
DDX55-203ENST00000421670 EPHX2P34913 555 aa18.9■□□□□ 0.62
DDX55-203ENST00000421670 SH3RF3Q8TEJ3 882 aaPredicted RBP18.9■□□□□ 0.62
DDX55-203ENST00000421670 ZBED3Q96IU2 234 aaPredicted RBP18.9■□□□□ 0.62
DDX55-203ENST00000421670 TDRD3Q9H7E2 651 aaKnown RBP18.9■□□□□ 0.62
DDX55-203ENST00000421670 HELLSQ9NRZ9 838 aa18.9■□□□□ 0.62
DDX55-203ENST00000421670 ASTN2O75129 1339 aaPredicted RBP18.9■□□□□ 0.62
DDX55-203ENST00000421670 CLRN2A0PK11 232 aa18.89■□□□□ 0.62
DDX55-203ENST00000421670 BAG3O95817 575 aa18.89■□□□□ 0.62
DDX55-203ENST00000421670 MCMDC2Q4G0Z9 681 aa18.89■□□□□ 0.62
DDX55-203ENST00000421670 CDC42EP5Q6NZY7 148 aa18.89■□□□□ 0.62
DDX55-203ENST00000421670 RRAGCQ9HB90 399 aa18.89■□□□□ 0.62
DDX55-203ENST00000421670 NMRK2Q9NPI5 230 aa18.89■□□□□ 0.62
DDX55-203ENST00000421670 LAMB1P07942 1786 aa18.89■□□□□ 0.61
DDX55-203ENST00000421670 HIRAP54198 1017 aaPredicted RBP18.89■□□□□ 0.61
DDX55-203ENST00000421670 CACNB3P54284 484 aa18.89■□□□□ 0.61
DDX55-203ENST00000421670 RHBDL3P58872 404 aa18.89■□□□□ 0.61
DDX55-203ENST00000421670 PPP4CP60510 307 aa18.89■□□□□ 0.61
DDX55-203ENST00000421670 CASC1Q6TDU7 716 aa18.89■□□□□ 0.61
DDX55-203ENST00000421670 TAF1DQ9H5J8 278 aaPredicted RBP18.89■□□□□ 0.61
DDX55-203ENST00000421670 ESYT1Q9BSJ8 1104 aa18.88■□□□□ 0.61
DDX55-203ENST00000421670 USP40Q9NVE5 1235 aa18.88■□□□□ 0.61
DDX55-203ENST00000421670 CCDC171Q6TFL3 1326 aa18.87■□□□□ 0.61
DDX55-203ENST00000421670 RAD50Q92878 1312 aa18.87■□□□□ 0.61
DDX55-203ENST00000421670 EAPPQ56P03 285 aaPredicted RBP18.87■□□□□ 0.61
DDX55-203ENST00000421670 TEX11Q8IYF3 940 aa18.87■□□□□ 0.61
DDX55-203ENST00000421670 RUFY2Q8WXA3 655 aa18.87■□□□□ 0.61
DDX55-203ENST00000421670 STRBPQ96SI9 672 aaKnown RBP18.87■□□□□ 0.61
DDX55-203ENST00000421670 LAMA4Q16363 1823 aa18.87■□□□□ 0.61
DDX55-203ENST00000421670 SGSM2O43147 1006 aa18.86■□□□□ 0.61
DDX55-203ENST00000421670 PRKAB2O43741 272 aa18.86■□□□□ 0.61
DDX55-203ENST00000421670 MYO1BO43795 1136 aa18.86■□□□□ 0.61
DDX55-203ENST00000421670 VEGFAP15692 232 aaPredicted RBP18.86■□□□□ 0.61
DDX55-203ENST00000421670 PLCG2P16885 1265 aa18.86■□□□□ 0.61
DDX55-203ENST00000421670 SPDYE2Q495Y8 402 aa18.86■□□□□ 0.61
DDX55-203ENST00000421670 SDR42E1Q8WUS8 393 aa18.86■□□□□ 0.61
DDX55-203ENST00000421670 VEZTQ9HBM0 779 aa18.86■□□□□ 0.61
DDX55-203ENST00000421670 ZNF70Q9UC06 446 aaPredicted RBP18.86■□□□□ 0.61
DDX55-203ENST00000421670 SCAF8Q9UPN6 1271 aaKnown RBP18.86■□□□□ 0.61
DDX55-203ENST00000421670 WDHD1O75717 1129 aaPredicted RBP18.85■□□□□ 0.61
DDX55-203ENST00000421670 NFIAQ12857 509 aa18.85■□□□□ 0.61
DDX55-203ENST00000421670 C8orf34Q49A92 452 aa18.85■□□□□ 0.61
DDX55-203ENST00000421670 VPS53Q5VIR6 699 aa18.85■□□□□ 0.61
DDX55-203ENST00000421670 USP50Q70EL3 339 aaPredicted RBP18.85■□□□□ 0.61
DDX55-203ENST00000421670 CRNKL1Q9BZJ0 848 aaKnown RBP18.85■□□□□ 0.61
DDX55-203ENST00000421670 GGA3Q9NZ52 723 aa18.85■□□□□ 0.61
DDX55-203ENST00000421670 SLC4A4Q9Y6R1 1079 aa18.85■□□□□ 0.61
DDX55-203ENST00000421670 POTEIP0CG38 1075 aa18.85■□□□□ 0.61
DDX55-203ENST00000421670 POTEJP0CG39 1038 aa18.85■□□□□ 0.61
DDX55-203ENST00000421670 PICALMQ13492 652 aa18.85■□□□□ 0.61
DDX55-203ENST00000421670 ANGEL2Q5VTE6 544 aaKnown RBP18.85■□□□□ 0.61
DDX55-203ENST00000421670 CERS3Q8IU89 383 aa18.85■□□□□ 0.61
DDX55-203ENST00000421670 TGFBRAP1Q8WUH2 860 aa18.85■□□□□ 0.61
DDX55-203ENST00000421670 SIPA1L1O43166 1804 aa18.84■□□□□ 0.61
DDX55-203ENST00000421670 FOXP2O15409 715 aa18.84■□□□□ 0.61
DDX55-203ENST00000421670 YY1P25490 414 aa18.84■□□□□ 0.61
DDX55-203ENST00000421670 MAPKAPK5Q8IW41 473 aa18.84■□□□□ 0.61
DDX55-203ENST00000421670 DDX4Q9NQI0 724 aaKnown RBP18.84■□□□□ 0.61
DDX55-203ENST00000421670 TMOD2Q9NZR1 351 aa18.84■□□□□ 0.61
DDX55-203ENST00000421670 FLT1P17948 1338 aa18.84■□□□□ 0.61
DDX55-203ENST00000421670 TCP10L2B9ZVM9 353 aa18.83■□□□□ 0.6
DDX55-203ENST00000421670 USP5P45974 858 aa18.83■□□□□ 0.6
DDX55-203ENST00000421670 MFAP1P55081 439 aaKnown RBP18.83■□□□□ 0.6
DDX55-203ENST00000421670 PNMA8AQ86V59 439 aaPredicted RBP18.83■□□□□ 0.6
DDX55-203ENST00000421670 GPBP1L1Q9HC44 474 aaPredicted RBP18.83■□□□□ 0.6
DDX55-203ENST00000421670 EPB41L4AQ9HCS5 686 aaPredicted RBP18.83■□□□□ 0.6
DDX55-203ENST00000421670 FAM198AQ9UFP1 575 aa18.83■□□□□ 0.6
DDX55-203ENST00000421670 MYH8P13535 1937 aa18.83■□□□□ 0.6
DDX55-203ENST00000421670 HSPD1P10809 573 aaKnown RBP18.82■□□□□ 0.6
DDX55-203ENST00000421670 CNTNAP1P78357 1384 aa18.82■□□□□ 0.6
DDX55-203ENST00000421670 GSG1L2A8MUP6 293 aa18.81■□□□□ 0.6
DDX55-203ENST00000421670 APPP05067 770 aa18.81■□□□□ 0.6
DDX55-203ENST00000421670 GNAT2P19087 354 aa18.81■□□□□ 0.6
DDX55-203ENST00000421670 TCP10Q12799 353 aa18.81■□□□□ 0.6
DDX55-203ENST00000421670 IDI2Q9BXS1 227 aa18.81■□□□□ 0.6
DDX55-203ENST00000421670 ANO2Q9NQ90 1003 aa18.81■□□□□ 0.6
DDX55-203ENST00000421670 PTH1RQ03431 593 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms