RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 TMC4Q7Z404 712 aa10.65□□□□□ -0.7
LINCMD1-201ENST00000418518 ADGRA1Q86SQ6 560 aa10.65□□□□□ -0.7
LINCMD1-201ENST00000418518 VPS37DQ86XT2 251 aa10.65□□□□□ -0.7
LINCMD1-201ENST00000418518 NSUN4Q96CB9 384 aaKnown RBP10.65□□□□□ -0.7
LINCMD1-201ENST00000418518 CRAMP1Q96RY5 1269 aa10.65□□□□□ -0.7
LINCMD1-201ENST00000418518 BRIP1Q9BX63 1249 aa10.65□□□□□ -0.7
LINCMD1-201ENST00000418518 ZSCAN16Q9H4T2 348 aaPredicted RBP10.65□□□□□ -0.7
LINCMD1-201ENST00000418518 GRPEL1Q9HAV7 217 aa10.65□□□□□ -0.7
LINCMD1-201ENST00000418518 BRPF3Q9ULD4 1205 aa10.65□□□□□ -0.7
LINCMD1-201ENST00000418518 NSFL1CQ9UNZ2 370 aaKnown RBP10.65□□□□□ -0.7
LINCMD1-201ENST00000418518 MAGEB6P1A0A0J9YX57 407 aa10.64□□□□□ -0.71
LINCMD1-201ENST00000418518 KLF18A0A0U1RQI7 1052 aa10.64□□□□□ -0.71
LINCMD1-201ENST00000418518 DHX16O60231 1041 aaKnown RBP10.64□□□□□ -0.71
LINCMD1-201ENST00000418518 GADD45BO75293 160 aaPredicted RBP10.64□□□□□ -0.71
LINCMD1-201ENST00000418518 APPP05067 770 aa10.64□□□□□ -0.71
LINCMD1-201ENST00000418518 FGRP09769 529 aa10.64□□□□□ -0.71
LINCMD1-201ENST00000418518 PCP11498 1178 aaKnown RBP10.64□□□□□ -0.71
LINCMD1-201ENST00000418518 KRT85P78386 507 aa10.64□□□□□ -0.71
LINCMD1-201ENST00000418518 DNM1Q05193 864 aaKnown RBP10.64□□□□□ -0.71
LINCMD1-201ENST00000418518 CCDC24Q8N4L8 307 aa10.64□□□□□ -0.71
LINCMD1-201ENST00000418518 TDRD7Q8NHU6 1098 aaKnown RBP10.64□□□□□ -0.71
LINCMD1-201ENST00000418518 IGDCC4Q8TDY8 1250 aa10.64□□□□□ -0.71
LINCMD1-201ENST00000418518 SYAP1Q96A49 352 aaPredicted RBP10.64□□□□□ -0.71
LINCMD1-201ENST00000418518 KRT23Q9C075 422 aa10.64□□□□□ -0.71
LINCMD1-201ENST00000418518 RNF41Q9H4P4 317 aaPredicted RBP10.64□□□□□ -0.71
LINCMD1-201ENST00000418518 GPHNQ9NQX3 736 aaPredicted RBP10.64□□□□□ -0.71
LINCMD1-201ENST00000418518 PODXL2Q9NZ53 605 aa10.64□□□□□ -0.71
LINCMD1-201ENST00000418518 RAI14Q9P0K7 980 aa10.64□□□□□ -0.71
LINCMD1-201ENST00000418518 IQSEC3Q9UPP2 1182 aaPredicted RBP10.64□□□□□ -0.71
LINCMD1-201ENST00000418518 TACC3Q9Y6A5 838 aa10.64□□□□□ -0.71
LINCMD1-201ENST00000418518 SLC4A4Q9Y6R1 1079 aa10.64□□□□□ -0.71
LINCMD1-201ENST00000418518 MYH1P12882 1939 aa10.64□□□□□ -0.71
LINCMD1-201ENST00000418518 GOLGA8BA8MQT2 603 aa10.63□□□□□ -0.71
LINCMD1-201ENST00000418518 B4E1Z4 1266 aa10.63□□□□□ -0.71
LINCMD1-201ENST00000418518 PRKAB2O43741 272 aa10.63□□□□□ -0.71
LINCMD1-201ENST00000418518 FDPSP14324 419 aaKnown RBP10.63□□□□□ -0.71
LINCMD1-201ENST00000418518 NCLP19338 710 aaKnown RBP10.63□□□□□ -0.71
LINCMD1-201ENST00000418518 SPTY2D1Q68D10 685 aaPredicted RBP10.63□□□□□ -0.71
LINCMD1-201ENST00000418518 ATL3Q6DD88 541 aa10.63□□□□□ -0.71
LINCMD1-201ENST00000418518 APOA5Q6Q788 366 aa10.63□□□□□ -0.71
LINCMD1-201ENST00000418518 CHST3Q7LGC8 479 aa10.63□□□□□ -0.71
LINCMD1-201ENST00000418518 FLAD1Q8NFF5 587 aa10.63□□□□□ -0.71
LINCMD1-201ENST00000418518 NKX2-3Q8TAU0 364 aa10.63□□□□□ -0.71
LINCMD1-201ENST00000418518 RPGRQ92834 1020 aaKnown RBP10.63□□□□□ -0.71
LINCMD1-201ENST00000418518 RBM17Q96I25 401 aaKnown RBP10.63□□□□□ -0.71
LINCMD1-201ENST00000418518 SCAND2PQ9GZW5 306 aaPredicted RBP10.63□□□□□ -0.71
LINCMD1-201ENST00000418518 LY9Q9HBG7 655 aa10.63□□□□□ -0.71
LINCMD1-201ENST00000418518 GDPD2Q9HCC8 539 aa10.63□□□□□ -0.71
LINCMD1-201ENST00000418518 NCOA5Q9HCD5 579 aaKnown RBP10.63□□□□□ -0.71
LINCMD1-201ENST00000418518 RBM27Q9P2N5 1060 aaKnown RBP10.63□□□□□ -0.71
LINCMD1-201ENST00000418518 STK36Q9NRP7 1315 aa10.62□□□□□ -0.71
LINCMD1-201ENST00000418518 NPHP1O15259 732 aa10.62□□□□□ -0.71
LINCMD1-201ENST00000418518 BBOX1O75936 387 aa10.62□□□□□ -0.71
LINCMD1-201ENST00000418518 ATP2B4P23634 1241 aa10.62□□□□□ -0.71
LINCMD1-201ENST00000418518 TDO2P48775 406 aa10.62□□□□□ -0.71
LINCMD1-201ENST00000418518 NT5C2P49902 561 aa10.62□□□□□ -0.71
LINCMD1-201ENST00000418518 CCT2P78371 535 aaKnown RBP10.62□□□□□ -0.71
LINCMD1-201ENST00000418518 MECOMQ03112 1051 aa10.62□□□□□ -0.71
LINCMD1-201ENST00000418518 PPARAQ07869 468 aa10.62□□□□□ -0.71
LINCMD1-201ENST00000418518 ZNF827Q17R98 1081 aa10.62□□□□□ -0.71
LINCMD1-201ENST00000418518 LRSAM1Q6UWE0 723 aa10.62□□□□□ -0.71
LINCMD1-201ENST00000418518 ZNF804AQ7Z570 1209 aa10.62□□□□□ -0.71
LINCMD1-201ENST00000418518 TTC6Q86TZ1 520 aa10.62□□□□□ -0.71
LINCMD1-201ENST00000418518 TXNRD3Q86VQ6 643 aa10.62□□□□□ -0.71
LINCMD1-201ENST00000418518 MIGA1Q8NAN2 632 aa10.62□□□□□ -0.71
LINCMD1-201ENST00000418518 FAM184AQ8NB25 1140 aa10.62□□□□□ -0.71
LINCMD1-201ENST00000418518 WDR66Q8TBY9 1149 aa10.62□□□□□ -0.71
LINCMD1-201ENST00000418518 ABCF2Q9UG63 623 aa10.62□□□□□ -0.71
LINCMD1-201ENST00000418518 EP400Q96L91 3159 aa10.62□□□□□ -0.71
LINCMD1-201ENST00000418518 PSME4Q14997 1843 aa10.61□□□□□ -0.71
LINCMD1-201ENST00000418518 MYH8P13535 1937 aa10.61□□□□□ -0.71
LINCMD1-201ENST00000418518 H3BQV1 296 aa10.61□□□□□ -0.71
LINCMD1-201ENST00000418518 FIBPO43427 364 aa10.61□□□□□ -0.71
LINCMD1-201ENST00000418518 DTNBO60941 627 aa10.61□□□□□ -0.71
LINCMD1-201ENST00000418518 CTDSPL2Q05D32 466 aa10.61□□□□□ -0.71
LINCMD1-201ENST00000418518 SBK1Q52WX2 424 aa10.61□□□□□ -0.71
LINCMD1-201ENST00000418518 CCDC183Q5T5S1 534 aa10.61□□□□□ -0.71
LINCMD1-201ENST00000418518 IFFO2Q5TF58 517 aa10.61□□□□□ -0.71
LINCMD1-201ENST00000418518 MFSD6Q6ZSS7 791 aa10.61□□□□□ -0.71
LINCMD1-201ENST00000418518 FERMT3Q86UX7 667 aa10.61□□□□□ -0.71
LINCMD1-201ENST00000418518 NLGN1Q8N2Q7 840 aa10.61□□□□□ -0.71
LINCMD1-201ENST00000418518 DDX11Q96FC9 970 aa10.61□□□□□ -0.71
LINCMD1-201ENST00000418518 TFCP2L1Q9NZI6 479 aa10.61□□□□□ -0.71
LINCMD1-201ENST00000418518 ROBO3Q96MS0 1386 aa10.61□□□□□ -0.71
LINCMD1-201ENST00000418518 ORC4O43929 436 aa10.6□□□□□ -0.71
LINCMD1-201ENST00000418518 KDM4AO75164 1064 aa10.6□□□□□ -0.71
LINCMD1-201ENST00000418518 CDKL5O76039 1030 aa10.6□□□□□ -0.71
LINCMD1-201ENST00000418518 LETM1O95202 739 aaPredicted RBP10.6□□□□□ -0.71
LINCMD1-201ENST00000418518 IL1R1P14778 569 aa10.6□□□□□ -0.71
LINCMD1-201ENST00000418518 PRDX5P30044 214 aa10.6□□□□□ -0.71
LINCMD1-201ENST00000418518 ADD1P35611 737 aaKnown RBP10.6□□□□□ -0.71
LINCMD1-201ENST00000418518 METAP2P50579 478 aaKnown RBP eCLIP10.6□□□□□ -0.71
LINCMD1-201ENST00000418518 DYNLL1P63167 89 aaKnown RBP10.6□□□□□ -0.71
LINCMD1-201ENST00000418518 GPSM2P81274 684 aa10.6□□□□□ -0.71
LINCMD1-201ENST00000418518 NTRK3Q16288 839 aa10.6□□□□□ -0.71
LINCMD1-201ENST00000418518 TMEM67Q5HYA8 995 aa10.6□□□□□ -0.71
LINCMD1-201ENST00000418518 CERS3Q8IU89 383 aa10.6□□□□□ -0.71
LINCMD1-201ENST00000418518 LEO1Q8WVC0 666 aaPredicted RBP10.6□□□□□ -0.71
LINCMD1-201ENST00000418518 CRNKL1Q9BZJ0 848 aaKnown RBP10.6□□□□□ -0.71
LINCMD1-201ENST00000418518 ATP8A2Q9NTI2 1148 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms