RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 EVCP57679 992 aa16.01■□□□□ 0.15
NUB1-201ENST00000413040 PTPN14Q15678 1187 aa16.01■□□□□ 0.15
NUB1-201ENST00000413040 XPO4Q9C0E2 1151 aaKnown RBP16.01■□□□□ 0.15
NUB1-201ENST00000413040 SLC12A7Q9Y666 1083 aa16.01■□□□□ 0.15
NUB1-201ENST00000413040 A0A1W2PQ27 194 aa16.01■□□□□ 0.15
NUB1-201ENST00000413040 A0A1W2PQ64 194 aa16.01■□□□□ 0.15
NUB1-201ENST00000413040 A0A1W2PQD8 194 aa16.01■□□□□ 0.15
NUB1-201ENST00000413040 PRKAB2O43741 272 aa16.01■□□□□ 0.15
NUB1-201ENST00000413040 PTPN21Q16825 1174 aa16.01■□□□□ 0.15
NUB1-201ENST00000413040 CEP135Q66GS9 1140 aa16.01■□□□□ 0.15
NUB1-201ENST00000413040 PLA2G12BQ9BX93 195 aa16.01■□□□□ 0.15
NUB1-201ENST00000413040 NEDD4P46934 1319 aa16.01■□□□□ 0.15
NUB1-201ENST00000413040 SOS2Q07890 1332 aaPredicted RBP16.01■□□□□ 0.15
NUB1-201ENST00000413040 CDKL5O76039 1030 aa16■□□□□ 0.15
NUB1-201ENST00000413040 CYP19A1P11511 503 aaPredicted RBP16■□□□□ 0.15
NUB1-201ENST00000413040 GTF2F1P35269 517 aaKnown RBP eCLIP16■□□□□ 0.15
NUB1-201ENST00000413040 TPM4P67936 248 aa16■□□□□ 0.15
NUB1-201ENST00000413040 MAP3K12Q12852 859 aa16■□□□□ 0.15
NUB1-201ENST00000413040 SARM1Q6SZW1 724 aa16■□□□□ 0.15
NUB1-201ENST00000413040 ACSBG1Q96GR2 724 aa16■□□□□ 0.15
NUB1-201ENST00000413040 ABCF2Q9UG63 623 aa16■□□□□ 0.15
NUB1-201ENST00000413040 EXOC5O00471 708 aa16■□□□□ 0.15
NUB1-201ENST00000413040 SH2B2O14492 632 aaPredicted RBP15.99■□□□□ 0.15
NUB1-201ENST00000413040 ZSWIM5Q9P217 1185 aa15.99■□□□□ 0.15
NUB1-201ENST00000413040 LRP2BPQ9P2M1 347 aa15.99■□□□□ 0.15
NUB1-201ENST00000413040 ZMYM6O95789 1325 aa15.99■□□□□ 0.15
NUB1-201ENST00000413040 PKD1L3Q7Z443 1732 aa15.99■□□□□ 0.15
NUB1-201ENST00000413040 MINDY4BA8MYZ0 360 aa15.99■□□□□ 0.15
NUB1-201ENST00000413040 UBE3CQ15386 1083 aa15.99■□□□□ 0.15
NUB1-201ENST00000413040 PUM3Q15397 648 aaKnown RBP15.99■□□□□ 0.15
NUB1-201ENST00000413040 SPATA5Q8NB90 893 aa15.99■□□□□ 0.15
NUB1-201ENST00000413040 STRBPQ96SI9 672 aaKnown RBP15.99■□□□□ 0.15
NUB1-201ENST00000413040 CCDC94Q9BW85 323 aaPredicted RBP15.99■□□□□ 0.15
NUB1-201ENST00000413040 UQCRFS1P1P0C7P4 283 aa15.99■□□□□ 0.15
NUB1-201ENST00000413040 SLC5A1P13866 664 aa15.99■□□□□ 0.15
NUB1-201ENST00000413040 TICAM2Q86XR7 235 aa15.99■□□□□ 0.15
NUB1-201ENST00000413040 IFNL3Q8IZI9 196 aa15.99■□□□□ 0.15
NUB1-201ENST00000413040 LPIN2Q92539 896 aa15.99■□□□□ 0.15
NUB1-201ENST00000413040 KCNJ14Q9UNX9 436 aa15.99■□□□□ 0.15
NUB1-201ENST00000413040 RIC1Q4ADV7 1423 aa15.99■□□□□ 0.15
NUB1-201ENST00000413040 U2AF2P26368 475 aaKnown RBP eCLIP15.98■□□□□ 0.154e-6■□□□□ 10.9
NUB1-201ENST00000413040 BCAMP50895 628 aa15.98■□□□□ 0.15
NUB1-201ENST00000413040 PNOCQ13519 176 aa15.98■□□□□ 0.15
NUB1-201ENST00000413040 RASGRF1Q13972 1273 aa15.98■□□□□ 0.15
NUB1-201ENST00000413040 CDC25BP30305 580 aa15.98■□□□□ 0.15
NUB1-201ENST00000413040 SLC39A14Q15043 492 aa15.98■□□□□ 0.15
NUB1-201ENST00000413040 JMYQ8N9B5 988 aa15.98■□□□□ 0.15
NUB1-201ENST00000413040 SLC4A4Q9Y6R1 1079 aa15.98■□□□□ 0.15
NUB1-201ENST00000413040 MROH7-TTC4A0A0A0MT08 1334 aa15.98■□□□□ 0.15
NUB1-201ENST00000413040 STRCP1A6NGW2 1772 aa15.97■□□□□ 0.15
NUB1-201ENST00000413040 SMTNL1A8MU46 457 aa15.97■□□□□ 0.15
NUB1-201ENST00000413040 SERPINC1P01008 464 aa15.97■□□□□ 0.15
NUB1-201ENST00000413040 CMA1P23946 247 aa15.97■□□□□ 0.15
NUB1-201ENST00000413040 SSRP1Q08945 709 aaKnown RBP15.97■□□□□ 0.15
NUB1-201ENST00000413040 AXDND1Q5T1B0 1012 aaPredicted RBP15.97■□□□□ 0.15
NUB1-201ENST00000413040 MFSD6Q6ZSS7 791 aa15.97■□□□□ 0.15
NUB1-201ENST00000413040 UBN2Q6ZU65 1347 aa15.97■□□□□ 0.15
NUB1-201ENST00000413040 PDILTQ8N807 584 aa15.97■□□□□ 0.15
NUB1-201ENST00000413040 LAMB4A4D0S4 1761 aa15.97■□□□□ 0.15
NUB1-201ENST00000413040 GLI3P10071 1580 aa15.97■□□□□ 0.15
NUB1-201ENST00000413040 CDHR2Q9BYE9 1310 aa15.97■□□□□ 0.15
NUB1-201ENST00000413040 ATP1A3P13637 1013 aa15.97■□□□□ 0.15
NUB1-201ENST00000413040 FBXL16Q8N461 479 aa15.97■□□□□ 0.15
NUB1-201ENST00000413040 BTBD18B2RXH4 712 aa15.97■□□□□ 0.15
NUB1-201ENST00000413040 SFPQP23246 707 aaKnown RBP eCLIP15.97■□□□□ 0.15
NUB1-201ENST00000413040 NLRP12P59046 1061 aa15.97■□□□□ 0.15
NUB1-201ENST00000413040 SUSD4Q5VX71 490 aa15.97■□□□□ 0.15
NUB1-201ENST00000413040 VGLL2Q8N8G2 317 aa15.97■□□□□ 0.15
NUB1-201ENST00000413040 CNNM3Q8NE01 707 aa15.97■□□□□ 0.15
NUB1-201ENST00000413040 ERICH2A1L162 156 aa15.96■□□□□ 0.15
NUB1-201ENST00000413040 NEMFO60524 1076 aa15.96■□□□□ 0.15
NUB1-201ENST00000413040 SAFBQ15424 915 aaKnown RBP eCLIP15.96■□□□□ 0.15
NUB1-201ENST00000413040 CFAP100Q494V2 611 aa15.96■□□□□ 0.15
NUB1-201ENST00000413040 TMEM87BQ96K49 555 aa15.96■□□□□ 0.15
NUB1-201ENST00000413040 EPB41L4AQ9HCS5 686 aaPredicted RBP15.96■□□□□ 0.15
NUB1-201ENST00000413040 PATL2C9JE40 543 aaKnown RBP15.96■□□□□ 0.15
NUB1-201ENST00000413040 IGDCC4Q8TDY8 1250 aa15.96■□□□□ 0.15
NUB1-201ENST00000413040 TJP1Q07157 1748 aa15.96■□□□□ 0.14
NUB1-201ENST00000413040 RANBP6O60518 1105 aaKnown RBP15.95■□□□□ 0.14
NUB1-201ENST00000413040 GUCY1A2P33402 732 aa15.95■□□□□ 0.14
NUB1-201ENST00000413040 CCZ1BP86790 482 aa15.95■□□□□ 0.14
NUB1-201ENST00000413040 CCZ1P86791 482 aaPredicted RBP15.95■□□□□ 0.14
NUB1-201ENST00000413040 SHC4Q6S5L8 630 aa15.95■□□□□ 0.14
NUB1-201ENST00000413040 LY9Q9HBG7 655 aa15.95■□□□□ 0.14
NUB1-201ENST00000413040 TNS2Q63HR2 1409 aa15.95■□□□□ 0.14
NUB1-201ENST00000413040 NRDCO43847 1150 aa15.95■□□□□ 0.14
NUB1-201ENST00000413040 HOMER1Q86YM7 354 aa15.95■□□□□ 0.14
NUB1-201ENST00000413040 LCORLQ8N3X6 602 aa15.95■□□□□ 0.14
NUB1-201ENST00000413040 PAXBP1Q9Y5B6 917 aa15.95■□□□□ 0.14
NUB1-201ENST00000413040 hCG_1642624A0A1W2PR95 340 aa15.95■□□□□ 0.14
NUB1-201ENST00000413040 TRIM22Q8IYM9 498 aa15.95■□□□□ 0.14
NUB1-201ENST00000413040 NACAP1Q9BZK3 213 aa15.95■□□□□ 0.14
NUB1-201ENST00000413040 ATP6V1AP38606 617 aa15.94■□□□□ 0.14
NUB1-201ENST00000413040 IGHMBP2P38935 993 aaKnown RBP15.94■□□□□ 0.14
NUB1-201ENST00000413040 GSDMDP57764 484 aa15.94■□□□□ 0.14
NUB1-201ENST00000413040 FANCCQ00597 558 aa15.94■□□□□ 0.14
NUB1-201ENST00000413040 WTAPQ15007 396 aa15.94■□□□□ 0.14
NUB1-201ENST00000413040 SART3Q15020 963 aaKnown RBP15.94■□□□□ 0.14
NUB1-201ENST00000413040 AKNAD1Q5T1N1 836 aa15.94■□□□□ 0.14
NUB1-201ENST00000413040 NBPF11Q86T75 865 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms