RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 TM4SF1P30408 202 aa28.74■■■□□ 2.19
VRK2-202ENST00000412104 CNNM2Q9H8M5 875 aa28.74■■■□□ 2.19
VRK2-202ENST00000412104 LRRC4BQ9NT99 713 aa28.74■■■□□ 2.19
VRK2-202ENST00000412104 IGDCC4Q8TDY8 1250 aa28.73■■■□□ 2.19
VRK2-202ENST00000412104 ORC3Q9UBD5 711 aaPredicted RBP28.73■■■□□ 2.19
VRK2-202ENST00000412104 SEMA3EO15041 775 aa28.73■■■□□ 2.19
VRK2-202ENST00000412104 NPHP1O15259 732 aa28.73■■■□□ 2.19
VRK2-202ENST00000412104 GIMAP6Q6P9H5 292 aa28.73■■■□□ 2.19
VRK2-202ENST00000412104 APOA5Q6Q788 366 aa28.73■■■□□ 2.19
VRK2-202ENST00000412104 STAG1Q8WVM7 1258 aa28.73■■■□□ 2.19
VRK2-202ENST00000412104 PGBD1Q96JS3 809 aa28.73■■■□□ 2.19
VRK2-202ENST00000412104 LY9Q9HBG7 655 aa28.73■■■□□ 2.19
VRK2-202ENST00000412104 SENP2Q9HC62 589 aa28.73■■■□□ 2.19
VRK2-202ENST00000412104 UBR3Q6ZT12 1888 aa28.72■■■□□ 2.19
VRK2-202ENST00000412104 MAGEB6P1A0A0J9YX57 407 aa28.72■■■□□ 2.19
VRK2-202ENST00000412104 METAP2P50579 478 aaKnown RBP eCLIP28.72■■■□□ 2.19
VRK2-202ENST00000412104 NFIXQ14938 502 aa28.72■■■□□ 2.19
VRK2-202ENST00000412104 MFSD6Q6ZSS7 791 aa28.72■■■□□ 2.19
VRK2-202ENST00000412104 PDLIM2Q96JY6 352 aa28.72■■■□□ 2.19
VRK2-202ENST00000412104 KRT23Q9C075 422 aa28.72■■■□□ 2.19
VRK2-202ENST00000412104 KDM4AO75164 1064 aa28.71■■■□□ 2.19
VRK2-202ENST00000412104 FUCA2Q9BTY2 467 aa28.71■■■□□ 2.19
VRK2-202ENST00000412104 TMEM67Q5HYA8 995 aa28.71■■■□□ 2.19
VRK2-202ENST00000412104 ILDR1Q86SU0 546 aaPredicted RBP28.71■■■□□ 2.19
VRK2-202ENST00000412104 SGMS1Q86VZ5 419 aa28.71■■■□□ 2.19
VRK2-202ENST00000412104 C8orf76Q96K31 380 aa28.71■■■□□ 2.19
VRK2-202ENST00000412104 ZSWIM5Q9P217 1185 aa28.71■■■□□ 2.19
VRK2-202ENST00000412104 RIOK1Q9BRS2 568 aaKnown RBP28.7■■■□□ 2.18
VRK2-202ENST00000412104 PDS5AQ29RF7 1337 aaKnown RBP28.69■■■□□ 2.18
VRK2-202ENST00000412104 ADRA2BP18089 450 aa28.69■■■□□ 2.18
VRK2-202ENST00000412104 ATL3Q6DD88 541 aa28.69■■■□□ 2.18
VRK2-202ENST00000412104 NUP62CLQ9H1M0 184 aa28.69■■■□□ 2.18
VRK2-202ENST00000412104 LIFRP42702 1097 aa28.69■■■□□ 2.18
VRK2-202ENST00000412104 CEBPZQ03701 1054 aaKnown RBP28.69■■■□□ 2.18
VRK2-202ENST00000412104 NFXL1Q6ZNB6 911 aa28.69■■■□□ 2.18
VRK2-202ENST00000412104 SDR42E1Q8WUS8 393 aa28.69■■■□□ 2.18
VRK2-202ENST00000412104 ZNF396Q96N95 335 aaPredicted RBP28.69■■■□□ 2.18
VRK2-202ENST00000412104 FTOQ9C0B1 505 aaKnown RBP eCLIP28.69■■■□□ 2.18
VRK2-202ENST00000412104 TFCP2L1Q9NZI6 479 aa28.69■■■□□ 2.18
VRK2-202ENST00000412104 ECM29Q5VYK3 1845 aa28.68■■■□□ 2.18
VRK2-202ENST00000412104 RXRAP19793 462 aa28.68■■■□□ 2.18
VRK2-202ENST00000412104 HIBADHP31937 336 aaKnown RBP28.68■■■□□ 2.18
VRK2-202ENST00000412104 OTUD7BQ6GQQ9 843 aa28.68■■■□□ 2.18
VRK2-202ENST00000412104 MICU3Q86XE3 530 aa28.68■■■□□ 2.18
VRK2-202ENST00000412104 CNBD1Q8NA66 436 aa28.68■■■□□ 2.18
VRK2-202ENST00000412104 FBXO18Q8NFZ0 1043 aa28.68■■■□□ 2.18
VRK2-202ENST00000412104 BICD2Q8TD16 824 aa28.68■■■□□ 2.18
VRK2-202ENST00000412104 ZNF384Q8TF68 577 aa28.68■■■□□ 2.18
VRK2-202ENST00000412104 USP28Q96RU2 1077 aa28.68■■■□□ 2.18
VRK2-202ENST00000412104 DACT1Q9NYF0 836 aa28.68■■■□□ 2.18
VRK2-202ENST00000412104 IFIT3O14879 490 aaKnown RBP28.67■■■□□ 2.18
VRK2-202ENST00000412104 ZBTB43O43298 467 aa28.67■■■□□ 2.18
VRK2-202ENST00000412104 PPARAQ07869 468 aa28.67■■■□□ 2.18
VRK2-202ENST00000412104 RCOR1Q9UKL0 485 aa28.67■■■□□ 2.18
VRK2-202ENST00000412104 MAST2Q6P0Q8 1798 aa28.67■■■□□ 2.18
VRK2-202ENST00000412104 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.67■■■□□ 2.18
VRK2-202ENST00000412104 RRP12Q5JTH9 1297 aaKnown RBP28.67■■■□□ 2.18
VRK2-202ENST00000412104 CDKL5O76039 1030 aa28.66■■■□□ 2.18
VRK2-202ENST00000412104 CDC27P30260 824 aa28.66■■■□□ 2.18
VRK2-202ENST00000412104 RNF41Q9H4P4 317 aaPredicted RBP28.66■■■□□ 2.18
VRK2-202ENST00000412104 QTRT2Q9H974 415 aaKnown RBP28.66■■■□□ 2.18
VRK2-202ENST00000412104 DDX19AQ9NUU7 478 aaKnown RBP28.66■■■□□ 2.18
VRK2-202ENST00000412104 TOMM22Q9NS69 142 aa28.65■■■□□ 2.18
VRK2-202ENST00000412104 IRS2Q9Y4H2 1338 aa28.65■■■□□ 2.18
VRK2-202ENST00000412104 ESPNB1AK53 854 aa28.65■■■□□ 2.18
VRK2-202ENST00000412104 DYNLL1P63167 89 aaKnown RBP28.65■■■□□ 2.18
VRK2-202ENST00000412104 GOLGA8AA7E2F4 631 aa28.64■■■□□ 2.18
VRK2-202ENST00000412104 GRAPQ13588 217 aa28.64■■■□□ 2.18
VRK2-202ENST00000412104 MAP3K11Q16584 847 aa28.64■■■□□ 2.18
VRK2-202ENST00000412104 UVSSAQ2YD98 709 aa28.64■■■□□ 2.18
VRK2-202ENST00000412104 CPLX2Q6PUV4 134 aaKnown RBP28.64■■■□□ 2.18
VRK2-202ENST00000412104 CCDC144CPQ8IYA2 1237 aa28.64■■■□□ 2.18
VRK2-202ENST00000412104 GRAPLQ8TC17 118 aaPredicted RBP28.64■■■□□ 2.18
VRK2-202ENST00000412104 NSUN4Q96CB9 384 aaKnown RBP28.64■■■□□ 2.18
VRK2-202ENST00000412104 MYL10Q9BUA6 226 aa28.64■■■□□ 2.18
VRK2-202ENST00000412104 ANAPC4Q9UJX5 808 aa28.64■■■□□ 2.18
VRK2-202ENST00000412104 SLC12A7Q9Y666 1083 aa28.64■■■□□ 2.18
VRK2-202ENST00000412104 BRWD3Q6RI45 1802 aa28.64■■■□□ 2.18
VRK2-202ENST00000412104 BAZ2AQ9UIF9 1905 aaKnown RBP28.64■■■□□ 2.17
VRK2-202ENST00000412104 CCDC69A6NI79 296 aa28.63■■■□□ 2.17
VRK2-202ENST00000412104 CAMK4Q16566 473 aa28.63■■■□□ 2.17
VRK2-202ENST00000412104 STK11IPQ8N1F8 1099 aa28.63■■■□□ 2.17
VRK2-202ENST00000412104 RGS22Q8NE09 1264 aa28.63■■■□□ 2.17
VRK2-202ENST00000412104 GJB4Q9NTQ9 266 aa28.63■■■□□ 2.17
VRK2-202ENST00000412104 NID2Q14112 1375 aa28.63■■■□□ 2.17
VRK2-202ENST00000412104 NR1I2O75469 434 aa28.63■■■□□ 2.17
VRK2-202ENST00000412104 TXNRD3Q86VQ6 643 aa28.63■■■□□ 2.17
VRK2-202ENST00000412104 TNMDQ9H2S6 317 aa28.63■■■□□ 2.17
VRK2-202ENST00000412104 CLSTN2Q9H4D0 955 aa28.63■■■□□ 2.17
VRK2-202ENST00000412104 FAM217BQ9NTX9 383 aaPredicted RBP28.63■■■□□ 2.17
VRK2-202ENST00000412104 MINDY4BA8MYZ0 360 aa28.62■■■□□ 2.17
VRK2-202ENST00000412104 MECOMQ03112 1051 aa28.62■■■□□ 2.17
VRK2-202ENST00000412104 SART3Q15020 963 aaKnown RBP28.62■■■□□ 2.17
VRK2-202ENST00000412104 NTRK3Q16288 839 aa28.62■■■□□ 2.17
VRK2-202ENST00000412104 PRR5LQ6MZQ0 368 aa28.62■■■□□ 2.17
VRK2-202ENST00000412104 MTA3Q9BTC8 594 aa28.62■■■□□ 2.17
VRK2-202ENST00000412104 BRIP1Q9BX63 1249 aa28.62■■■□□ 2.17
VRK2-202ENST00000412104 CCDC88AQ3V6T2 1871 aa28.62■■■□□ 2.17
VRK2-202ENST00000412104 CCDC192P0DO97 292 aa28.61■■■□□ 2.17
VRK2-202ENST00000412104 CHAF1AQ13111 956 aaPredicted RBP28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms