RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 PODXL2Q9NZ53 605 aa8.39□□□□□ -1.07
LINC00396-201ENST00000411690 GGA1Q9UJY5 639 aa8.39□□□□□ -1.07
LINC00396-201ENST00000411690 BRCA2P51587 3418 aa8.39□□□□□ -1.07
LINC00396-201ENST00000411690 CENPFP49454 3210 aa8.39□□□□□ -1.07
LINC00396-201ENST00000411690 ERBB4Q15303 1308 aa8.38□□□□□ -1.07
LINC00396-201ENST00000411690 UNCXA6NJT0 531 aa8.38□□□□□ -1.07
LINC00396-201ENST00000411690 SASH1O94885 1247 aa8.38□□□□□ -1.07
LINC00396-201ENST00000411690 SLC4A3P48751 1232 aa8.38□□□□□ -1.07
LINC00396-201ENST00000411690 EIF4A1P60842 406 aaKnown RBP8.38□□□□□ -1.07
LINC00396-201ENST00000411690 SF3B3Q15393 1217 aaKnown RBP8.38□□□□□ -1.07
LINC00396-201ENST00000411690 TAF1CQ15572 869 aaPredicted RBP8.38□□□□□ -1.07
LINC00396-201ENST00000411690 PNISRQ8TF01 805 aaKnown RBP8.38□□□□□ -1.07
LINC00396-201ENST00000411690 PKD2L1Q9P0L9 805 aa8.38□□□□□ -1.07
LINC00396-201ENST00000411690 FARP2O94887 1054 aaPredicted RBP8.37□□□□□ -1.07
LINC00396-201ENST00000411690 GNRH1P01148 92 aa8.37□□□□□ -1.07
LINC00396-201ENST00000411690 GJB1P08034 283 aa8.37□□□□□ -1.07
LINC00396-201ENST00000411690 BMP8BP34820 402 aa8.37□□□□□ -1.07
LINC00396-201ENST00000411690 GJA5P36382 358 aa8.37□□□□□ -1.07
LINC00396-201ENST00000411690 PRMT2P55345 433 aa8.37□□□□□ -1.07
LINC00396-201ENST00000411690 ZNF428Q96B54 188 aa8.37□□□□□ -1.07
LINC00396-201ENST00000411690 DEFB129Q9H1M3 183 aa8.37□□□□□ -1.07
LINC00396-201ENST00000411690 COL3A1P02461 1466 aaPredicted RBP8.37□□□□□ -1.07
LINC00396-201ENST00000411690 MYO3BQ8WXR4 1341 aa8.36□□□□□ -1.07
LINC00396-201ENST00000411690 LAMB1P07942 1786 aa8.36□□□□□ -1.07
LINC00396-201ENST00000411690 ACTN4O43707 911 aaKnown RBP8.36□□□□□ -1.07
LINC00396-201ENST00000411690 WDHD1O75717 1129 aaPredicted RBP8.36□□□□□ -1.07
LINC00396-201ENST00000411690 ADH1BP00325 375 aa8.36□□□□□ -1.07
LINC00396-201ENST00000411690 CCL5P13501 91 aa8.36□□□□□ -1.07
LINC00396-201ENST00000411690 EIF2S2P20042 333 aaKnown RBP8.36□□□□□ -1.07
LINC00396-201ENST00000411690 IREB2P48200 963 aaKnown RBP8.36□□□□□ -1.07
LINC00396-201ENST00000411690 MMP14P50281 582 aa8.36□□□□□ -1.07
LINC00396-201ENST00000411690 LACTBP83111 547 aaPredicted RBP8.36□□□□□ -1.07
LINC00396-201ENST00000411690 AIMP1Q12904 312 aaKnown RBP8.36□□□□□ -1.07
LINC00396-201ENST00000411690 LRIT3Q3SXY7 679 aa8.36□□□□□ -1.07
LINC00396-201ENST00000411690 CC2D1BQ5T0F9 858 aaKnown RBP8.36□□□□□ -1.07
LINC00396-201ENST00000411690 LRP10Q7Z4F1 713 aa8.36□□□□□ -1.07
LINC00396-201ENST00000411690 ANKRD13AQ8IZ07 590 aa8.36□□□□□ -1.07
LINC00396-201ENST00000411690 FAM89AQ96GI7 184 aa8.36□□□□□ -1.07
LINC00396-201ENST00000411690 GDF15Q99988 308 aa8.36□□□□□ -1.07
LINC00396-201ENST00000411690 MXD3Q9BW11 206 aa8.36□□□□□ -1.07
LINC00396-201ENST00000411690 ARHGAP39Q9C0H5 1083 aa8.36□□□□□ -1.07
LINC00396-201ENST00000411690 RNF208Q9H0X6 261 aa8.36□□□□□ -1.07
LINC00396-201ENST00000411690 ZNF646O15015 1829 aaPredicted RBP8.36□□□□□ -1.07
LINC00396-201ENST00000411690 PSME4Q14997 1843 aa8.36□□□□□ -1.07
LINC00396-201ENST00000411690 RPTORQ8N122 1335 aa8.35□□□□□ -1.07
LINC00396-201ENST00000411690 COL1A1P02452 1464 aaPredicted RBP8.35□□□□□ -1.07
LINC00396-201ENST00000411690 WFS1O76024 890 aa8.35□□□□□ -1.07
LINC00396-201ENST00000411690 ANXA1P04083 346 aa8.35□□□□□ -1.07
LINC00396-201ENST00000411690 CFHP08603 1231 aa8.35□□□□□ -1.07
LINC00396-201ENST00000411690 GRK4P32298 578 aa8.35□□□□□ -1.07
LINC00396-201ENST00000411690 FOXC1Q12948 553 aa8.35□□□□□ -1.07
LINC00396-201ENST00000411690 SUPT20HL1Q3ZLR7 823 aa8.35□□□□□ -1.07
LINC00396-201ENST00000411690 DACT2Q5SW24 774 aa8.35□□□□□ -1.07
LINC00396-201ENST00000411690 COPS6Q7L5N1 327 aa8.35□□□□□ -1.07
LINC00396-201ENST00000411690 U2AF1L4Q8WU68 220 aaKnown RBP8.35□□□□□ -1.07
LINC00396-201ENST00000411690 OPTNQ96CV9 577 aa8.35□□□□□ -1.07
LINC00396-201ENST00000411690 GMPR2Q9P2T1 348 aaKnown RBP8.35□□□□□ -1.07
LINC00396-201ENST00000411690 BIN2Q9UBW5 565 aaPredicted RBP8.35□□□□□ -1.07
LINC00396-201ENST00000411690 RANBP2P49792 3224 aaKnown RBP8.35□□□□□ -1.07
LINC00396-201ENST00000411690 COL4A1P02462 1669 aa8.34□□□□□ -1.07
LINC00396-201ENST00000411690 CCL15-CCL14A0A0B4J2E2 113 aa8.34□□□□□ -1.07
LINC00396-201ENST00000411690 TLR2O60603 784 aa8.34□□□□□ -1.07
LINC00396-201ENST00000411690 USP2O75604 605 aaPredicted RBP8.34□□□□□ -1.07
LINC00396-201ENST00000411690 HOXD10P28358 340 aa8.34□□□□□ -1.07
LINC00396-201ENST00000411690 GTF2A2P52657 109 aa8.34□□□□□ -1.07
LINC00396-201ENST00000411690 UBXN2AP68543 259 aa8.34□□□□□ -1.07
LINC00396-201ENST00000411690 NFX1Q12986 1120 aaKnown RBP8.34□□□□□ -1.07
LINC00396-201ENST00000411690 CCL15Q16663 113 aa8.34□□□□□ -1.07
LINC00396-201ENST00000411690 PROSER3Q2NL68 480 aa8.34□□□□□ -1.07
LINC00396-201ENST00000411690 RTL5Q5HYW3 569 aaPredicted RBP8.34□□□□□ -1.07
LINC00396-201ENST00000411690 LCE2CQ5TA81 110 aa8.34□□□□□ -1.07
LINC00396-201ENST00000411690 STRIP1Q5VSL9 837 aa8.34□□□□□ -1.07
LINC00396-201ENST00000411690 TDHQ8IZJ6 230 aa8.34□□□□□ -1.07
LINC00396-201ENST00000411690 CRIPAKQ8N1N5 446 aa8.34□□□□□ -1.07
LINC00396-201ENST00000411690 FAM43AQ8N2R8 423 aa8.34□□□□□ -1.07
LINC00396-201ENST00000411690 RAET1EQ8TD07 263 aa8.34□□□□□ -1.07
LINC00396-201ENST00000411690 BRI3BPQ8WY22 251 aa8.34□□□□□ -1.07
LINC00396-201ENST00000411690 TRIM47Q96LD4 638 aa8.34□□□□□ -1.07
LINC00396-201ENST00000411690 TMEM134Q9H6X4 195 aa8.34□□□□□ -1.07
LINC00396-201ENST00000411690 ELP3Q9H9T3 547 aa8.34□□□□□ -1.07
LINC00396-201ENST00000411690 SEC31BQ9NQW1 1179 aa8.34□□□□□ -1.07
LINC00396-201ENST00000411690 NUDCQ9Y266 331 aa8.34□□□□□ -1.07
LINC00396-201ENST00000411690 RIPOR2Q9Y4F9 1068 aa8.34□□□□□ -1.07
LINC00396-201ENST00000411690 PPP2R3BQ9Y5P8 575 aa8.34□□□□□ -1.07
LINC00396-201ENST00000411690 XDHP47989 1333 aa8.33□□□□□ -1.08
LINC00396-201ENST00000411690 SSC5DA1L4H1 1573 aa8.33□□□□□ -1.08
LINC00396-201ENST00000411690 SGPL1O95470 568 aa8.33□□□□□ -1.08
LINC00396-201ENST00000411690 U2AF1L5P0DN76 240 aaPredicted RBP8.33□□□□□ -1.08
LINC00396-201ENST00000411690 ATP2B4P23634 1241 aa8.33□□□□□ -1.08
LINC00396-201ENST00000411690 DNAJB2P25686 324 aa8.33□□□□□ -1.08
LINC00396-201ENST00000411690 EIF4G2P78344 907 aaKnown RBP eCLIP8.33□□□□□ -1.08
LINC00396-201ENST00000411690 U2AF1Q01081 240 aaKnown RBP eCLIP8.33□□□□□ -1.08
LINC00396-201ENST00000411690 NBPF12Q5TAG4 269 aaPredicted RBP8.33□□□□□ -1.08
LINC00396-201ENST00000411690 KIAA0825Q8IV33 1275 aa8.33□□□□□ -1.08
LINC00396-201ENST00000411690 XAGE3Q8WTP9 111 aa8.33□□□□□ -1.08
LINC00396-201ENST00000411690 ZBED3Q96IU2 234 aaPredicted RBP8.33□□□□□ -1.08
LINC00396-201ENST00000411690 SLC6A16Q9GZN6 736 aa8.33□□□□□ -1.08
LINC00396-201ENST00000411690 SRRDQ9UH36 339 aa8.33□□□□□ -1.08
LINC00396-201ENST00000411690 IRS4O14654 1257 aaPredicted RBP8.32□□□□□ -1.08
LINC00396-201ENST00000411690 TFRCP02786 760 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms