RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 VPS37DQ86XT2 251 aa19.3■□□□□ 0.68
LIMS2-208ENST00000410011 IGDCC4Q8TDY8 1250 aa19.3■□□□□ 0.68
LIMS2-208ENST00000410011 IFNKQ9P0W0 207 aa19.3■□□□□ 0.68
LIMS2-208ENST00000410011 LIFRP42702 1097 aa19.3■□□□□ 0.68
LIMS2-208ENST00000410011 NTRK3Q16288 839 aa19.3■□□□□ 0.68
LIMS2-208ENST00000410011 E4F1Q66K89 784 aaPredicted RBP19.3■□□□□ 0.68
LIMS2-208ENST00000410011 KRT40Q6A162 431 aa19.3■□□□□ 0.68
LIMS2-208ENST00000410011 CYB5R4Q7L1T6 521 aa19.3■□□□□ 0.68
LIMS2-208ENST00000410011 TBC1D10CQ8IV04 446 aa19.3■□□□□ 0.68
LIMS2-208ENST00000410011 MAP3K14Q99558 947 aa19.3■□□□□ 0.68
LIMS2-208ENST00000410011 STK36Q9NRP7 1315 aa19.3■□□□□ 0.68
LIMS2-208ENST00000410011 PDE8BO95263 885 aa19.29■□□□□ 0.68
LIMS2-208ENST00000410011 SFPQP23246 707 aaKnown RBP eCLIP19.29■□□□□ 0.68
LIMS2-208ENST00000410011 CTSWP56202 376 aa19.29■□□□□ 0.68
LIMS2-208ENST00000410011 ARMCX5Q6P1M9 558 aa19.29■□□□□ 0.68
LIMS2-208ENST00000410011 L2HGDHQ9H9P8 463 aa19.29■□□□□ 0.68
LIMS2-208ENST00000410011 GJB4Q9NTQ9 266 aa19.29■□□□□ 0.68
LIMS2-208ENST00000410011 RESP18Q5W5W9 173 aa19.29■□□□□ 0.68
LIMS2-208ENST00000410011 ZNF592Q92610 1267 aa19.29■□□□□ 0.68
LIMS2-208ENST00000410011 DDX41Q9UJV9 622 aaKnown RBP19.29■□□□□ 0.68
LIMS2-208ENST00000410011 NID2Q14112 1375 aa19.28■□□□□ 0.68
LIMS2-208ENST00000410011 MROH7-TTC4A0A0A0MT08 1334 aa19.28■□□□□ 0.68
LIMS2-208ENST00000410011 TOGARAM1Q9Y4F4 1720 aa19.28■□□□□ 0.68
LIMS2-208ENST00000410011 TCRBV5S4A2TA0A5A2 114 aa19.28■□□□□ 0.68
LIMS2-208ENST00000410011 CCP110O43303 1012 aa19.28■□□□□ 0.68
LIMS2-208ENST00000410011 SMC2O95347 1197 aa19.28■□□□□ 0.68
LIMS2-208ENST00000410011 DNAJC10Q8IXB1 793 aa19.28■□□□□ 0.68
LIMS2-208ENST00000410011 HSD3B7Q9H2F3 369 aa19.28■□□□□ 0.68
LIMS2-208ENST00000410011 GREM2Q9H772 168 aa19.28■□□□□ 0.68
LIMS2-208ENST00000410011 TBC1D2BQ9UPU7 963 aa19.28■□□□□ 0.68
LIMS2-208ENST00000410011 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.28■□□□□ 0.68
LIMS2-208ENST00000410011 CUTAO60888 179 aa19.28■□□□□ 0.68
LIMS2-208ENST00000410011 SHC4Q6S5L8 630 aa19.28■□□□□ 0.68
LIMS2-208ENST00000410011 TMC6Q7Z403 805 aa19.28■□□□□ 0.68
LIMS2-208ENST00000410011 STRBPQ96SI9 672 aaKnown RBP19.28■□□□□ 0.68
LIMS2-208ENST00000410011 PIH1D3Q9NQM4 214 aaKnown RBP19.28■□□□□ 0.68
LIMS2-208ENST00000410011 ZBTB43O43298 467 aa19.27■□□□□ 0.68
LIMS2-208ENST00000410011 CBFA2T2O43439 604 aa19.27■□□□□ 0.68
LIMS2-208ENST00000410011 FANCCQ00597 558 aa19.27■□□□□ 0.68
LIMS2-208ENST00000410011 TRMT1Q9NXH9 659 aaKnown RBP19.27■□□□□ 0.68
LIMS2-208ENST00000410011 ZNF215Q9UL58 517 aaPredicted RBP19.27■□□□□ 0.68
LIMS2-208ENST00000410011 MORC2Q9Y6X9 1032 aaPredicted RBP19.27■□□□□ 0.68
LIMS2-208ENST00000410011 ZNF532Q9HCE3 1301 aa19.27■□□□□ 0.67
LIMS2-208ENST00000410011 SLU7O95391 586 aaKnown RBP19.26■□□□□ 0.67
LIMS2-208ENST00000410011 PDE6AP16499 860 aa19.26■□□□□ 0.67
LIMS2-208ENST00000410011 CDC27P30260 824 aa19.26■□□□□ 0.67
LIMS2-208ENST00000410011 IARSP41252 1262 aaKnown RBP19.26■□□□□ 0.67
LIMS2-208ENST00000410011 ZNF397Q8NF99 534 aaPredicted RBP19.26■□□□□ 0.67
LIMS2-208ENST00000410011 CCDC85AQ96PX6 553 aaPredicted RBP19.26■□□□□ 0.67
LIMS2-208ENST00000410011 MTA3Q9BTC8 594 aa19.26■□□□□ 0.67
LIMS2-208ENST00000410011 LY9Q9HBG7 655 aa19.26■□□□□ 0.67
LIMS2-208ENST00000410011 CNNM1Q9NRU3 951 aa19.26■□□□□ 0.67
LIMS2-208ENST00000410011 PATL2C9JE40 543 aaKnown RBP19.26■□□□□ 0.67
LIMS2-208ENST00000410011 MARCKSP29966 332 aaPredicted RBP19.26■□□□□ 0.67
LIMS2-208ENST00000410011 CCDC102BQ68D86 513 aa19.26■□□□□ 0.67
LIMS2-208ENST00000410011 FBXW7Q969H0 707 aa19.26■□□□□ 0.67
LIMS2-208ENST00000410011 PPP1R13BQ96KQ4 1090 aa19.26■□□□□ 0.67
LIMS2-208ENST00000410011 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.26■□□□□ 0.67
LIMS2-208ENST00000410011 FAM217BQ9NTX9 383 aaPredicted RBP19.26■□□□□ 0.67
LIMS2-208ENST00000410011 LRP6O75581 1613 aa19.25■□□□□ 0.67
LIMS2-208ENST00000410011 BIN1O00499 593 aa19.25■□□□□ 0.67
LIMS2-208ENST00000410011 MYL5Q02045 173 aa19.25■□□□□ 0.67
LIMS2-208ENST00000410011 TRIM29Q14134 588 aa19.25■□□□□ 0.67
LIMS2-208ENST00000410011 PIGBQ92521 554 aa19.25■□□□□ 0.67
LIMS2-208ENST00000410011 WASF1Q92558 559 aa19.25■□□□□ 0.67
LIMS2-208ENST00000410011 AK7Q96M32 723 aa19.25■□□□□ 0.67
LIMS2-208ENST00000410011 SPDYE4A6NLX3 237 aa19.25■□□□□ 0.67
LIMS2-208ENST00000410011 PDE8AO60658 829 aa19.25■□□□□ 0.67
LIMS2-208ENST00000410011 FGFR2P21802 821 aa19.25■□□□□ 0.67
LIMS2-208ENST00000410011 RAB11FIP4Q86YS3 637 aa19.25■□□□□ 0.67
LIMS2-208ENST00000410011 LPIN2Q92539 896 aa19.25■□□□□ 0.67
LIMS2-208ENST00000410011 TMX1Q9H3N1 280 aa19.25■□□□□ 0.67
LIMS2-208ENST00000410011 CNNM2Q9H8M5 875 aa19.25■□□□□ 0.67
LIMS2-208ENST00000410011 B4E1Z4 1266 aa19.24■□□□□ 0.67
LIMS2-208ENST00000410011 ERVV-1B6SEH8 477 aa19.24■□□□□ 0.67
LIMS2-208ENST00000410011 IRS4O14654 1257 aaPredicted RBP19.24■□□□□ 0.67
LIMS2-208ENST00000410011 NAA30Q147X3 362 aaPredicted RBP19.24■□□□□ 0.67
LIMS2-208ENST00000410011 HLFQ16534 295 aa19.24■□□□□ 0.67
LIMS2-208ENST00000410011 CCDC93Q567U6 631 aa19.24■□□□□ 0.67
LIMS2-208ENST00000410011 AIFM3Q96NN9 605 aa19.24■□□□□ 0.67
LIMS2-208ENST00000410011 DENND2AQ9ULE3 1009 aa19.24■□□□□ 0.67
LIMS2-208ENST00000410011 ASAP1Q9ULH1 1129 aa19.24■□□□□ 0.67
LIMS2-208ENST00000410011 MROH5Q6ZUA9 1318 aa19.24■□□□□ 0.67
LIMS2-208ENST00000410011 MYH3P11055 1940 aa19.24■□□□□ 0.67
LIMS2-208ENST00000410011 IDH1O75874 414 aaKnown RBP19.24■□□□□ 0.67
LIMS2-208ENST00000410011 APPP05067 770 aa19.24■□□□□ 0.67
LIMS2-208ENST00000410011 IFNAR1P17181 557 aa19.24■□□□□ 0.67
LIMS2-208ENST00000410011 PUM3Q15397 648 aaKnown RBP19.24■□□□□ 0.67
LIMS2-208ENST00000410011 NKX2-3Q8TAU0 364 aa19.24■□□□□ 0.67
LIMS2-208ENST00000410011 NOL10Q9BSC4 688 aaKnown RBP19.24■□□□□ 0.67
LIMS2-208ENST00000410011 UBN2Q6ZU65 1347 aa19.23■□□□□ 0.67
LIMS2-208ENST00000410011 FMNL1O95466 1100 aaPredicted RBP19.23■□□□□ 0.67
LIMS2-208ENST00000410011 RCAN1P53805 252 aa19.23■□□□□ 0.67
LIMS2-208ENST00000410011 GNL2Q13823 731 aaKnown RBP19.23■□□□□ 0.67
LIMS2-208ENST00000410011 KRBA2Q6ZNG9 492 aa19.23■□□□□ 0.67
LIMS2-208ENST00000410011 FCHSD1Q86WN1 690 aa19.23■□□□□ 0.67
LIMS2-208ENST00000410011 SYNE4Q8N205 404 aa19.23■□□□□ 0.67
LIMS2-208ENST00000410011 AIDAQ96BJ3 306 aa19.23■□□□□ 0.67
LIMS2-208ENST00000410011 PRDM10Q9NQV6 1147 aa19.23■□□□□ 0.67
LIMS2-208ENST00000410011 ZNF330Q9Y3S2 320 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms