RNA–Protein interactions for RNA: ENST00000409286.5

LIMS2-204, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-204ENST00000409286 RIOK1Q9BRS2 568 aaKnown RBP22.7■■□□□ 1.22
LIMS2-204ENST00000409286 MTA3Q9BTC8 594 aa22.7■■□□□ 1.22
LIMS2-204ENST00000409286 RNF41Q9H4P4 317 aaPredicted RBP22.7■■□□□ 1.22
LIMS2-204ENST00000409286 TNRC6CQ9HCJ0 1690 aaKnown RBP22.7■■□□□ 1.22
LIMS2-204ENST00000409286 SERPINB2P05120 415 aa22.69■■□□□ 1.22
LIMS2-204ENST00000409286 LIFRP42702 1097 aa22.69■■□□□ 1.22
LIMS2-204ENST00000409286 CTDSPL2Q05D32 466 aa22.69■■□□□ 1.22
LIMS2-204ENST00000409286 TTC6Q86TZ1 520 aa22.69■■□□□ 1.22
LIMS2-204ENST00000409286 TFCP2L1Q9NZI6 479 aa22.69■■□□□ 1.22
LIMS2-204ENST00000409286 ANAPC4Q9UJX5 808 aa22.69■■□□□ 1.22
LIMS2-204ENST00000409286 TIAM2Q8IVF5 1701 aa22.69■■□□□ 1.22
LIMS2-204ENST00000409286 FDPSP14324 419 aaKnown RBP22.68■■□□□ 1.22
LIMS2-204ENST00000409286 CRY2Q49AN0 593 aa22.68■■□□□ 1.22
LIMS2-204ENST00000409286 ATL3Q6DD88 541 aa22.68■■□□□ 1.22
LIMS2-204ENST00000409286 FAM173BQ6P4H8 233 aa22.68■■□□□ 1.22
LIMS2-204ENST00000409286 SGMS1Q86VZ5 419 aa22.68■■□□□ 1.22
LIMS2-204ENST00000409286 CPLX1O14810 134 aa22.68■■□□□ 1.22
LIMS2-204ENST00000409286 NASPP49321 788 aaPredicted RBP22.68■■□□□ 1.22
LIMS2-204ENST00000409286 GIMAP6Q6P9H5 292 aa22.68■■□□□ 1.22
LIMS2-204ENST00000409286 C15orf52Q6ZUT6 534 aaKnown RBP22.68■■□□□ 1.22
LIMS2-204ENST00000409286 RPGRQ92834 1020 aaKnown RBP22.68■■□□□ 1.22
LIMS2-204ENST00000409286 NSUN4Q96CB9 384 aaKnown RBP22.68■■□□□ 1.22
LIMS2-204ENST00000409286 CFAP45Q9UL16 551 aa22.68■■□□□ 1.22
LIMS2-204ENST00000409286 TXNRD1Q16881 649 aa22.67■■□□□ 1.22
LIMS2-204ENST00000409286 SPTY2D1Q68D10 685 aaPredicted RBP22.67■■□□□ 1.22
LIMS2-204ENST00000409286 NKX2-3Q8TAU0 364 aa22.67■■□□□ 1.22
LIMS2-204ENST00000409286 SPATA32Q96LK8 384 aa22.67■■□□□ 1.22
LIMS2-204ENST00000409286 BRIP1Q9BX63 1249 aa22.67■■□□□ 1.22
LIMS2-204ENST00000409286 ZSWIM5Q9P217 1185 aa22.67■■□□□ 1.22
LIMS2-204ENST00000409286 ANKIB1Q9P2G1 1089 aa22.67■■□□□ 1.22
LIMS2-204ENST00000409286 TACC3Q9Y6A5 838 aa22.67■■□□□ 1.22
LIMS2-204ENST00000409286 CACNA1SQ13698 1873 aa22.67■■□□□ 1.22
LIMS2-204ENST00000409286 XDHP47989 1333 aa22.66■■□□□ 1.22
LIMS2-204ENST00000409286 PPARAQ07869 468 aa22.66■■□□□ 1.22
LIMS2-204ENST00000409286 TMEM67Q5HYA8 995 aa22.66■■□□□ 1.22
LIMS2-204ENST00000409286 LEO1Q8WVC0 666 aaPredicted RBP22.66■■□□□ 1.22
LIMS2-204ENST00000409286 RBM17Q96I25 401 aaKnown RBP22.66■■□□□ 1.22
LIMS2-204ENST00000409286 RBSNQ9H1K0 784 aa22.66■■□□□ 1.22
LIMS2-204ENST00000409286 LY9Q9HBG7 655 aa22.66■■□□□ 1.22
LIMS2-204ENST00000409286 KDM4AO75164 1064 aa22.65■■□□□ 1.22
LIMS2-204ENST00000409286 CDKL5O76039 1030 aa22.65■■□□□ 1.22
LIMS2-204ENST00000409286 METAP2P50579 478 aaKnown RBP eCLIP22.65■■□□□ 1.22
LIMS2-204ENST00000409286 PROM2Q8N271 834 aa22.65■■□□□ 1.22
LIMS2-204ENST00000409286 ZNF384Q8TF68 577 aa22.65■■□□□ 1.22
LIMS2-204ENST00000409286 INCENPQ9NQS7 918 aa22.65■■□□□ 1.22
LIMS2-204ENST00000409286 TFIP11Q9UBB9 837 aaKnown RBP22.65■■□□□ 1.22
LIMS2-204ENST00000409286 ORC3Q9UBD5 711 aaPredicted RBP22.65■■□□□ 1.22
LIMS2-204ENST00000409286 IFIT3O14879 490 aaKnown RBP22.65■■□□□ 1.22
LIMS2-204ENST00000409286 MECOMQ03112 1051 aa22.65■■□□□ 1.22
LIMS2-204ENST00000409286 CPLX2Q6PUV4 134 aaKnown RBP22.65■■□□□ 1.22
LIMS2-204ENST00000409286 APOA5Q6Q788 366 aa22.65■■□□□ 1.22
LIMS2-204ENST00000409286 TSPY26PQ9H489 355 aa22.65■■□□□ 1.22
LIMS2-204ENST00000409286 ZBTB43O43298 467 aa22.64■■□□□ 1.21
LIMS2-204ENST00000409286 SART3Q15020 963 aaKnown RBP22.64■■□□□ 1.21
LIMS2-204ENST00000409286 NFXL1Q6ZNB6 911 aa22.64■■□□□ 1.21
LIMS2-204ENST00000409286 TXNRD3Q86VQ6 643 aa22.64■■□□□ 1.21
LIMS2-204ENST00000409286 ANP32BQ92688 251 aaKnown RBP22.64■■□□□ 1.21
LIMS2-204ENST00000409286 BBOX1O75936 387 aa22.63■■□□□ 1.21
LIMS2-204ENST00000409286 HOXA10P31260 410 aaPredicted RBP22.63■■□□□ 1.21
LIMS2-204ENST00000409286 DYNLL1P63167 89 aaKnown RBP22.63■■□□□ 1.21
LIMS2-204ENST00000409286 CHAF1AQ13111 956 aaPredicted RBP22.63■■□□□ 1.21
LIMS2-204ENST00000409286 TMTC2Q8N394 836 aa22.63■■□□□ 1.21
LIMS2-204ENST00000409286 WDR66Q8TBY9 1149 aa22.63■■□□□ 1.21
LIMS2-204ENST00000409286 SDR42E1Q8WUS8 393 aa22.63■■□□□ 1.21
LIMS2-204ENST00000409286 ZNF396Q96N95 335 aaPredicted RBP22.63■■□□□ 1.21
LIMS2-204ENST00000409286 KLRG2A4D1S0 409 aaPredicted RBP22.62■■□□□ 1.21
LIMS2-204ENST00000409286 PLSCR1O15162 318 aa22.62■■□□□ 1.21
LIMS2-204ENST00000409286 ADD1P35611 737 aaKnown RBP22.62■■□□□ 1.21
LIMS2-204ENST00000409286 TDRD7Q8NHU6 1098 aaKnown RBP22.62■■□□□ 1.21
LIMS2-204ENST00000409286 C8orf76Q96K31 380 aa22.62■■□□□ 1.21
LIMS2-204ENST00000409286 GOLGA6L4A6NEF3 574 aa22.62■■□□□ 1.21
LIMS2-204ENST00000409286 CCDC69A6NI79 296 aa22.62■■□□□ 1.21
LIMS2-204ENST00000409286 POLRMTO00411 1230 aaKnown RBP22.62■■□□□ 1.21
LIMS2-204ENST00000409286 PCP11498 1178 aaKnown RBP22.62■■□□□ 1.21
LIMS2-204ENST00000409286 ATP2B4P23634 1241 aa22.62■■□□□ 1.21
LIMS2-204ENST00000409286 SYNE3Q6ZMZ3 975 aa22.62■■□□□ 1.21
LIMS2-204ENST00000409286 ZNF804AQ7Z570 1209 aa22.62■■□□□ 1.21
LIMS2-204ENST00000409286 FBXO18Q8NFZ0 1043 aa22.62■■□□□ 1.21
LIMS2-204ENST00000409286 RCOR1Q9UKL0 485 aa22.62■■□□□ 1.21
LIMS2-204ENST00000409286 SLC12A7Q9Y666 1083 aa22.62■■□□□ 1.21
LIMS2-204ENST00000409286 NID2Q14112 1375 aa22.61■■□□□ 1.21
LIMS2-204ENST00000409286 FOSBP53539 338 aa22.61■■□□□ 1.21
LIMS2-204ENST00000409286 DDR1Q08345 913 aa22.61■■□□□ 1.21
LIMS2-204ENST00000409286 CRAMP1Q96RY5 1269 aa22.61■■□□□ 1.21
LIMS2-204ENST00000409286 CRNKL1Q9BZJ0 848 aaKnown RBP22.61■■□□□ 1.21
LIMS2-204ENST00000409286 SENP2Q9HC62 589 aa22.61■■□□□ 1.21
LIMS2-204ENST00000409286 ERICH2A1L162 156 aa22.6■■□□□ 1.21
LIMS2-204ENST00000409286 MINDY4BA8MYZ0 360 aa22.6■■□□□ 1.21
LIMS2-204ENST00000409286 RCAN1P53805 252 aa22.6■■□□□ 1.21
LIMS2-204ENST00000409286 CCDC173Q0VFZ6 552 aa22.6■■□□□ 1.21
LIMS2-204ENST00000409286 RRP12Q5JTH9 1297 aaKnown RBP22.6■■□□□ 1.21
LIMS2-204ENST00000409286 RAB11FIP4Q86YS3 637 aa22.6■■□□□ 1.21
LIMS2-204ENST00000409286 ESR2Q92731 530 aa22.6■■□□□ 1.21
LIMS2-204ENST00000409286 TOMM22Q9NS69 142 aa22.6■■□□□ 1.21
LIMS2-204ENST00000409286 CHD4Q14839 1912 aa22.6■■□□□ 1.21
LIMS2-204ENST00000409286 GOLGA8AA7E2F4 631 aa22.59■■□□□ 1.21
LIMS2-204ENST00000409286 FGRP09769 529 aa22.59■■□□□ 1.21
LIMS2-204ENST00000409286 GPSM2P81274 684 aa22.59■■□□□ 1.21
LIMS2-204ENST00000409286 WTAPQ15007 396 aa22.59■■□□□ 1.21
LIMS2-204ENST00000409286 PPP1R9BQ96SB3 815 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms