RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 AK2P54819 239 aa11.62□□□□□ -0.55
POLR1A-202ENST00000409024 NUCB2P80303 420 aa11.62□□□□□ -0.55
POLR1A-202ENST00000409024 TXNRD3Q86VQ6 643 aa11.62□□□□□ -0.55
POLR1A-202ENST00000409024 IFNL3Q8IZI9 196 aa11.62□□□□□ -0.55
POLR1A-202ENST00000409024 NSUN4Q96CB9 384 aaKnown RBP11.62□□□□□ -0.55
POLR1A-202ENST00000409024 FAM163AQ96GL9 167 aaPredicted RBP11.62□□□□□ -0.55
POLR1A-202ENST00000409024 MTA3Q9BTC8 594 aa11.62□□□□□ -0.55
POLR1A-202ENST00000409024 VPS33BQ9H267 617 aa11.62□□□□□ -0.55
POLR1A-202ENST00000409024 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.62□□□□□ -0.55
POLR1A-202ENST00000409024 ARFGEF1Q9Y6D6 1849 aa11.62□□□□□ -0.55
POLR1A-202ENST00000409024 WTIPA6NIX2 430 aaPredicted RBP11.61□□□□□ -0.55
POLR1A-202ENST00000409024 E7EWF7 191 aa11.61□□□□□ -0.55
POLR1A-202ENST00000409024 FOXP2O15409 715 aa11.61□□□□□ -0.55
POLR1A-202ENST00000409024 MBD4O95243 580 aa11.61□□□□□ -0.55
POLR1A-202ENST00000409024 LMNB1P20700 586 aa11.61□□□□□ -0.55
POLR1A-202ENST00000409024 LBX1P52954 281 aa11.61□□□□□ -0.55
POLR1A-202ENST00000409024 FKBP1AP62942 108 aaKnown RBP11.61□□□□□ -0.55
POLR1A-202ENST00000409024 EXOSC10Q01780 885 aaKnown RBP11.61□□□□□ -0.55
POLR1A-202ENST00000409024 SLFNL1Q499Z3 407 aa11.61□□□□□ -0.55
POLR1A-202ENST00000409024 SOGA3Q5TF21 947 aa11.61□□□□□ -0.55
POLR1A-202ENST00000409024 PODNQ7Z5L7 613 aa11.61□□□□□ -0.55
POLR1A-202ENST00000409024 C7orf43Q8WVR3 580 aa11.61□□□□□ -0.55
POLR1A-202ENST00000409024 AGXT2Q9BYV1 514 aa11.61□□□□□ -0.55
POLR1A-202ENST00000409024 IQSEC3Q9UPP2 1182 aaPredicted RBP11.61□□□□□ -0.55
POLR1A-202ENST00000409024 MAST2Q6P0Q8 1798 aa11.61□□□□□ -0.55
POLR1A-202ENST00000409024 COL11A2P13942 1736 aaPredicted RBP11.6□□□□□ -0.55
POLR1A-202ENST00000409024 MYH13Q9UKX3 1938 aa11.6□□□□□ -0.55
POLR1A-202ENST00000409024 GSG1L2A8MUP6 293 aa11.6□□□□□ -0.55
POLR1A-202ENST00000409024 BAG3O95817 575 aa11.6□□□□□ -0.55
POLR1A-202ENST00000409024 APPP05067 770 aa11.6□□□□□ -0.55
POLR1A-202ENST00000409024 PPP4CP60510 307 aa11.6□□□□□ -0.55
POLR1A-202ENST00000409024 MECOMQ03112 1051 aa11.6□□□□□ -0.55
POLR1A-202ENST00000409024 TRDNQ13061 729 aa11.6□□□□□ -0.55
POLR1A-202ENST00000409024 DPY19L2Q6NUT2 758 aa11.6□□□□□ -0.55
POLR1A-202ENST00000409024 DZIP1Q86YF9 867 aaKnown RBP11.6□□□□□ -0.55
POLR1A-202ENST00000409024 NCOA7Q8NI08 942 aa11.6□□□□□ -0.55
POLR1A-202ENST00000409024 RIOK1Q9BRS2 568 aaKnown RBP11.6□□□□□ -0.55
POLR1A-202ENST00000409024 NAPBQ9H115 298 aa11.6□□□□□ -0.55
POLR1A-202ENST00000409024 SLKQ9H2G2 1235 aaPredicted RBP11.6□□□□□ -0.55
POLR1A-202ENST00000409024 RNF41Q9H4P4 317 aaPredicted RBP11.6□□□□□ -0.55
POLR1A-202ENST00000409024 CNNM2Q9H8M5 875 aa11.6□□□□□ -0.55
POLR1A-202ENST00000409024 ATP8A2Q9NTI2 1148 aa11.6□□□□□ -0.55
POLR1A-202ENST00000409024 ANAPC4Q9UJX5 808 aa11.6□□□□□ -0.55
POLR1A-202ENST00000409024 SLC4A4Q9Y6R1 1079 aa11.6□□□□□ -0.55
POLR1A-202ENST00000409024 BRCA1P38398 1863 aaKnown RBP11.59□□□□□ -0.55
POLR1A-202ENST00000409024 CACNA1SQ13698 1873 aa11.59□□□□□ -0.55
POLR1A-202ENST00000409024 CNTNAP1P78357 1384 aa11.59□□□□□ -0.55
POLR1A-202ENST00000409024 CCDC85CA6NKD9 419 aa11.59□□□□□ -0.55
POLR1A-202ENST00000409024 PLCG2P16885 1265 aa11.59□□□□□ -0.55
POLR1A-202ENST00000409024 MCM5P33992 734 aa11.59□□□□□ -0.55
POLR1A-202ENST00000409024 CHAF1AQ13111 956 aaPredicted RBP11.59□□□□□ -0.55
POLR1A-202ENST00000409024 CHADLQ6NUI6 762 aa11.59□□□□□ -0.55
POLR1A-202ENST00000409024 RALYLQ86SE5 291 aaKnown RBP11.59□□□□□ -0.55
POLR1A-202ENST00000409024 RTKN2Q8IZC4 609 aa11.59□□□□□ -0.55
POLR1A-202ENST00000409024 TTLL6Q8N841 843 aa11.59□□□□□ -0.55
POLR1A-202ENST00000409024 NOL10Q9BSC4 688 aaKnown RBP11.59□□□□□ -0.55
POLR1A-202ENST00000409024 MRIQ9BWK5 157 aa11.59□□□□□ -0.55
POLR1A-202ENST00000409024 CRNKL1Q9BZJ0 848 aaKnown RBP11.59□□□□□ -0.55
POLR1A-202ENST00000409024 ARMT1Q9H993 441 aa11.59□□□□□ -0.55
POLR1A-202ENST00000409024 WBP1LQ9NX94 342 aa11.59□□□□□ -0.55
POLR1A-202ENST00000409024 SBF1O95248 1867 aa11.59□□□□□ -0.55
POLR1A-202ENST00000409024 CCDC88AQ3V6T2 1871 aa11.58□□□□□ -0.56
POLR1A-202ENST00000409024 MYO5AQ9Y4I1 1855 aaKnown RBP11.58□□□□□ -0.56
POLR1A-202ENST00000409024 G3V3G9 751 aa11.58□□□□□ -0.56
POLR1A-202ENST00000409024 CHRNA5P30532 468 aa11.58□□□□□ -0.56
POLR1A-202ENST00000409024 EVCP57679 992 aa11.58□□□□□ -0.56
POLR1A-202ENST00000409024 DCAF8Q5TAQ9 597 aa11.58□□□□□ -0.56
POLR1A-202ENST00000409024 STOX1Q6ZVD7 989 aa11.58□□□□□ -0.56
POLR1A-202ENST00000409024 LCORLQ8N3X6 602 aa11.58□□□□□ -0.56
POLR1A-202ENST00000409024 KRT23Q9C075 422 aa11.58□□□□□ -0.56
POLR1A-202ENST00000409024 DLEC1Q9Y238 1755 aa11.58□□□□□ -0.56
POLR1A-202ENST00000409024 POTECB2RU33 542 aa11.57□□□□□ -0.56
POLR1A-202ENST00000409024 PRDX5P30044 214 aa11.57□□□□□ -0.56
POLR1A-202ENST00000409024 TDO2P48775 406 aa11.57□□□□□ -0.56
POLR1A-202ENST00000409024 VEGFBP49765 207 aa11.57□□□□□ -0.56
POLR1A-202ENST00000409024 RASSF7Q02833 373 aa11.57□□□□□ -0.56
POLR1A-202ENST00000409024 TOB2Q14106 344 aaPredicted RBP11.57□□□□□ -0.56
POLR1A-202ENST00000409024 RAB3GAP1Q15042 981 aa11.57□□□□□ -0.56
POLR1A-202ENST00000409024 SBK1Q52WX2 424 aa11.57□□□□□ -0.56
POLR1A-202ENST00000409024 CCDC93Q567U6 631 aa11.57□□□□□ -0.56
POLR1A-202ENST00000409024 TTLL5Q6EMB2 1281 aa11.57□□□□□ -0.56
POLR1A-202ENST00000409024 CLEC17AQ6ZS10 378 aa11.57□□□□□ -0.56
POLR1A-202ENST00000409024 MB21D2Q8IYB1 491 aaPredicted RBP11.57□□□□□ -0.56
POLR1A-202ENST00000409024 ZNF384Q8TF68 577 aa11.57□□□□□ -0.56
POLR1A-202ENST00000409024 STAG1Q8WVM7 1258 aa11.57□□□□□ -0.56
POLR1A-202ENST00000409024 ZNF274Q96GC6 653 aaPredicted RBP11.57□□□□□ -0.56
POLR1A-202ENST00000409024 TMEM87BQ96K49 555 aa11.57□□□□□ -0.56
POLR1A-202ENST00000409024 PSMD1Q99460 953 aa11.57□□□□□ -0.56
POLR1A-202ENST00000409024 LLPHQ9BRT6 129 aaKnown RBP11.57□□□□□ -0.56
POLR1A-202ENST00000409024 LAMA4Q16363 1823 aa11.57□□□□□ -0.56
POLR1A-202ENST00000409024 PDE4DIPQ5VU43 2346 aa11.57□□□□□ -0.56
POLR1A-202ENST00000409024 GPR75-ASB3A0A0A6YYF3 556 aa11.56□□□□□ -0.56
POLR1A-202ENST00000409024 SLC3A2P08195 630 aaKnown RBP11.56□□□□□ -0.56
POLR1A-202ENST00000409024 FGRP09769 529 aa11.56□□□□□ -0.56
POLR1A-202ENST00000409024 PTMSP20962 102 aa11.56□□□□□ -0.56
POLR1A-202ENST00000409024 FGD1P98174 961 aa11.56□□□□□ -0.56
POLR1A-202ENST00000409024 HDLBPQ00341 1268 aaKnown RBP11.56□□□□□ -0.56
POLR1A-202ENST00000409024 MFSD14BQ5SR56 506 aa11.56□□□□□ -0.56
POLR1A-202ENST00000409024 AKNAD1Q5T1N1 836 aa11.56□□□□□ -0.56
POLR1A-202ENST00000409024 STRIP1Q5VSL9 837 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms