RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 ZBTB48P10074 688 aaPredicted RBP12.92□□□□□ -0.34
RPAIN-204ENST00000405578 TNNI3KQ59H18 835 aa12.92□□□□□ -0.34
RPAIN-204ENST00000405578 DACT2Q5SW24 774 aa12.92□□□□□ -0.34
RPAIN-204ENST00000405578 CNKSR2Q8WXI2 1034 aa12.92□□□□□ -0.34
RPAIN-204ENST00000405578 FPGT-TNNI3KV9GXZ4 949 aa12.92□□□□□ -0.34
RPAIN-204ENST00000405578 WTIPA6NIX2 430 aaPredicted RBP12.91□□□□□ -0.34
RPAIN-204ENST00000405578 MYCP01106 439 aaPredicted RBP12.91□□□□□ -0.34
RPAIN-204ENST00000405578 TIMM10P62072 90 aa12.91□□□□□ -0.34
RPAIN-204ENST00000405578 SP3Q02447 781 aa12.91□□□□□ -0.34
RPAIN-204ENST00000405578 SLC4A8Q2Y0W8 1093 aa12.91□□□□□ -0.34
RPAIN-204ENST00000405578 SLC9C1Q4G0N8 1177 aa12.91□□□□□ -0.34
RPAIN-204ENST00000405578 CCDC158Q5M9N0 1113 aa12.91□□□□□ -0.34
RPAIN-204ENST00000405578 AACSQ86V21 672 aa12.91□□□□□ -0.34
RPAIN-204ENST00000405578 BCL11AQ9H165 835 aa12.91□□□□□ -0.34
RPAIN-204ENST00000405578 IL1RAPL2Q9NP60 686 aa12.91□□□□□ -0.34
RPAIN-204ENST00000405578 MYO3BQ8WXR4 1341 aa12.9□□□□□ -0.34
RPAIN-204ENST00000405578 KLRK1P26718 216 aa12.9□□□□□ -0.34
RPAIN-204ENST00000405578 GYG1P46976 350 aa12.9□□□□□ -0.34
RPAIN-204ENST00000405578 FBXO33Q7Z6M2 555 aa12.9□□□□□ -0.34
RPAIN-204ENST00000405578 XAGE2Q96GT9 111 aa12.9□□□□□ -0.34
RPAIN-204ENST00000405578 GPATCH3Q96I76 525 aa12.9□□□□□ -0.34
RPAIN-204ENST00000405578 FAM84BQ96KN1 310 aaPredicted RBP12.9□□□□□ -0.34
RPAIN-204ENST00000405578 CD209Q9NNX6 404 aa12.9□□□□□ -0.34
RPAIN-204ENST00000405578 RBM27Q9P2N5 1060 aaKnown RBP12.9□□□□□ -0.34
RPAIN-204ENST00000405578 PTCH2Q9Y6C5 1203 aa12.9□□□□□ -0.34
RPAIN-204ENST00000405578 SEMA3EO15041 775 aa12.89□□□□□ -0.35
RPAIN-204ENST00000405578 UQCRFS1P1P0C7P4 283 aa12.89□□□□□ -0.35
RPAIN-204ENST00000405578 IL1R1P14778 569 aa12.89□□□□□ -0.35
RPAIN-204ENST00000405578 BCAMP50895 628 aa12.89□□□□□ -0.35
RPAIN-204ENST00000405578 TTC39AQ5SRH9 613 aa12.89□□□□□ -0.35
RPAIN-204ENST00000405578 ANKRD45Q5TZF3 282 aa12.89□□□□□ -0.35
RPAIN-204ENST00000405578 OTUD7BQ6GQQ9 843 aa12.89□□□□□ -0.35
RPAIN-204ENST00000405578 TXNRD3Q86VQ6 643 aa12.89□□□□□ -0.35
RPAIN-204ENST00000405578 SMC5Q8IY18 1101 aa12.89□□□□□ -0.35
RPAIN-204ENST00000405578 CCDC136Q96JN2 1154 aa12.89□□□□□ -0.35
RPAIN-204ENST00000405578 RANBP2P49792 3224 aaKnown RBP12.88□□□□□ -0.35
RPAIN-204ENST00000405578 IGHDP01880 384 aa12.88□□□□□ -0.35
RPAIN-204ENST00000405578 GJA5P36382 358 aa12.88□□□□□ -0.35
RPAIN-204ENST00000405578 MAP3K11Q16584 847 aa12.88□□□□□ -0.35
RPAIN-204ENST00000405578 STRIP1Q5VSL9 837 aa12.88□□□□□ -0.35
RPAIN-204ENST00000405578 CCDC102BQ68D86 513 aa12.88□□□□□ -0.35
RPAIN-204ENST00000405578 NBPF11Q86T75 865 aa12.88□□□□□ -0.35
RPAIN-204ENST00000405578 KIAA0825Q8IV33 1275 aa12.88□□□□□ -0.35
RPAIN-204ENST00000405578 EAF2Q96CJ1 260 aaPredicted RBP12.88□□□□□ -0.35
RPAIN-204ENST00000405578 CCDC8Q9H0W5 538 aaPredicted RBP12.88□□□□□ -0.35
RPAIN-204ENST00000405578 DEFB129Q9H1M3 183 aa12.88□□□□□ -0.35
RPAIN-204ENST00000405578 IRS2Q9Y4H2 1338 aa12.88□□□□□ -0.35
RPAIN-204ENST00000405578 COL6A3P12111 3177 aa12.87□□□□□ -0.35
RPAIN-204ENST00000405578 PPP1R12BO60237 982 aaPredicted RBP12.87□□□□□ -0.35
RPAIN-204ENST00000405578 ADORA1P30542 326 aa12.87□□□□□ -0.35
RPAIN-204ENST00000405578 TTLL5Q6EMB2 1281 aa12.87□□□□□ -0.35
RPAIN-204ENST00000405578 B4GALNT3Q6L9W6 998 aa12.87□□□□□ -0.35
RPAIN-204ENST00000405578 TDRD7Q8NHU6 1098 aaKnown RBP12.87□□□□□ -0.35
RPAIN-204ENST00000405578 TBC1D22AQ8WUA7 517 aa12.87□□□□□ -0.35
RPAIN-204ENST00000405578 ZBED3Q96IU2 234 aaPredicted RBP12.87□□□□□ -0.35
RPAIN-204ENST00000405578 PTPN18Q99952 460 aa12.87□□□□□ -0.35
RPAIN-204ENST00000405578 DENND2AQ9ULE3 1009 aa12.87□□□□□ -0.35
RPAIN-204ENST00000405578 A0A1B0GUL6 1792 aa12.86□□□□□ -0.35
RPAIN-204ENST00000405578 SMARCA5O60264 1052 aaPredicted RBP12.86□□□□□ -0.35
RPAIN-204ENST00000405578 PHKA1P46020 1223 aa12.86□□□□□ -0.35
RPAIN-204ENST00000405578 GTF2IP78347 998 aa12.86□□□□□ -0.35
RPAIN-204ENST00000405578 CENPQQ7L2Z9 268 aaPredicted RBP12.86□□□□□ -0.35
RPAIN-204ENST00000405578 WDR66Q8TBY9 1149 aa12.86□□□□□ -0.35
RPAIN-204ENST00000405578 DBNDD2Q9BQY9 259 aa12.86□□□□□ -0.35
RPAIN-204ENST00000405578 PPP4R2Q9NY27 417 aa12.86□□□□□ -0.35
RPAIN-204ENST00000405578 DBNLQ9UJU6 430 aaKnown RBP12.86□□□□□ -0.35
RPAIN-204ENST00000405578 ZBTB22O15209 634 aa12.85□□□□□ -0.35
RPAIN-204ENST00000405578 MMP14P50281 582 aa12.85□□□□□ -0.35
RPAIN-204ENST00000405578 CHAF1AQ13111 956 aaPredicted RBP12.85□□□□□ -0.35
RPAIN-204ENST00000405578 CHD1LQ86WJ1 897 aa12.85□□□□□ -0.35
RPAIN-204ENST00000405578 ZGPATQ8N5A5 531 aaKnown RBP12.85□□□□□ -0.35
RPAIN-204ENST00000405578 SH3TC2Q8TF17 1288 aa12.85□□□□□ -0.35
RPAIN-204ENST00000405578 DPF3Q92784 378 aa12.85□□□□□ -0.35
RPAIN-204ENST00000405578 ZNF512BQ96KM6 892 aaPredicted RBP12.85□□□□□ -0.35
RPAIN-204ENST00000405578 IQSEC3Q9UPP2 1182 aaPredicted RBP12.85□□□□□ -0.35
RPAIN-204ENST00000405578 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.85□□□□□ -0.35
RPAIN-204ENST00000405578 FAM205AQ6ZU69 1335 aa12.85□□□□□ -0.35
RPAIN-204ENST00000405578 A0A0C4DFX4 3053 aa12.84□□□□□ -0.35
RPAIN-204ENST00000405578 TESPA1A2RU30 521 aaPredicted RBP12.84□□□□□ -0.35
RPAIN-204ENST00000405578 ERC2O15083 957 aa12.84□□□□□ -0.35
RPAIN-204ENST00000405578 ARID4AP29374 1257 aaPredicted RBP12.84□□□□□ -0.35
RPAIN-204ENST00000405578 IREB2P48200 963 aaKnown RBP12.84□□□□□ -0.35
RPAIN-204ENST00000405578 FKBP1AP62942 108 aaKnown RBP12.84□□□□□ -0.35
RPAIN-204ENST00000405578 NUCB1Q02818 461 aa12.84□□□□□ -0.35
RPAIN-204ENST00000405578 ARHGEF6Q15052 776 aa12.84□□□□□ -0.35
RPAIN-204ENST00000405578 DLGAP5Q15398 846 aa12.84□□□□□ -0.35
RPAIN-204ENST00000405578 TAF1CQ15572 869 aaPredicted RBP12.84□□□□□ -0.35
RPAIN-204ENST00000405578 PPP2R3BQ9Y5P8 575 aa12.84□□□□□ -0.35
RPAIN-204ENST00000405578 ARAP2Q8WZ64 1704 aa12.84□□□□□ -0.35
RPAIN-204ENST00000405578 CLRN2A0PK11 232 aa12.83□□□□□ -0.36
RPAIN-204ENST00000405578 UNCXA6NJT0 531 aa12.83□□□□□ -0.36
RPAIN-204ENST00000405578 RASGRF1Q13972 1273 aa12.83□□□□□ -0.36
RPAIN-204ENST00000405578 SUPT20HL1Q3ZLR7 823 aa12.83□□□□□ -0.36
RPAIN-204ENST00000405578 MFSD14BQ5SR56 506 aa12.83□□□□□ -0.36
RPAIN-204ENST00000405578 NBPF12Q5TAG4 269 aaPredicted RBP12.83□□□□□ -0.36
RPAIN-204ENST00000405578 SPTY2D1Q68D10 685 aaPredicted RBP12.83□□□□□ -0.36
RPAIN-204ENST00000405578 ANKRD13AQ8IZ07 590 aa12.83□□□□□ -0.36
RPAIN-204ENST00000405578 SPATA5Q8NB90 893 aa12.83□□□□□ -0.36
RPAIN-204ENST00000405578 SHISA4Q96DD7 197 aa12.83□□□□□ -0.36
RPAIN-204ENST00000405578 LNPKQ9C0E8 428 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms