RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 ZC3H6P61129 1189 aaKnown RBP17.89■□□□□ 0.46
ATG4B-205ENST00000404914 MYL5Q02045 173 aa17.89■□□□□ 0.46
ATG4B-205ENST00000404914 PPP2R3AQ06190 1150 aa17.89■□□□□ 0.46
ATG4B-205ENST00000404914 SLC20A2Q08357 652 aa17.89■□□□□ 0.46
ATG4B-205ENST00000404914 RABL6Q3YEC7 729 aaPredicted RBP17.89■□□□□ 0.46
ATG4B-205ENST00000404914 LMBR1LQ6UX01 489 aa17.89■□□□□ 0.46
ATG4B-205ENST00000404914 RSRC2Q7L4I2 434 aaKnown RBP17.89■□□□□ 0.46
ATG4B-205ENST00000404914 LRP10Q7Z4F1 713 aa17.89■□□□□ 0.46
ATG4B-205ENST00000404914 DHX58Q96C10 678 aa17.89■□□□□ 0.46
ATG4B-205ENST00000404914 SLIT3O75094 1523 aa17.89■□□□□ 0.46
ATG4B-205ENST00000404914 SYKP43405 635 aa17.89■□□□□ 0.45
ATG4B-205ENST00000404914 ANTXR2P58335 489 aa17.89■□□□□ 0.45
ATG4B-205ENST00000404914 ANKRD13DQ6ZTN6 518 aa17.89■□□□□ 0.45
ATG4B-205ENST00000404914 ATG9AQ7Z3C6 839 aa17.89■□□□□ 0.45
ATG4B-205ENST00000404914 METTL16Q86W50 562 aaKnown RBP17.89■□□□□ 0.45
ATG4B-205ENST00000404914 MRFAP1Q9Y605 127 aa17.89■□□□□ 0.45
ATG4B-205ENST00000404914 AFDNP55196 1824 aaKnown RBP17.89■□□□□ 0.45
ATG4B-205ENST00000404914 A0A087WZG4 1122 aa17.89■□□□□ 0.45
ATG4B-205ENST00000404914 MTF1Q14872 753 aa17.89■□□□□ 0.45
ATG4B-205ENST00000404914 KARSQ15046 597 aaKnown RBP17.89■□□□□ 0.45
ATG4B-205ENST00000404914 AMOTQ4VCS5 1084 aa17.89■□□□□ 0.45
ATG4B-205ENST00000404914 ZNF790Q6PG37 636 aa17.89■□□□□ 0.45
ATG4B-205ENST00000404914 SYNE3Q6ZMZ3 975 aa17.89■□□□□ 0.45
ATG4B-205ENST00000404914 KIFC2Q96AC6 838 aa17.89■□□□□ 0.45
ATG4B-205ENST00000404914 TUBB4AP04350 444 aa17.88■□□□□ 0.45
ATG4B-205ENST00000404914 PDILTQ8N807 584 aa17.88■□□□□ 0.45
ATG4B-205ENST00000404914 SRRTQ9BXP5 876 aaKnown RBP17.88■□□□□ 0.45
ATG4B-205ENST00000404914 UBE2Q2LH0YL09 131 aa17.88■□□□□ 0.45
ATG4B-205ENST00000404914 TFRCP02786 760 aaKnown RBP17.88■□□□□ 0.45
ATG4B-205ENST00000404914 RXRAP19793 462 aa17.88■□□□□ 0.45
ATG4B-205ENST00000404914 ZNF496Q96IT1 587 aaPredicted RBP17.88■□□□□ 0.45
ATG4B-205ENST00000404914 AXIN2Q9Y2T1 843 aa17.88■□□□□ 0.45
ATG4B-205ENST00000404914 ABCA3Q99758 1704 aa17.87■□□□□ 0.45
ATG4B-205ENST00000404914 PRC1O43663 620 aa17.87■□□□□ 0.45
ATG4B-205ENST00000404914 CASQ1P31415 396 aa17.87■□□□□ 0.45
ATG4B-205ENST00000404914 SPECC1Q5M775 1068 aa17.87■□□□□ 0.45
ATG4B-205ENST00000404914 ZNF594Q96JF6 807 aaPredicted RBP17.87■□□□□ 0.45
ATG4B-205ENST00000404914 HPSEQ9Y251 543 aa17.87■□□□□ 0.45
ATG4B-205ENST00000404914 SLC39A14Q15043 492 aa17.87■□□□□ 0.45
ATG4B-205ENST00000404914 ZSCAN26Q16670 478 aa17.87■□□□□ 0.45
ATG4B-205ENST00000404914 LONRF3Q496Y0 759 aa17.87■□□□□ 0.45
ATG4B-205ENST00000404914 TC2NQ8N9U0 490 aa17.87■□□□□ 0.45
ATG4B-205ENST00000404914 MRPL44Q9H9J2 332 aaKnown RBP17.87■□□□□ 0.45
ATG4B-205ENST00000404914 RGPD5Q99666 1765 aa17.86■□□□□ 0.45
ATG4B-205ENST00000404914 CASP7P55210 303 aa17.86■□□□□ 0.45
ATG4B-205ENST00000404914 LRRC24Q50LG9 513 aa17.86■□□□□ 0.45
ATG4B-205ENST00000404914 TXLNBQ8N3L3 684 aa17.86■□□□□ 0.45
ATG4B-205ENST00000404914 ARHGAP6O43182 974 aa17.86■□□□□ 0.45
ATG4B-205ENST00000404914 CCP110O43303 1012 aa17.86■□□□□ 0.45
ATG4B-205ENST00000404914 TBX2Q13207 712 aaPredicted RBP17.86■□□□□ 0.45
ATG4B-205ENST00000404914 GPR161Q8N6U8 529 aaKnown RBP17.86■□□□□ 0.45
ATG4B-205ENST00000404914 ANKRD24Q8TF21 1146 aa17.86■□□□□ 0.45
ATG4B-205ENST00000404914 BAG1Q99933 345 aaPredicted RBP17.86■□□□□ 0.45
ATG4B-205ENST00000404914 PCDHA5Q9Y5H7 936 aa17.86■□□□□ 0.45
ATG4B-205ENST00000404914 RNF113AO15541 343 aaKnown RBP17.85■□□□□ 0.45
ATG4B-205ENST00000404914 ZNF827Q17R98 1081 aa17.85■□□□□ 0.45
ATG4B-205ENST00000404914 MUM1L1Q5H9M0 696 aa17.85■□□□□ 0.45
ATG4B-205ENST00000404914 BRAPQ7Z569 592 aa17.85■□□□□ 0.45
ATG4B-205ENST00000404914 FMR1Q06787 632 aaKnown RBP eCLIP17.85■□□□□ 0.45
ATG4B-205ENST00000404914 PDE4CQ08493 712 aa17.85■□□□□ 0.45
ATG4B-205ENST00000404914 PTPAQ15257 358 aa17.85■□□□□ 0.45
ATG4B-205ENST00000404914 MB21D2Q8IYB1 491 aaPredicted RBP17.85■□□□□ 0.45
ATG4B-205ENST00000404914 TRMT44Q8IYL2 757 aaKnown RBP17.85■□□□□ 0.45
ATG4B-205ENST00000404914 CCDC191Q8NCU4 936 aa17.85■□□□□ 0.45
ATG4B-205ENST00000404914 MPHOSPH8Q99549 860 aa17.85■□□□□ 0.45
ATG4B-205ENST00000404914 ARFGAP3Q9NP61 516 aa17.85■□□□□ 0.45
ATG4B-205ENST00000404914 ADAM21Q9UKJ8 722 aa17.85■□□□□ 0.45
ATG4B-205ENST00000404914 ZSCAN12O43309 604 aa17.85■□□□□ 0.45
ATG4B-205ENST00000404914 SUGCTQ9HAC7 445 aa17.85■□□□□ 0.45
ATG4B-205ENST00000404914 ATP8B1O43520 1251 aa17.84■□□□□ 0.45
ATG4B-205ENST00000404914 LMAN1P49257 510 aa17.84■□□□□ 0.45
ATG4B-205ENST00000404914 FOXO4P98177 505 aa17.84■□□□□ 0.45
ATG4B-205ENST00000404914 CHRNA2Q15822 529 aa17.84■□□□□ 0.45
ATG4B-205ENST00000404914 LONRF2Q1L5Z9 754 aa17.84■□□□□ 0.45
ATG4B-205ENST00000404914 IPO4Q8TEX9 1081 aaKnown RBP17.84■□□□□ 0.45
ATG4B-205ENST00000404914 MED15Q96RN5 788 aa17.84■□□□□ 0.45
ATG4B-205ENST00000404914 SENP2Q9HC62 589 aa17.84■□□□□ 0.45
ATG4B-205ENST00000404914 CPLX1O14810 134 aa17.84■□□□□ 0.45
ATG4B-205ENST00000404914 CBFA2T2O43439 604 aa17.84■□□□□ 0.45
ATG4B-205ENST00000404914 FGAP02671 866 aa17.84■□□□□ 0.45
ATG4B-205ENST00000404914 IFIT1P09914 478 aaKnown RBP17.84■□□□□ 0.45
ATG4B-205ENST00000404914 VPS37DQ86XT2 251 aa17.84■□□□□ 0.45
ATG4B-205ENST00000404914 C10orf67Q8IYJ2 551 aa17.84■□□□□ 0.45
ATG4B-205ENST00000404914 ARHGEF25Q86VW2 580 aa17.83■□□□□ 0.45
ATG4B-205ENST00000404914 PHKBQ93100 1093 aa17.83■□□□□ 0.45
ATG4B-205ENST00000404914 PUS3Q9BZE2 481 aaKnown RBP17.83■□□□□ 0.45
ATG4B-205ENST00000404914 C4AP0C0L4 1744 aa17.83■□□□□ 0.45
ATG4B-205ENST00000404914 C4BP0C0L5 1744 aa17.83■□□□□ 0.45
ATG4B-205ENST00000404914 N4BP1O75113 896 aaKnown RBP17.83■□□□□ 0.44
ATG4B-205ENST00000404914 GRIN1Q05586 938 aa17.83■□□□□ 0.44
ATG4B-205ENST00000404914 FCHSD1Q86WN1 690 aa17.83■□□□□ 0.44
ATG4B-205ENST00000404914 KCNH5Q8NCM2 988 aa17.83■□□□□ 0.44
ATG4B-205ENST00000404914 PRR29P0C7W0 189 aa17.82■□□□□ 0.44
ATG4B-205ENST00000404914 FKBP4Q02790 459 aaKnown RBP eCLIP17.82■□□□□ 0.44
ATG4B-205ENST00000404914 FOXR1Q6PIV2 292 aa17.82■□□□□ 0.44
ATG4B-205ENST00000404914 STK11IPQ8N1F8 1099 aa17.82■□□□□ 0.44
ATG4B-205ENST00000404914 MAP3K14Q99558 947 aa17.82■□□□□ 0.44
ATG4B-205ENST00000404914 PUF60Q9UHX1 559 aaKnown RBP17.82■□□□□ 0.44
ATG4B-205ENST00000404914 OVOS2A0A0G2JMS6 1433 aa17.82■□□□□ 0.44
ATG4B-205ENST00000404914 KDM6AO15550 1401 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms