RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 IGDCC4Q8TDY8 1250 aa14.42□□□□□ -0.1
CLIP4-203ENST00000401617 CNNM2Q9H8M5 875 aa14.42□□□□□ -0.1
CLIP4-203ENST00000401617 RBM27Q9P2N5 1060 aaKnown RBP14.42□□□□□ -0.1
CLIP4-203ENST00000401617 ANAPC4Q9UJX5 808 aa14.42□□□□□ -0.1
CLIP4-203ENST00000401617 KIF3AQ9Y496 699 aa14.42□□□□□ -0.1
CLIP4-203ENST00000401617 BAZ2AQ9UIF9 1905 aaKnown RBP14.42□□□□□ -0.1
CLIP4-203ENST00000401617 LRRC37AA6NMS7 1700 aa14.42□□□□□ -0.1
CLIP4-203ENST00000401617 KLF18A0A0U1RQI7 1052 aa14.41□□□□□ -0.1
CLIP4-203ENST00000401617 B4E1Z4 1266 aa14.41□□□□□ -0.1
CLIP4-203ENST00000401617 RESTQ13127 1097 aa14.41□□□□□ -0.1
CLIP4-203ENST00000401617 SGMS1Q86VZ5 419 aa14.41□□□□□ -0.1
CLIP4-203ENST00000401617 RPGRQ92834 1020 aaKnown RBP14.41□□□□□ -0.1
CLIP4-203ENST00000401617 DDX11Q96FC9 970 aa14.41□□□□□ -0.1
CLIP4-203ENST00000401617 MTA3Q9BTC8 594 aa14.41□□□□□ -0.1
CLIP4-203ENST00000401617 RGPD3A6NKT7 1758 aaPredicted RBP14.41□□□□□ -0.1
CLIP4-203ENST00000401617 RGPD4Q7Z3J3 1758 aa14.41□□□□□ -0.1
CLIP4-203ENST00000401617 DHX16O60231 1041 aaKnown RBP14.41□□□□□ -0.1
CLIP4-203ENST00000401617 FDPSP14324 419 aaKnown RBP14.41□□□□□ -0.1
CLIP4-203ENST00000401617 CTDSPL2Q05D32 466 aa14.41□□□□□ -0.1
CLIP4-203ENST00000401617 GIMAP6Q6P9H5 292 aa14.41□□□□□ -0.1
CLIP4-203ENST00000401617 FAM184AQ8NB25 1140 aa14.41□□□□□ -0.1
CLIP4-203ENST00000401617 TDRD7Q8NHU6 1098 aaKnown RBP14.41□□□□□ -0.1
CLIP4-203ENST00000401617 RBM17Q96I25 401 aaKnown RBP14.41□□□□□ -0.1
CLIP4-203ENST00000401617 BRIP1Q9BX63 1249 aa14.41□□□□□ -0.1
CLIP4-203ENST00000401617 KRT23Q9C075 422 aa14.41□□□□□ -0.1
CLIP4-203ENST00000401617 ZSCAN16Q9H4T2 348 aaPredicted RBP14.41□□□□□ -0.1
CLIP4-203ENST00000401617 ELP1O95163 1332 aa14.41□□□□□ -0.1
CLIP4-203ENST00000401617 BBOX1O75936 387 aa14.4□□□□□ -0.1
CLIP4-203ENST00000401617 LIFRP42702 1097 aa14.4□□□□□ -0.1
CLIP4-203ENST00000401617 TDO2P48775 406 aa14.4□□□□□ -0.1
CLIP4-203ENST00000401617 KRT85P78386 507 aa14.4□□□□□ -0.1
CLIP4-203ENST00000401617 ZNF827Q17R98 1081 aa14.4□□□□□ -0.1
CLIP4-203ENST00000401617 FERMT3Q86UX7 667 aa14.4□□□□□ -0.1
CLIP4-203ENST00000401617 RGS22Q8NE09 1264 aa14.4□□□□□ -0.1
CLIP4-203ENST00000401617 CRAMP1Q96RY5 1269 aa14.4□□□□□ -0.1
CLIP4-203ENST00000401617 ZSWIM5Q9P217 1185 aa14.4□□□□□ -0.1
CLIP4-203ENST00000401617 LTBP1Q14766 1721 aa14.4□□□□□ -0.1
CLIP4-203ENST00000401617 TNS1Q9HBL0 1735 aaKnown RBP14.4□□□□□ -0.1
CLIP4-203ENST00000401617 GOLGA8BA8MQT2 603 aa14.4□□□□□ -0.1
CLIP4-203ENST00000401617 FIBPO43427 364 aa14.4□□□□□ -0.1
CLIP4-203ENST00000401617 MECOMQ03112 1051 aa14.4□□□□□ -0.1
CLIP4-203ENST00000401617 MFSD6Q6ZSS7 791 aa14.4□□□□□ -0.1
CLIP4-203ENST00000401617 SLC51AQ86UW1 340 aa14.4□□□□□ -0.1
CLIP4-203ENST00000401617 LY9Q9HBG7 655 aa14.4□□□□□ -0.1
CLIP4-203ENST00000401617 INCENPQ9NQS7 918 aa14.4□□□□□ -0.1
CLIP4-203ENST00000401617 ANKIB1Q9P2G1 1089 aa14.4□□□□□ -0.1
CLIP4-203ENST00000401617 GPSM2P81274 684 aa14.39□□□□□ -0.11
CLIP4-203ENST00000401617 PPARAQ07869 468 aa14.39□□□□□ -0.11
CLIP4-203ENST00000401617 PODXL2Q9NZ53 605 aa14.39□□□□□ -0.11
CLIP4-203ENST00000401617 MYH2Q9UKX2 1941 aa14.39□□□□□ -0.11
CLIP4-203ENST00000401617 NID2Q14112 1375 aa14.39□□□□□ -0.11
CLIP4-203ENST00000401617 H3BQV1 296 aa14.39□□□□□ -0.11
CLIP4-203ENST00000401617 DYNLL1P63167 89 aaKnown RBP14.39□□□□□ -0.11
CLIP4-203ENST00000401617 IFFO2Q5TF58 517 aa14.39□□□□□ -0.11
CLIP4-203ENST00000401617 SPTY2D1Q68D10 685 aaPredicted RBP14.39□□□□□ -0.11
CLIP4-203ENST00000401617 APOA5Q6Q788 366 aa14.39□□□□□ -0.11
CLIP4-203ENST00000401617 SDR42E1Q8WUS8 393 aa14.39□□□□□ -0.11
CLIP4-203ENST00000401617 SYAP1Q96A49 352 aaPredicted RBP14.39□□□□□ -0.11
CLIP4-203ENST00000401617 RNF41Q9H4P4 317 aaPredicted RBP14.39□□□□□ -0.11
CLIP4-203ENST00000401617 NAP1L2Q9ULW6 460 aaPredicted RBP14.39□□□□□ -0.11
CLIP4-203ENST00000401617 KDM4AO75164 1064 aa14.38□□□□□ -0.11
CLIP4-203ENST00000401617 APBA3O96018 575 aa14.38□□□□□ -0.11
CLIP4-203ENST00000401617 FGRP09769 529 aa14.38□□□□□ -0.11
CLIP4-203ENST00000401617 ATP2B4P23634 1241 aa14.38□□□□□ -0.11
CLIP4-203ENST00000401617 PRDX5P30044 214 aa14.38□□□□□ -0.11
CLIP4-203ENST00000401617 FAM173BQ6P4H8 233 aa14.38□□□□□ -0.11
CLIP4-203ENST00000401617 TTC6Q86TZ1 520 aa14.38□□□□□ -0.11
CLIP4-203ENST00000401617 COL23A1Q86Y22 540 aaPredicted RBP14.38□□□□□ -0.11
CLIP4-203ENST00000401617 NLGN1Q8N2Q7 840 aa14.38□□□□□ -0.11
CLIP4-203ENST00000401617 WDR66Q8TBY9 1149 aa14.38□□□□□ -0.11
CLIP4-203ENST00000401617 SCAND2PQ9GZW5 306 aaPredicted RBP14.38□□□□□ -0.11
CLIP4-203ENST00000401617 LAMB1P07942 1786 aa14.38□□□□□ -0.11
CLIP4-203ENST00000401617 DUOX1Q9NRD9 1551 aa14.37□□□□□ -0.11
CLIP4-203ENST00000401617 LRSAM1Q6UWE0 723 aa14.37□□□□□ -0.11
CLIP4-203ENST00000401617 TMC4Q7Z404 712 aa14.37□□□□□ -0.11
CLIP4-203ENST00000401617 ZNF804AQ7Z570 1209 aa14.37□□□□□ -0.11
CLIP4-203ENST00000401617 KLHL34Q8N239 644 aa14.37□□□□□ -0.11
CLIP4-203ENST00000401617 FLAD1Q8NFF5 587 aa14.37□□□□□ -0.11
CLIP4-203ENST00000401617 SENP2Q9HC62 589 aa14.37□□□□□ -0.11
CLIP4-203ENST00000401617 RXRBP28702 533 aa14.37□□□□□ -0.11
CLIP4-203ENST00000401617 ADD1P35611 737 aaKnown RBP14.37□□□□□ -0.11
CLIP4-203ENST00000401617 CHAF1AQ13111 956 aaPredicted RBP14.37□□□□□ -0.11
CLIP4-203ENST00000401617 TMEM67Q5HYA8 995 aa14.37□□□□□ -0.11
CLIP4-203ENST00000401617 PCP11498 1178 aaKnown RBP14.36□□□□□ -0.11
CLIP4-203ENST00000401617 FAM217BQ9NTX9 383 aaPredicted RBP14.36□□□□□ -0.11
CLIP4-203ENST00000401617 DLEC1Q9Y238 1755 aa14.36□□□□□ -0.11
CLIP4-203ENST00000401617 IFIT3O14879 490 aaKnown RBP14.36□□□□□ -0.11
CLIP4-203ENST00000401617 IL1R1P14778 569 aa14.36□□□□□ -0.11
CLIP4-203ENST00000401617 ATL3Q6DD88 541 aa14.36□□□□□ -0.11
CLIP4-203ENST00000401617 LEO1Q8WVC0 666 aaPredicted RBP14.36□□□□□ -0.11
CLIP4-203ENST00000401617 PANK2Q9BZ23 570 aa14.36□□□□□ -0.11
CLIP4-203ENST00000401617 GGA1Q9UJY5 639 aa14.36□□□□□ -0.11
CLIP4-203ENST00000401617 ECM29Q5VYK3 1845 aa14.35□□□□□ -0.11
CLIP4-203ENST00000401617 SYCE3A1L190 88 aa14.35□□□□□ -0.11
CLIP4-203ENST00000401617 METAP2P50579 478 aaKnown RBP eCLIP14.35□□□□□ -0.11
CLIP4-203ENST00000401617 RCAN1P53805 252 aa14.35□□□□□ -0.11
CLIP4-203ENST00000401617 NTRK3Q16288 839 aa14.35□□□□□ -0.11
CLIP4-203ENST00000401617 CCDC183Q5T5S1 534 aa14.35□□□□□ -0.11
CLIP4-203ENST00000401617 CTR9Q6PD62 1173 aa14.35□□□□□ -0.11
CLIP4-203ENST00000401617 SP8Q8IXZ3 490 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms