RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 HELLSQ9NRZ9 838 aa9.12□□□□□ -0.95
USP16-204ENST00000399976 WWC3Q9ULE0 1092 aa9.12□□□□□ -0.95
USP16-204ENST00000399976 GTF3C3Q9Y5Q9 886 aa9.12□□□□□ -0.95
USP16-204ENST00000399976 ITGBL1O95965 494 aaPredicted RBP9.11□□□□□ -0.95
USP16-204ENST00000399976 BMP2KLQ5H9B9 411 aa9.11□□□□□ -0.95
USP16-204ENST00000399976 TTC22Q5TAA0 569 aa9.11□□□□□ -0.95
USP16-204ENST00000399976 NAA16Q6N069 864 aaPredicted RBP9.11□□□□□ -0.95
USP16-204ENST00000399976 ZNF384Q8TF68 577 aa9.11□□□□□ -0.95
USP16-204ENST00000399976 FAM151AQ8WW52 585 aa9.11□□□□□ -0.95
USP16-204ENST00000399976 EHD4Q9H223 541 aa9.11□□□□□ -0.95
USP16-204ENST00000399976 PIH1D3Q9NQM4 214 aaKnown RBP9.11□□□□□ -0.95
USP16-204ENST00000399976 TMOD2Q9NZR1 351 aa9.11□□□□□ -0.95
USP16-204ENST00000399976 PTPRFP10586 1907 aa9.11□□□□□ -0.95
USP16-204ENST00000399976 CNTNAP1P78357 1384 aa9.11□□□□□ -0.95
USP16-204ENST00000399976 SSC5DA1L4H1 1573 aa9.11□□□□□ -0.95
USP16-204ENST00000399976 PRDX5P30044 214 aa9.11□□□□□ -0.95
USP16-204ENST00000399976 MFAP1P55081 439 aaKnown RBP9.11□□□□□ -0.95
USP16-204ENST00000399976 RHBDL3P58872 404 aa9.11□□□□□ -0.95
USP16-204ENST00000399976 TRPM4Q8TD43 1214 aa9.11□□□□□ -0.95
USP16-204ENST00000399976 APPBP2Q92624 585 aa9.11□□□□□ -0.95
USP16-204ENST00000399976 DCPSQ96C86 337 aaKnown RBP9.11□□□□□ -0.95
USP16-204ENST00000399976 NOL10Q9BSC4 688 aaKnown RBP9.11□□□□□ -0.95
USP16-204ENST00000399976 DHX36Q9H2U1 1008 aaKnown RBP9.11□□□□□ -0.95
USP16-204ENST00000399976 ZNF70Q9UC06 446 aaPredicted RBP9.11□□□□□ -0.95
USP16-204ENST00000399976 ZBTB12Q9Y330 459 aaPredicted RBP9.11□□□□□ -0.95
USP16-204ENST00000399976 PDE6AP16499 860 aa9.1□□□□□ -0.95
USP16-204ENST00000399976 ATP8A2Q9NTI2 1148 aa9.1□□□□□ -0.95
USP16-204ENST00000399976 LRP2BPQ9P2M1 347 aa9.1□□□□□ -0.95
USP16-204ENST00000399976 RNF113AO15541 343 aaKnown RBP9.1□□□□□ -0.95
USP16-204ENST00000399976 SMARCA5O60264 1052 aaPredicted RBP9.1□□□□□ -0.95
USP16-204ENST00000399976 ZMYM1Q5SVZ6 1142 aa9.1□□□□□ -0.95
USP16-204ENST00000399976 KIAA0825Q8IV33 1275 aa9.1□□□□□ -0.95
USP16-204ENST00000399976 REM2Q8IYK8 340 aaPredicted RBP9.1□□□□□ -0.95
USP16-204ENST00000399976 CCDC136Q96JN2 1154 aa9.1□□□□□ -0.95
USP16-204ENST00000399976 RIOK1Q9BRS2 568 aaKnown RBP9.1□□□□□ -0.95
USP16-204ENST00000399976 PDE4AP27815 886 aa9.09□□□□□ -0.95
USP16-204ENST00000399976 CHAF1AQ13111 956 aaPredicted RBP9.09□□□□□ -0.95
USP16-204ENST00000399976 ALX1Q15699 326 aa9.09□□□□□ -0.95
USP16-204ENST00000399976 MKRN1Q9UHC7 482 aaKnown RBP9.09□□□□□ -0.95
USP16-204ENST00000399976 SBK1Q52WX2 424 aa9.09□□□□□ -0.95
USP16-204ENST00000399976 BAZ2AQ9UIF9 1905 aaKnown RBP9.09□□□□□ -0.95
USP16-204ENST00000399976 PCP11498 1178 aaKnown RBP9.09□□□□□ -0.95
USP16-204ENST00000399976 GRIK5Q16478 980 aa9.09□□□□□ -0.95
USP16-204ENST00000399976 SUPT20HL1Q3ZLR7 823 aa9.09□□□□□ -0.95
USP16-204ENST00000399976 NOL9Q5SY16 702 aaKnown RBP9.09□□□□□ -0.95
USP16-204ENST00000399976 CDC42EP5Q6NZY7 148 aa9.09□□□□□ -0.95
USP16-204ENST00000399976 ZNF112Q9UJU3 913 aa9.09□□□□□ -0.95
USP16-204ENST00000399976 SULF1Q8IWU6 871 aa9.08□□□□□ -0.96
USP16-204ENST00000399976 IL27Q8NEV9 243 aa9.08□□□□□ -0.96
USP16-204ENST00000399976 PRMT6Q96LA8 375 aaPredicted RBP9.08□□□□□ -0.96
USP16-204ENST00000399976 TEPSINQ96N21 525 aa9.08□□□□□ -0.96
USP16-204ENST00000399976 LNPKQ9C0E8 428 aa9.08□□□□□ -0.96
USP16-204ENST00000399976 CREBZFQ9NS37 354 aa9.08□□□□□ -0.96
USP16-204ENST00000399976 RAI14Q9P0K7 980 aa9.08□□□□□ -0.96
USP16-204ENST00000399976 HERC5Q9UII4 1024 aaKnown RBP9.08□□□□□ -0.96
USP16-204ENST00000399976 GOLIM4O00461 696 aa9.08□□□□□ -0.96
USP16-204ENST00000399976 BTDP43251 543 aa9.08□□□□□ -0.96
USP16-204ENST00000399976 GGA3Q9NZ52 723 aa9.08□□□□□ -0.96
USP16-204ENST00000399976 SYNPO2Q9UMS6 1093 aa9.08□□□□□ -0.96
USP16-204ENST00000399976 WDHD1O75717 1129 aaPredicted RBP9.07□□□□□ -0.96
USP16-204ENST00000399976 SAMD7Q7Z3H4 446 aa9.07□□□□□ -0.96
USP16-204ENST00000399976 CRNKL1Q9BZJ0 848 aaKnown RBP9.07□□□□□ -0.96
USP16-204ENST00000399976 BOLA2Q9H3K6 86 aa9.07□□□□□ -0.96
USP16-204ENST00000399976 PLIN4Q96Q06 1357 aa9.07□□□□□ -0.96
USP16-204ENST00000399976 ZNF532Q9HCE3 1301 aa9.07□□□□□ -0.96
USP16-204ENST00000399976 NF2P35240 595 aa9.07□□□□□ -0.96
USP16-204ENST00000399976 TBC1D10BQ4KMP7 808 aaPredicted RBP9.07□□□□□ -0.96
USP16-204ENST00000399976 SLC9C2Q5TAH2 1124 aa9.07□□□□□ -0.96
USP16-204ENST00000399976 DCAF15Q66K64 600 aa9.07□□□□□ -0.96
USP16-204ENST00000399976 MXD3Q9BW11 206 aa9.07□□□□□ -0.96
USP16-204ENST00000399976 ABCF2Q9UG63 623 aa9.07□□□□□ -0.96
USP16-204ENST00000399976 PARP14Q460N5 1801 aa9.07□□□□□ -0.96
USP16-204ENST00000399976 MAGEB6P1A0A0J9YX57 407 aa9.06□□□□□ -0.96
USP16-204ENST00000399976 CYP7A1P22680 504 aa9.06□□□□□ -0.96
USP16-204ENST00000399976 APLP1P51693 650 aa9.06□□□□□ -0.96
USP16-204ENST00000399976 NBPF9Q3BBW0 867 aa9.06□□□□□ -0.96
USP16-204ENST00000399976 ANGEL2Q5VTE6 544 aaKnown RBP9.06□□□□□ -0.96
USP16-204ENST00000399976 PI16Q6UXB8 463 aa9.06□□□□□ -0.96
USP16-204ENST00000399976 RUFY2Q8WXA3 655 aa9.06□□□□□ -0.96
USP16-204ENST00000399976 FBXW7Q969H0 707 aa9.06□□□□□ -0.96
USP16-204ENST00000399976 OSBPL5Q9H0X9 879 aaPredicted RBP9.06□□□□□ -0.96
USP16-204ENST00000399976 ANTXR1Q9H6X2 564 aa9.06□□□□□ -0.96
USP16-204ENST00000399976 FAM198AQ9UFP1 575 aa9.06□□□□□ -0.96
USP16-204ENST00000399976 TLL2Q9Y6L7 1015 aa9.06□□□□□ -0.96
USP16-204ENST00000399976 A0A0G2JMZ2 1700 aa9.06□□□□□ -0.96
USP16-204ENST00000399976 RASSF10A6NK89 507 aa9.06□□□□□ -0.96
USP16-204ENST00000399976 FOXP4Q8IVH2 680 aaPredicted RBP9.06□□□□□ -0.96
USP16-204ENST00000399976 MAGEB6Q8N7X4 407 aa9.06□□□□□ -0.96
USP16-204ENST00000399976 CDCA5Q96FF9 252 aa9.06□□□□□ -0.96
USP16-204ENST00000399976 ARPP21Q9UBL0 812 aaPredicted RBP9.06□□□□□ -0.96
USP16-204ENST00000399976 ANAPC4Q9UJX5 808 aa9.06□□□□□ -0.96
USP16-204ENST00000399976 IQSEC3Q9UPP2 1182 aaPredicted RBP9.06□□□□□ -0.96
USP16-204ENST00000399976 EGFRP00533 1210 aa9.06□□□□□ -0.96
USP16-204ENST00000399976 LDLRAD1Q5T700 205 aa9.06□□□□□ -0.96
USP16-204ENST00000399976 KRT26Q7Z3Y9 468 aa9.06□□□□□ -0.96
USP16-204ENST00000399976 OTUD7AQ8TE49 926 aaPredicted RBP9.06□□□□□ -0.96
USP16-204ENST00000399976 DNAJC2Q99543 621 aaKnown RBP9.06□□□□□ -0.96
USP16-204ENST00000399976 ZCCHC17Q9NP64 241 aaKnown RBP9.06□□□□□ -0.96
USP16-204ENST00000399976 USP40Q9NVE5 1235 aa9.06□□□□□ -0.96
USP16-204ENST00000399976 SWAP70Q9UH65 585 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms