RNA–Protein interactions for RNA: ENST00000399756.8

TRPV1-202, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPV1, Length 4,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-202ENST00000399756 JAKMIP3Q5VZ66 844 aa11.48□□□□□ -0.57
TRPV1-202ENST00000399756 KRT222Q8N1A0 295 aa11.48□□□□□ -0.57
TRPV1-202ENST00000399756 SDR42E1Q8WUS8 393 aa11.48□□□□□ -0.57
TRPV1-202ENST00000399756 ZNF274Q96GC6 653 aaPredicted RBP11.48□□□□□ -0.57
TRPV1-202ENST00000399756 INCENPQ9NQS7 918 aa11.48□□□□□ -0.57
TRPV1-202ENST00000399756 NFE2L3Q9Y4A8 694 aa11.48□□□□□ -0.57
TRPV1-202ENST00000399756 OVOS2A0A0J9YW53 1432 aa11.48□□□□□ -0.57
TRPV1-202ENST00000399756 OVOS2Q6IE36 1432 aa11.48□□□□□ -0.57
TRPV1-202ENST00000399756 PDE6AP16499 860 aa11.48□□□□□ -0.57
TRPV1-202ENST00000399756 RESTQ13127 1097 aa11.48□□□□□ -0.57
TRPV1-202ENST00000399756 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.48□□□□□ -0.57
TRPV1-202ENST00000399756 MCM9Q9NXL9 1143 aa11.48□□□□□ -0.57
TRPV1-202ENST00000399756 VPS54Q9P1Q0 977 aa11.48□□□□□ -0.57
TRPV1-202ENST00000399756 USP31Q70CQ4 1352 aa11.47□□□□□ -0.57
TRPV1-202ENST00000399756 BCAMP50895 628 aa11.47□□□□□ -0.57
TRPV1-202ENST00000399756 TERF1P54274 439 aa11.47□□□□□ -0.57
TRPV1-202ENST00000399756 PUM3Q15397 648 aaKnown RBP11.47□□□□□ -0.57
TRPV1-202ENST00000399756 HEATR3Q7Z4Q2 680 aa11.47□□□□□ -0.57
TRPV1-202ENST00000399756 RPAP1Q9BWH6 1393 aaPredicted RBP11.47□□□□□ -0.57
TRPV1-202ENST00000399756 ERLIN1O75477 346 aa11.47□□□□□ -0.57
TRPV1-202ENST00000399756 MTIF2P46199 727 aaKnown RBP11.47□□□□□ -0.57
TRPV1-202ENST00000399756 CCDC181Q5TID7 509 aa11.47□□□□□ -0.57
TRPV1-202ENST00000399756 ATL3Q6DD88 541 aa11.47□□□□□ -0.57
TRPV1-202ENST00000399756 PDE8AO60658 829 aa11.47□□□□□ -0.57
TRPV1-202ENST00000399756 ERCC3P19447 782 aa11.47□□□□□ -0.57
TRPV1-202ENST00000399756 MATR3P43243 847 aaKnown RBP eCLIP11.47□□□□□ -0.57
TRPV1-202ENST00000399756 PDE4BQ07343 736 aa11.47□□□□□ -0.57
TRPV1-202ENST00000399756 NAA30Q147X3 362 aaPredicted RBP11.47□□□□□ -0.57
TRPV1-202ENST00000399756 LRRC8AQ8IWT6 810 aa11.47□□□□□ -0.57
TRPV1-202ENST00000399756 TMTC2Q8N394 836 aa11.47□□□□□ -0.57
TRPV1-202ENST00000399756 SPATA5Q8NB90 893 aa11.47□□□□□ -0.57
TRPV1-202ENST00000399756 NGLY1Q96IV0 654 aa11.47□□□□□ -0.57
TRPV1-202ENST00000399756 TRIM47Q96LD4 638 aa11.47□□□□□ -0.57
TRPV1-202ENST00000399756 DRC1Q96MC2 740 aa11.47□□□□□ -0.57
TRPV1-202ENST00000399756 CEP89Q96ST8 783 aa11.47□□□□□ -0.57
TRPV1-202ENST00000399756 CENPHQ9H3R5 247 aa11.47□□□□□ -0.57
TRPV1-202ENST00000399756 TFCP2L1Q9NZI6 479 aa11.47□□□□□ -0.57
TRPV1-202ENST00000399756 ZNF219Q9P2Y4 722 aaPredicted RBP11.47□□□□□ -0.57
TRPV1-202ENST00000399756 A0A0G2JLW4 131 aa11.46□□□□□ -0.57
TRPV1-202ENST00000399756 F8W031 263 aaPredicted RBP11.46□□□□□ -0.57
TRPV1-202ENST00000399756 C6orf229H3BNL8 230 aa11.46□□□□□ -0.57
TRPV1-202ENST00000399756 COBLO75128 1261 aa11.46□□□□□ -0.57
TRPV1-202ENST00000399756 TRMT1LQ7Z2T5 733 aaKnown RBP11.46□□□□□ -0.57
TRPV1-202ENST00000399756 CARD6Q9BX69 1037 aa11.46□□□□□ -0.57
TRPV1-202ENST00000399756 ADKP55263 362 aaKnown RBP11.46□□□□□ -0.57
TRPV1-202ENST00000399756 BMS1Q14692 1282 aaKnown RBP11.46□□□□□ -0.57
TRPV1-202ENST00000399756 LONRF3Q496Y0 759 aa11.46□□□□□ -0.57
TRPV1-202ENST00000399756 CCDC178Q5BJE1 867 aa11.46□□□□□ -0.57
TRPV1-202ENST00000399756 SEC63Q9UGP8 760 aaKnown RBP11.46□□□□□ -0.57
TRPV1-202ENST00000399756 TMEM94Q12767 1356 aa11.46□□□□□ -0.57
TRPV1-202ENST00000399756 PPLO60437 1756 aa11.46□□□□□ -0.57
TRPV1-202ENST00000399756 KCNQ4P56696 695 aa11.46□□□□□ -0.58
TRPV1-202ENST00000399756 NLRP12P59046 1061 aa11.46□□□□□ -0.58
TRPV1-202ENST00000399756 KANK3Q6NY19 840 aa11.46□□□□□ -0.58
TRPV1-202ENST00000399756 LEKR1Q6ZMV7 388 aa11.46□□□□□ -0.58
TRPV1-202ENST00000399756 TMEM87AQ8NBN3 555 aa11.46□□□□□ -0.58
TRPV1-202ENST00000399756 EEF2KMTQ96G04 330 aa11.46□□□□□ -0.58
TRPV1-202ENST00000399756 TMEM87BQ96K49 555 aa11.46□□□□□ -0.58
TRPV1-202ENST00000399756 BAG1Q99933 345 aaPredicted RBP11.46□□□□□ -0.58
TRPV1-202ENST00000399756 CRNKL1Q9BZJ0 848 aaKnown RBP11.46□□□□□ -0.58
TRPV1-202ENST00000399756 VPS16Q9H269 839 aa11.46□□□□□ -0.58
TRPV1-202ENST00000399756 WWC3Q9ULE0 1092 aa11.46□□□□□ -0.58
TRPV1-202ENST00000399756 ZBTB1Q9Y2K1 713 aa11.46□□□□□ -0.58
TRPV1-202ENST00000399756 CARMIL3Q8ND23 1372 aa11.46□□□□□ -0.58
TRPV1-202ENST00000399756 MROH1Q8NDA8 1641 aa11.46□□□□□ -0.58
TRPV1-202ENST00000399756 FRMPD1Q5SYB0 1578 aa11.46□□□□□ -0.58
TRPV1-202ENST00000399756 STAT6P42226 847 aa11.45□□□□□ -0.58
TRPV1-202ENST00000399756 STOX1Q6ZVD7 989 aa11.45□□□□□ -0.58
TRPV1-202ENST00000399756 UIMC1Q96RL1 719 aa11.45□□□□□ -0.58
TRPV1-202ENST00000399756 SERTAD1Q9UHV2 236 aa11.45□□□□□ -0.58
TRPV1-202ENST00000399756 PRKAB2O43741 272 aa11.45□□□□□ -0.58
TRPV1-202ENST00000399756 YEATS4O95619 227 aa11.45□□□□□ -0.58
TRPV1-202ENST00000399756 ERCC6LQ2NKX8 1250 aa11.45□□□□□ -0.58
TRPV1-202ENST00000399756 AK7Q96M32 723 aa11.45□□□□□ -0.58
TRPV1-202ENST00000399756 DESI2Q9BSY9 194 aa11.45□□□□□ -0.58
TRPV1-202ENST00000399756 FANCLQ9NW38 375 aa11.45□□□□□ -0.58
TRPV1-202ENST00000399756 RCOR1Q9UKL0 485 aa11.45□□□□□ -0.58
TRPV1-202ENST00000399756 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.45□□□□□ -0.58
TRPV1-202ENST00000399756 PHACTR2O75167 634 aa11.45□□□□□ -0.58
TRPV1-202ENST00000399756 GYG1P46976 350 aa11.45□□□□□ -0.58
TRPV1-202ENST00000399756 CTSWP56202 376 aa11.45□□□□□ -0.58
TRPV1-202ENST00000399756 ZNF397Q8NF99 534 aaPredicted RBP11.45□□□□□ -0.58
TRPV1-202ENST00000399756 TDRD7Q8NHU6 1098 aaKnown RBP11.45□□□□□ -0.58
TRPV1-202ENST00000399756 LPIN2Q92539 896 aa11.45□□□□□ -0.58
TRPV1-202ENST00000399756 KIF5BP33176 963 aa11.45□□□□□ -0.58
TRPV1-202ENST00000399756 CCDC96Q2M329 555 aa11.45□□□□□ -0.58
TRPV1-202ENST00000399756 FAM47AQ5JRC9 791 aa11.45□□□□□ -0.58
TRPV1-202ENST00000399756 PIK3AP1Q6ZUJ8 805 aa11.45□□□□□ -0.58
TRPV1-202ENST00000399756 IFNL3Q8IZI9 196 aa11.45□□□□□ -0.58
TRPV1-202ENST00000399756 CCDC43Q96MW1 224 aaKnown RBP11.45□□□□□ -0.58
TRPV1-202ENST00000399756 SEC31BQ9NQW1 1179 aa11.45□□□□□ -0.58
TRPV1-202ENST00000399756 TCEAL9Q9UHQ7 104 aa11.45□□□□□ -0.58
TRPV1-202ENST00000399756 CLTCQ00610 1675 aaKnown RBP11.44□□□□□ -0.58
TRPV1-202ENST00000399756 RHOXF2BP0C7M4 288 aa11.44□□□□□ -0.58
TRPV1-202ENST00000399756 TRIM21P19474 475 aaKnown RBP11.44□□□□□ -0.58
TRPV1-202ENST00000399756 KRT2P35908 639 aa11.44□□□□□ -0.58
TRPV1-202ENST00000399756 TDRD12Q587J7 1177 aaKnown RBP11.44□□□□□ -0.58
TRPV1-202ENST00000399756 ZNF569Q5MCW4 686 aa11.44□□□□□ -0.58
TRPV1-202ENST00000399756 NLRP3Q96P20 1036 aa11.44□□□□□ -0.58
TRPV1-202ENST00000399756 RHOXF2Q9BQY4 288 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms