RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 HELQQ8TDG4 1101 aa7.37□□□□□ -1.23
TRAPPC13-202ENST00000399438 PXYLP1Q8TE99 480 aa7.37□□□□□ -1.23
TRAPPC13-202ENST00000399438 CCDC47Q96A33 483 aaKnown RBP7.37□□□□□ -1.23
TRAPPC13-202ENST00000399438 PPIP5K1Q6PFW1 1433 aa7.36□□□□□ -1.23
TRAPPC13-202ENST00000399438 hCG_1984214I3L0E3 225 aa7.36□□□□□ -1.23
TRAPPC13-202ENST00000399438 GJA5P36382 358 aa7.36□□□□□ -1.23
TRAPPC13-202ENST00000399438 TAF11Q15544 211 aa7.36□□□□□ -1.23
TRAPPC13-202ENST00000399438 LARP1Q6PKG0 1096 aaKnown RBP7.36□□□□□ -1.23
TRAPPC13-202ENST00000399438 ANP32BQ92688 251 aaKnown RBP7.36□□□□□ -1.23
TRAPPC13-202ENST00000399438 TMEM87BQ96K49 555 aa7.36□□□□□ -1.23
TRAPPC13-202ENST00000399438 CDV3Q9UKY7 258 aaKnown RBP7.36□□□□□ -1.23
TRAPPC13-202ENST00000399438 IQSEC2Q5JU85 1478 aa7.36□□□□□ -1.23
TRAPPC13-202ENST00000399438 SHPRHQ149N8 1683 aa7.36□□□□□ -1.23
TRAPPC13-202ENST00000399438 PIP5K1CO60331 668 aa7.36□□□□□ -1.23
TRAPPC13-202ENST00000399438 LMNB1P20700 586 aa7.36□□□□□ -1.23
TRAPPC13-202ENST00000399438 TWISTNBQ3B726 338 aaPredicted RBP7.36□□□□□ -1.23
TRAPPC13-202ENST00000399438 CAPN12Q6ZSI9 719 aa7.36□□□□□ -1.23
TRAPPC13-202ENST00000399438 LMNTD2Q8IXW0 634 aa7.36□□□□□ -1.23
TRAPPC13-202ENST00000399438 CD248Q9HCU0 757 aa7.36□□□□□ -1.23
TRAPPC13-202ENST00000399438 CYLDQ9NQC7 956 aa7.36□□□□□ -1.23
TRAPPC13-202ENST00000399438 DAAM1Q9Y4D1 1078 aa7.36□□□□□ -1.23
TRAPPC13-202ENST00000399438 IGHA2P01877 340 aa7.35□□□□□ -1.23
TRAPPC13-202ENST00000399438 SKIP12755 728 aa7.35□□□□□ -1.23
TRAPPC13-202ENST00000399438 FOXK1P85037 733 aa7.35□□□□□ -1.23
TRAPPC13-202ENST00000399438 HYIQ5T013 277 aa7.35□□□□□ -1.23
TRAPPC13-202ENST00000399438 NELL2Q99435 816 aa7.35□□□□□ -1.23
TRAPPC13-202ENST00000399438 XIRP1Q702N8 1843 aaKnown RBP7.35□□□□□ -1.23
TRAPPC13-202ENST00000399438 KLF4O43474 513 aa7.35□□□□□ -1.23
TRAPPC13-202ENST00000399438 HMMRO75330 724 aa7.35□□□□□ -1.23
TRAPPC13-202ENST00000399438 IL13P35225 146 aa7.35□□□□□ -1.23
TRAPPC13-202ENST00000399438 ST13P50502 369 aaKnown RBP7.35□□□□□ -1.23
TRAPPC13-202ENST00000399438 MAP3K9P80192 1104 aa7.35□□□□□ -1.23
TRAPPC13-202ENST00000399438 TTC30AQ86WT1 665 aa7.35□□□□□ -1.23
TRAPPC13-202ENST00000399438 NDUFAF2Q8N183 169 aa7.35□□□□□ -1.23
TRAPPC13-202ENST00000399438 TRMT2BQ96GJ1 504 aaKnown RBP7.35□□□□□ -1.23
TRAPPC13-202ENST00000399438 CDHR1Q96JP9 859 aa7.35□□□□□ -1.23
TRAPPC13-202ENST00000399438 PRIMPOLQ96LW4 560 aa7.35□□□□□ -1.23
TRAPPC13-202ENST00000399438 TMEM260Q9NX78 707 aa7.35□□□□□ -1.23
TRAPPC13-202ENST00000399438 SPG7Q9UQ90 795 aa7.35□□□□□ -1.23
TRAPPC13-202ENST00000399438 CDC42BPGQ6DT37 1551 aa7.35□□□□□ -1.23
TRAPPC13-202ENST00000399438 NCOA3Q9Y6Q9 1424 aa7.35□□□□□ -1.23
TRAPPC13-202ENST00000399438 ACEP12821 1306 aa7.35□□□□□ -1.23
TRAPPC13-202ENST00000399438 VAMP4O75379 141 aa7.35□□□□□ -1.23
TRAPPC13-202ENST00000399438 RAB27AP51159 221 aa7.35□□□□□ -1.23
TRAPPC13-202ENST00000399438 EIF4A2Q14240 407 aaKnown RBP7.35□□□□□ -1.23
TRAPPC13-202ENST00000399438 RC3H1Q5TC82 1133 aaKnown RBP7.35□□□□□ -1.23
TRAPPC13-202ENST00000399438 PRKD2Q9BZL6 878 aa7.35□□□□□ -1.23
TRAPPC13-202ENST00000399438 UPF2Q9HAU5 1272 aaKnown RBP7.35□□□□□ -1.23
TRAPPC13-202ENST00000399438 ORC4O43929 436 aa7.34□□□□□ -1.23
TRAPPC13-202ENST00000399438 MAPK8P45983 427 aa7.34□□□□□ -1.23
TRAPPC13-202ENST00000399438 SQSTM1Q13501 440 aa7.34□□□□□ -1.23
TRAPPC13-202ENST00000399438 PDXDC2PQ6P474 469 aa7.34□□□□□ -1.23
TRAPPC13-202ENST00000399438 FMN2Q9NZ56 1722 aa7.34□□□□□ -1.23
TRAPPC13-202ENST00000399438 ADGRL3Q9HAR2 1447 aa7.34□□□□□ -1.23
TRAPPC13-202ENST00000399438 LRRC7Q96NW7 1537 aa7.34□□□□□ -1.23
TRAPPC13-202ENST00000399438 TCEA3O75764 348 aa7.34□□□□□ -1.23
TRAPPC13-202ENST00000399438 DKK1O94907 266 aa7.34□□□□□ -1.23
TRAPPC13-202ENST00000399438 EPB42P16452 691 aa7.34□□□□□ -1.23
TRAPPC13-202ENST00000399438 SEPT2Q15019 361 aa7.34□□□□□ -1.23
TRAPPC13-202ENST00000399438 SIRT2Q8IXJ6 389 aa7.34□□□□□ -1.23
TRAPPC13-202ENST00000399438 SKA1Q96BD8 255 aa7.34□□□□□ -1.23
TRAPPC13-202ENST00000399438 FEZ1Q99689 392 aa7.34□□□□□ -1.23
TRAPPC13-202ENST00000399438 C22orf23Q9BZE7 217 aa7.34□□□□□ -1.23
TRAPPC13-202ENST00000399438 ZBTB40Q9NUA8 1239 aa7.34□□□□□ -1.23
TRAPPC13-202ENST00000399438 C9orf78Q9NZ63 289 aaPredicted RBP7.34□□□□□ -1.23
TRAPPC13-202ENST00000399438 DDX19BQ9UMR2 479 aa7.34□□□□□ -1.23
TRAPPC13-202ENST00000399438 TOPAZ1Q8N9V7 1692 aa7.34□□□□□ -1.23
TRAPPC13-202ENST00000399438 LTBP4Q8N2S1 1624 aa7.34□□□□□ -1.24
TRAPPC13-202ENST00000399438 ZNF335Q9H4Z2 1342 aaPredicted RBP7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 PTPN12Q05209 780 aaKnown RBP7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 PAK2Q13177 524 aa7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 G2E3Q7L622 706 aa7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 HOMER1Q86YM7 354 aa7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 SLF2Q8IX21 1173 aa7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 PPHLN1Q8NEY8 458 aaKnown RBP7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 RIC8AQ9NPQ8 531 aa7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 IP6K2Q9UHH9 426 aa7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 FBXO2Q9UK22 296 aaPredicted RBP7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 USP32Q8NFA0 1604 aa7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 CD2BP2O95400 341 aaKnown RBP7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 NAT2P11245 290 aa7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 HOXC13P31276 330 aa7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 SARSP49591 514 aaKnown RBP7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 TBC1D20Q96BZ9 403 aa7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 CHAMP1Q96JM3 812 aa7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 GPR101Q96P66 508 aaPredicted RBP7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 NEUROD4Q9HD90 331 aa7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 GTF2A1LQ9UNN4 478 aa7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 FIBPO43427 364 aa7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 ANXA1P04083 346 aa7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 EHHADHQ08426 723 aa7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 NCOA4Q13772 614 aa7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 RAB33AQ14088 237 aa7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 DDX42Q86XP3 938 aaKnown RBP eCLIP7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 SMAP1Q8IYB5 467 aaPredicted RBP7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 CPXCR1Q8N123 301 aa7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 ZNF594Q96JF6 807 aaPredicted RBP7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 PDGFDQ9GZP0 370 aaPredicted RBP7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 ZIM2Q9NZV7 527 aa7.33□□□□□ -1.24
TRAPPC13-202ENST00000399438 IPPQ9Y573 584 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms