RNA–Protein interactions for RNA: ENST00000399132.5

COL25A1-203, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL25A1, Length 2,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-203ENST00000399132 PLCB2Q00722 1185 aa17.62■□□□□ 0.41
COL25A1-203ENST00000399132 RESTQ13127 1097 aa17.62■□□□□ 0.41
COL25A1-203ENST00000399132 ANKIB1Q9P2G1 1089 aa17.62■□□□□ 0.41
COL25A1-203ENST00000399132 ZHX1Q9UKY1 873 aaPredicted RBP17.62■□□□□ 0.41
COL25A1-203ENST00000399132 MYH7P12883 1935 aa17.61■□□□□ 0.41
COL25A1-203ENST00000399132 CMTR1Q8N1G2 835 aaKnown RBP17.61■□□□□ 0.41
COL25A1-203ENST00000399132 CHMP4CQ96CF2 233 aa17.61■□□□□ 0.41
COL25A1-203ENST00000399132 ZNF274Q96GC6 653 aaPredicted RBP17.61■□□□□ 0.41
COL25A1-203ENST00000399132 NYXQ9GZU5 481 aa17.61■□□□□ 0.41
COL25A1-203ENST00000399132 PRDM1O75626 825 aa17.61■□□□□ 0.41
COL25A1-203ENST00000399132 CCDC183Q5T5S1 534 aa17.61■□□□□ 0.41
COL25A1-203ENST00000399132 RC3H1Q5TC82 1133 aaKnown RBP17.61■□□□□ 0.41
COL25A1-203ENST00000399132 CKAP2LQ8IYA6 745 aa17.61■□□□□ 0.41
COL25A1-203ENST00000399132 BICD2Q8TD16 824 aa17.61■□□□□ 0.41
COL25A1-203ENST00000399132 LEO1Q8WVC0 666 aaPredicted RBP17.61■□□□□ 0.41
COL25A1-203ENST00000399132 ZSWIM5Q9P217 1185 aa17.61■□□□□ 0.41
COL25A1-203ENST00000399132 GNL3LQ9NVN8 582 aaKnown RBP17.6■□□□□ 0.41
COL25A1-203ENST00000399132 ORC3Q9UBD5 711 aaPredicted RBP17.6■□□□□ 0.41
COL25A1-203ENST00000399132 TRPC5Q9UL62 973 aaPredicted RBP17.6■□□□□ 0.41
COL25A1-203ENST00000399132 COL1A1P02452 1464 aaPredicted RBP17.6■□□□□ 0.41
COL25A1-203ENST00000399132 LRP5O75197 1615 aa17.6■□□□□ 0.41
COL25A1-203ENST00000399132 CARMIL3Q8ND23 1372 aa17.6■□□□□ 0.41
COL25A1-203ENST00000399132 TMEM67Q5HYA8 995 aa17.6■□□□□ 0.41
COL25A1-203ENST00000399132 UTRNP46939 3433 aa17.59■□□□□ 0.41
COL25A1-203ENST00000399132 IFIT3O14879 490 aaKnown RBP17.59■□□□□ 0.41
COL25A1-203ENST00000399132 ANGEL1Q9UNK9 670 aaKnown RBP17.59■□□□□ 0.41
COL25A1-203ENST00000399132 PRDX5P30044 214 aa17.59■□□□□ 0.41
COL25A1-203ENST00000399132 CNBD1Q8NA66 436 aa17.59■□□□□ 0.41
COL25A1-203ENST00000399132 DACT1Q9NYF0 836 aa17.59■□□□□ 0.41
COL25A1-203ENST00000399132 RTL9Q8NET4 1388 aa17.58■□□□□ 0.41
COL25A1-203ENST00000399132 MAGEB6P1A0A0J9YX57 407 aa17.58■□□□□ 0.41
COL25A1-203ENST00000399132 CDC27P30260 824 aa17.58■□□□□ 0.41
COL25A1-203ENST00000399132 METAP2P50579 478 aaKnown RBP eCLIP17.58■□□□□ 0.41
COL25A1-203ENST00000399132 UBE4AQ14139 1066 aa17.58■□□□□ 0.41
COL25A1-203ENST00000399132 CSPP1Q1MSJ5 1256 aa17.58■□□□□ 0.41
COL25A1-203ENST00000399132 MFSD6Q6ZSS7 791 aa17.58■□□□□ 0.41
COL25A1-203ENST00000399132 ZNF384Q8TF68 577 aa17.58■□□□□ 0.41
COL25A1-203ENST00000399132 PGBD1Q96JS3 809 aa17.58■□□□□ 0.41
COL25A1-203ENST00000399132 LLPHQ9BRT6 129 aaKnown RBP17.58■□□□□ 0.41
COL25A1-203ENST00000399132 RREB1Q92766 1687 aa17.58■□□□□ 0.4
COL25A1-203ENST00000399132 HMGN5P82970 282 aaKnown RBP17.58■□□□□ 0.4
COL25A1-203ENST00000399132 TICAM2Q86XR7 235 aa17.58■□□□□ 0.4
COL25A1-203ENST00000399132 MAP7D2Q96T17 732 aa17.58■□□□□ 0.4
COL25A1-203ENST00000399132 AATFQ9NY61 560 aaKnown RBP eCLIP17.58■□□□□ 0.4
COL25A1-203ENST00000399132 SLC10A5Q5PT55 438 aa17.57■□□□□ 0.4
COL25A1-203ENST00000399132 NAA16Q6N069 864 aaPredicted RBP17.57■□□□□ 0.4
COL25A1-203ENST00000399132 C8orf76Q96K31 380 aa17.57■□□□□ 0.4
COL25A1-203ENST00000399132 USP28Q96RU2 1077 aa17.57■□□□□ 0.4
COL25A1-203ENST00000399132 SH2B2O14492 632 aaPredicted RBP17.57■□□□□ 0.4
COL25A1-203ENST00000399132 TM4SF1P30408 202 aa17.57■□□□□ 0.4
COL25A1-203ENST00000399132 HIBADHP31937 336 aaKnown RBP17.57■□□□□ 0.4
COL25A1-203ENST00000399132 NACAP1Q9BZK3 213 aa17.57■□□□□ 0.4
COL25A1-203ENST00000399132 NR1I2O75469 434 aa17.56■□□□□ 0.4
COL25A1-203ENST00000399132 SCAND2PQ9GZW5 306 aaPredicted RBP17.56■□□□□ 0.4
COL25A1-203ENST00000399132 AKNAD1Q5T1N1 836 aa17.56■□□□□ 0.4
COL25A1-203ENST00000399132 APOA5Q6Q788 366 aa17.56■□□□□ 0.4
COL25A1-203ENST00000399132 ILDR1Q86SU0 546 aaPredicted RBP17.56■□□□□ 0.4
COL25A1-203ENST00000399132 NUP133Q8WUM0 1156 aa17.56■□□□□ 0.4
COL25A1-203ENST00000399132 ZNF804BA4D1E1 1349 aa17.56■□□□□ 0.4
COL25A1-203ENST00000399132 SALL1Q9NSC2 1324 aa17.56■□□□□ 0.4
COL25A1-203ENST00000399132 ATRNO75882 1429 aa17.56■□□□□ 0.4
COL25A1-203ENST00000399132 BCORQ6W2J9 1755 aa17.56■□□□□ 0.4
COL25A1-203ENST00000399132 BRD2P25440 801 aaKnown RBP17.55■□□□□ 0.4
COL25A1-203ENST00000399132 MECOMQ03112 1051 aa17.55■□□□□ 0.4
COL25A1-203ENST00000399132 IGDCC4Q8TDY8 1250 aa17.55■□□□□ 0.4
COL25A1-203ENST00000399132 FAM13BQ9NYF5 915 aa17.55■□□□□ 0.4
COL25A1-203ENST00000399132 A0A087WWV3 80 aa17.55■□□□□ 0.4
COL25A1-203ENST00000399132 PAXIP1Q6ZW49 1069 aaPredicted RBP17.55■□□□□ 0.4
COL25A1-203ENST00000399132 ERCC4Q92889 916 aaPredicted RBP17.55■□□□□ 0.4
COL25A1-203ENST00000399132 FBXW7Q969H0 707 aa17.55■□□□□ 0.4
COL25A1-203ENST00000399132 LY9Q9HBG7 655 aa17.55■□□□□ 0.4
COL25A1-203ENST00000399132 CCDC69A6NI79 296 aa17.54■□□□□ 0.4
COL25A1-203ENST00000399132 GOLGA8AA7E2F4 631 aa17.54■□□□□ 0.4
COL25A1-203ENST00000399132 ZBTB43O43298 467 aa17.54■□□□□ 0.4
COL25A1-203ENST00000399132 PPARAQ07869 468 aa17.54■□□□□ 0.4
COL25A1-203ENST00000399132 CCDC173Q0VFZ6 552 aa17.54■□□□□ 0.4
COL25A1-203ENST00000399132 PRR5LQ6MZQ0 368 aa17.54■□□□□ 0.4
COL25A1-203ENST00000399132 KIF3AQ9Y496 699 aa17.54■□□□□ 0.4
COL25A1-203ENST00000399132 SLC12A7Q9Y666 1083 aa17.54■□□□□ 0.4
COL25A1-203ENST00000399132 ZSCAN16Q9H4T2 348 aaPredicted RBP17.54■□□□□ 0.4
COL25A1-203ENST00000399132 KIF28PB7ZC32 967 aa17.53■□□□□ 0.4
COL25A1-203ENST00000399132 DHX16O60231 1041 aaKnown RBP17.53■□□□□ 0.4
COL25A1-203ENST00000399132 RANBP6O60518 1105 aaKnown RBP17.53■□□□□ 0.4
COL25A1-203ENST00000399132 ME1P48163 572 aa17.53■□□□□ 0.4
COL25A1-203ENST00000399132 USP25Q9UHP3 1055 aa17.53■□□□□ 0.4
COL25A1-203ENST00000399132 hCG_1642624A0A1W2PR95 340 aa17.53■□□□□ 0.4
COL25A1-203ENST00000399132 KRT27Q7Z3Y8 459 aa17.53■□□□□ 0.4
COL25A1-203ENST00000399132 FBXO33Q7Z6M2 555 aa17.53■□□□□ 0.4
COL25A1-203ENST00000399132 RPGRQ92834 1020 aaKnown RBP17.53■□□□□ 0.4
COL25A1-203ENST00000399132 RIOK1Q9BRS2 568 aaKnown RBP17.53■□□□□ 0.4
COL25A1-203ENST00000399132 SLC26A6Q9BXS9 759 aa17.53■□□□□ 0.4
COL25A1-203ENST00000399132 NUP62CLQ9H1M0 184 aa17.53■□□□□ 0.4
COL25A1-203ENST00000399132 GYS1P13807 737 aa17.52■□□□□ 0.4
COL25A1-203ENST00000399132 EVCP57679 992 aa17.52■□□□□ 0.4
COL25A1-203ENST00000399132 GRIK5Q16478 980 aa17.52■□□□□ 0.4
COL25A1-203ENST00000399132 ALG1Q9BT22 464 aa17.52■□□□□ 0.4
COL25A1-203ENST00000399132 PRDM10Q9NQV6 1147 aa17.52■□□□□ 0.4
COL25A1-203ENST00000399132 CYP2D6P10635 497 aa17.52■□□□□ 0.39
COL25A1-203ENST00000399132 TNMDQ9H2S6 317 aa17.52■□□□□ 0.39
COL25A1-203ENST00000399132 CFAP45Q9UL16 551 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms