RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 MTMR3Q13615 1198 aa9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 ISM2Q6H9L7 571 aa9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 SELENOSQ9BQE4 189 aa9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 IFNKQ9P0W0 207 aa9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 MARCKSP29966 332 aaPredicted RBP9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 APOBRQ0VD83 1088 aa9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 LIN9Q5TKA1 542 aa9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 TPTE2Q6XPS3 522 aa9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 OTUD6BQ8N6M0 293 aa9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 UBL4BQ8N7F7 174 aa9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 IRS4O14654 1257 aaPredicted RBP9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 GNA14O95837 355 aa9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 PUM3Q15397 648 aaKnown RBP9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 PPP1R7Q15435 360 aa9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 FYB2Q5VWT5 728 aa9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 TSHZ3Q63HK5 1081 aa9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 TMEM87AQ8NBN3 555 aa9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 RPGRIP1Q96KN7 1286 aa9.39□□□□□ -0.91
SPTLC3-201ENST00000399002 CAPN2P17655 700 aa9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 LACTBP83111 547 aaPredicted RBP9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 WDR44Q5JSH3 913 aa9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 DDX23Q9BUQ8 820 aaKnown RBP9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 RSPH14Q9UHP6 348 aa9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 SLC27A2O14975 620 aa9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 ACTN4O43707 911 aaKnown RBP9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 HOXC9P31274 260 aa9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 AFAP1L1Q8TED9 768 aa9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 HOOK2Q96ED9 719 aa9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 NGLY1Q96IV0 654 aa9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 METTL22Q9BUU2 404 aaPredicted RBP9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 CTNND2Q9UQB3 1225 aa9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 SPDYE4A6NLX3 237 aa9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 ARID4AP29374 1257 aaPredicted RBP9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 ASIC2Q16515 512 aa9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 IFT20Q8IY31 132 aa9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 OGFOD1Q8N543 542 aa9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 MAK16Q9BXY0 300 aaKnown RBP9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 DDX21Q9NR30 783 aaKnown RBP eCLIP9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 NIP7Q9Y221 180 aaKnown RBP eCLIP9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 SYNRGQ9UMZ2 1314 aa9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 MCM7P33993 719 aa9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 MAP7D1Q3KQU3 841 aa9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 ANO1Q5XXA6 986 aa9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 CDAN1Q8IWY9 1227 aa9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 RSRC1Q96IZ7 334 aaKnown RBP9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 HAUS2Q9NVX0 235 aa9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 ZBTB7BO15156 539 aaPredicted RBP9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 KRT25Q7Z3Z0 450 aa9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 NKIRAS1Q9NYS0 192 aa9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 VPS18Q9P253 973 aa9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 UTP11Q9Y3A2 253 aaKnown RBP9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 ATP6V0A2Q9Y487 856 aa9.38□□□□□ -0.91
SPTLC3-201ENST00000399002 EEF2P13639 858 aaKnown RBP9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 PTGS1P23219 599 aa9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 GABPB1Q06547 395 aaPredicted RBP9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 WDR78Q5VTH9 848 aa9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 TMTC1Q8IUR5 882 aa9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 AFAP1L2Q8N4X5 818 aa9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 ATRIPQ8WXE1 791 aa9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 BICC1Q9H694 974 aaKnown RBP9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 PARP2Q9UGN5 583 aa9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 KDM2BQ8NHM5 1336 aa9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 MROH5Q6ZUA9 1318 aa9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 TAOK1Q7L7X3 1001 aa9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 ZNF622Q969S3 477 aaKnown RBP eCLIP9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 NOC4LQ9BVI4 516 aaKnown RBP9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 SAMD9Q5K651 1589 aa9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 TRIM37O94972 964 aa9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 HOXA7P31268 230 aaPredicted RBP9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 SMTNP53814 917 aa9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 MAP7Q14244 749 aa9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 TNNI3KQ59H18 835 aa9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 GUCA1BQ9UMX6 200 aa9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 FPGT-TNNI3KV9GXZ4 949 aa9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 GBP1P32455 592 aa9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 NOX5Q96PH1 765 aa9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 STIM2Q9P246 746 aa9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 TXNDC16Q9P2K2 825 aa9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 IBTKQ9P2D0 1353 aaPredicted RBP9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 MRPS9P82933 396 aaKnown RBP9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 ATP11AP98196 1134 aa9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 CCDC122Q5T0U0 273 aa9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 ZRANB1Q9UGI0 708 aa9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 FAM184BQ9ULE4 1060 aa9.37□□□□□ -0.91
SPTLC3-201ENST00000399002 STK10O94804 968 aaKnown RBP9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 MAP3K9P80192 1104 aa9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 PAK1Q13153 545 aa9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 SYT10Q6XYQ8 523 aa9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 CPLX4Q7Z7G2 160 aa9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 SIRT1Q96EB6 747 aa9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 DSCC1Q9BVC3 393 aa9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 TM6SF1Q9BZW5 370 aa9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 MCM9Q9NXL9 1143 aa9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 MCM6Q14566 821 aa9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 PPFIBP2Q8ND30 876 aa9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 UBE2Q2Q8WVN8 375 aa9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 APPBP2Q92624 585 aa9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 A0A1B0GUL7 405 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms