RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 NEMFO60524 1076 aa22.61■■□□□ 1.21
COL13A1-205ENST00000398978 SYT10Q6XYQ8 523 aa22.61■■□□□ 1.21
COL13A1-205ENST00000398978 BRINP3Q76B58 766 aa22.61■■□□□ 1.21
COL13A1-205ENST00000398978 TOMM22Q9NS69 142 aa22.61■■□□□ 1.21
COL13A1-205ENST00000398978 TBC1D2BQ9UPU7 963 aa22.61■■□□□ 1.21
COL13A1-205ENST00000398978 RIC1Q4ADV7 1423 aa22.61■■□□□ 1.21
COL13A1-205ENST00000398978 ATP2B1P20020 1258 aa22.61■■□□□ 1.21
COL13A1-205ENST00000398978 APOA5Q6Q788 366 aa22.61■■□□□ 1.21
COL13A1-205ENST00000398978 RANBP6O60518 1105 aaKnown RBP22.6■■□□□ 1.21
COL13A1-205ENST00000398978 CSF1RP07333 972 aa22.6■■□□□ 1.21
COL13A1-205ENST00000398978 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.6■■□□□ 1.21
COL13A1-205ENST00000398978 FANCCQ00597 558 aa22.6■■□□□ 1.21
COL13A1-205ENST00000398978 DMTNQ08495 405 aa22.6■■□□□ 1.21
COL13A1-205ENST00000398978 TRMT112Q9UI30 125 aaKnown RBP22.6■■□□□ 1.21
COL13A1-205ENST00000398978 SH2B2O14492 632 aaPredicted RBP22.59■■□□□ 1.21
COL13A1-205ENST00000398978 SFPQP23246 707 aaKnown RBP eCLIP22.59■■□□□ 1.21
COL13A1-205ENST00000398978 CMA1P23946 247 aa22.59■■□□□ 1.21
COL13A1-205ENST00000398978 SLC39A14Q15043 492 aa22.59■■□□□ 1.21
COL13A1-205ENST00000398978 FBXL16Q8N461 479 aa22.59■■□□□ 1.21
COL13A1-205ENST00000398978 SLC26A6Q9BXS9 759 aa22.59■■□□□ 1.21
COL13A1-205ENST00000398978 TACC3Q9Y6A5 838 aa22.59■■□□□ 1.21
COL13A1-205ENST00000398978 IRS4O14654 1257 aaPredicted RBP22.59■■□□□ 1.21
COL13A1-205ENST00000398978 GUCY1A2P33402 732 aa22.59■■□□□ 1.21
COL13A1-205ENST00000398978 CCDC102BQ68D86 513 aa22.59■■□□□ 1.21
COL13A1-205ENST00000398978 NLRP10Q86W26 655 aa22.59■■□□□ 1.21
COL13A1-205ENST00000398978 HSD3B7Q9H2F3 369 aa22.59■■□□□ 1.21
COL13A1-205ENST00000398978 ZMYM6O95789 1325 aa22.59■■□□□ 1.21
COL13A1-205ENST00000398978 PDE6AP16499 860 aa22.59■■□□□ 1.21
COL13A1-205ENST00000398978 PPP1R13BQ96KQ4 1090 aa22.59■■□□□ 1.21
COL13A1-205ENST00000398978 TMEM232C9JQI7 657 aa22.58■■□□□ 1.21
COL13A1-205ENST00000398978 GRIN1Q05586 938 aa22.58■■□□□ 1.21
COL13A1-205ENST00000398978 KMT5BQ4FZB7 885 aa22.58■■□□□ 1.21
COL13A1-205ENST00000398978 KCNJ14Q9UNX9 436 aa22.58■■□□□ 1.21
COL13A1-205ENST00000398978 ANKRD18BA2A2Z9 1011 aa22.58■■□□□ 1.2
COL13A1-205ENST00000398978 GOLGA8AA7E2F4 631 aa22.58■■□□□ 1.2
COL13A1-205ENST00000398978 PRKAB2O43741 272 aa22.58■■□□□ 1.2
COL13A1-205ENST00000398978 LONRF3Q496Y0 759 aa22.58■■□□□ 1.2
COL13A1-205ENST00000398978 TMEM67Q5HYA8 995 aa22.58■■□□□ 1.2
COL13A1-205ENST00000398978 KIF18AQ8NI77 898 aa22.58■■□□□ 1.2
COL13A1-205ENST00000398978 AIDAQ96BJ3 306 aa22.58■■□□□ 1.2
COL13A1-205ENST00000398978 OSBPL5Q9H0X9 879 aaPredicted RBP22.58■■□□□ 1.2
COL13A1-205ENST00000398978 CPDO75976 1380 aa22.57■■□□□ 1.2
COL13A1-205ENST00000398978 TMX1Q9H3N1 280 aa22.57■■□□□ 1.2
COL13A1-205ENST00000398978 ARMT1Q9H993 441 aa22.57■■□□□ 1.2
COL13A1-205ENST00000398978 ZBTB43O43298 467 aa22.57■■□□□ 1.2
COL13A1-205ENST00000398978 SERPINC1P01008 464 aa22.57■■□□□ 1.2
COL13A1-205ENST00000398978 GSDMDP57764 484 aa22.57■■□□□ 1.2
COL13A1-205ENST00000398978 FOXP4Q8IVH2 680 aaPredicted RBP22.57■■□□□ 1.2
COL13A1-205ENST00000398978 FAM177A1Q8N128 213 aaPredicted RBP22.57■■□□□ 1.2
COL13A1-205ENST00000398978 STRCP1A6NGW2 1772 aa22.57■■□□□ 1.2
COL13A1-205ENST00000398978 IARSP41252 1262 aaKnown RBP22.56■■□□□ 1.2
COL13A1-205ENST00000398978 CTSWP56202 376 aa22.56■■□□□ 1.2
COL13A1-205ENST00000398978 MAGEB6Q8N7X4 407 aa22.56■■□□□ 1.2
COL13A1-205ENST00000398978 NKX1-1Q15270 411 aaPredicted RBP22.56■■□□□ 1.2
COL13A1-205ENST00000398978 FAM217BQ9NTX9 383 aaPredicted RBP22.56■■□□□ 1.2
COL13A1-205ENST00000398978 ZBTB1Q9Y2K1 713 aa22.56■■□□□ 1.2
COL13A1-205ENST00000398978 PTPAQ15257 358 aa22.56■■□□□ 1.2
COL13A1-205ENST00000398978 ZNF827Q17R98 1081 aa22.56■■□□□ 1.2
COL13A1-205ENST00000398978 CFAP100Q494V2 611 aa22.56■■□□□ 1.2
COL13A1-205ENST00000398978 GIGYF2Q6Y7W6 1299 aaKnown RBP22.56■■□□□ 1.2
COL13A1-205ENST00000398978 CHMP4CQ96CF2 233 aa22.56■■□□□ 1.2
COL13A1-205ENST00000398978 ZSWIM5Q9P217 1185 aa22.56■■□□□ 1.2
COL13A1-205ENST00000398978 FBXO38Q6PIJ6 1188 aa22.55■■□□□ 1.2
COL13A1-205ENST00000398978 HOMER1Q86YM7 354 aa22.55■■□□□ 1.2
COL13A1-205ENST00000398978 GRAMD1CQ8IYS0 662 aa22.55■■□□□ 1.2
COL13A1-205ENST00000398978 IGDCC4Q8TDY8 1250 aa22.55■■□□□ 1.2
COL13A1-205ENST00000398978 SLC4A9Q96Q91 983 aa22.55■■□□□ 1.2
COL13A1-205ENST00000398978 EPB41L4AQ9HCS5 686 aaPredicted RBP22.55■■□□□ 1.2
COL13A1-205ENST00000398978 IQSEC3Q9UPP2 1182 aaPredicted RBP22.55■■□□□ 1.2
COL13A1-205ENST00000398978 MAP3K15Q6ZN16 1313 aa22.55■■□□□ 1.2
COL13A1-205ENST00000398978 UBN2Q6ZU65 1347 aa22.55■■□□□ 1.2
COL13A1-205ENST00000398978 BTBD18B2RXH4 712 aa22.55■■□□□ 1.2
COL13A1-205ENST00000398978 SMIM22K7EJ46 135 aa22.55■■□□□ 1.2
COL13A1-205ENST00000398978 IFIT3O14879 490 aaKnown RBP22.55■■□□□ 1.2
COL13A1-205ENST00000398978 MBD4O95243 580 aa22.55■■□□□ 1.2
COL13A1-205ENST00000398978 UBASH3AP57075 661 aa22.55■■□□□ 1.2
COL13A1-205ENST00000398978 PDE4BQ07343 736 aa22.55■■□□□ 1.2
COL13A1-205ENST00000398978 METTL16Q86W50 562 aaKnown RBP22.55■■□□□ 1.2
COL13A1-205ENST00000398978 LY9Q9HBG7 655 aa22.55■■□□□ 1.2
COL13A1-205ENST00000398978 ERCC6LQ2NKX8 1250 aa22.54■■□□□ 1.2
COL13A1-205ENST00000398978 FANCLQ9NW38 375 aa22.54■■□□□ 1.2
COL13A1-205ENST00000398978 CGNQ9P2M7 1197 aaKnown RBP22.54■■□□□ 1.2
COL13A1-205ENST00000398978 PDE8BO95263 885 aa22.54■■□□□ 1.2
COL13A1-205ENST00000398978 NTRK3Q16288 839 aa22.54■■□□□ 1.2
COL13A1-205ENST00000398978 PDILTQ8N807 584 aa22.54■■□□□ 1.2
COL13A1-205ENST00000398978 MAP3K14Q99558 947 aa22.54■■□□□ 1.2
COL13A1-205ENST00000398978 COL5A2P05997 1499 aaPredicted RBP22.54■■□□□ 1.2
COL13A1-205ENST00000398978 AKAP11Q9UKA4 1901 aa22.54■■□□□ 1.2
COL13A1-205ENST00000398978 TPM4P67936 248 aa22.54■■□□□ 1.2
COL13A1-205ENST00000398978 VGLL2Q8N8G2 317 aa22.54■■□□□ 1.2
COL13A1-205ENST00000398978 STRBPQ96SI9 672 aaKnown RBP22.54■■□□□ 1.2
COL13A1-205ENST00000398978 MIGA1Q8NAN2 632 aa22.53■■□□□ 1.2
COL13A1-205ENST00000398978 CARD10Q9BWT7 1032 aa22.53■■□□□ 1.2
COL13A1-205ENST00000398978 PCDHA5Q9Y5H7 936 aa22.53■■□□□ 1.2
COL13A1-205ENST00000398978 STARD3NLO95772 234 aa22.53■■□□□ 1.2
COL13A1-205ENST00000398978 TRIM28Q13263 835 aaKnown RBP22.53■■□□□ 1.2
COL13A1-205ENST00000398978 CNNM3Q8NE01 707 aa22.53■■□□□ 1.2
COL13A1-205ENST00000398978 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.53■■□□□ 1.2
COL13A1-205ENST00000398978 TRIM29Q14134 588 aa22.52■■□□□ 1.2
COL13A1-205ENST00000398978 NAPBQ9H115 298 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms