RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 MARCKSP29966 332 aaPredicted RBP16.17■□□□□ 0.18
PCDHA11-201ENST00000398640 IL6STP40189 918 aaPredicted RBP16.17■□□□□ 0.18
PCDHA11-201ENST00000398640 ARL1P40616 181 aaPredicted RBP16.17■□□□□ 0.18
PCDHA11-201ENST00000398640 Q6ZUG5 572 aa16.17■□□□□ 0.18
PCDHA11-201ENST00000398640 LRRC27Q9C0I9 530 aa16.17■□□□□ 0.18
PCDHA11-201ENST00000398640 AGLP35573 1532 aa16.17■□□□□ 0.18
PCDHA11-201ENST00000398640 KRT13P13646 458 aa16.17■□□□□ 0.18
PCDHA11-201ENST00000398640 GRIPAP1Q4V328 841 aa16.17■□□□□ 0.18
PCDHA11-201ENST00000398640 RNF17Q9BXT8 1623 aaKnown RBP16.17■□□□□ 0.18
PCDHA11-201ENST00000398640 ERBB4Q15303 1308 aa16.17■□□□□ 0.18
PCDHA11-201ENST00000398640 GCKRQ14397 625 aa16.17■□□□□ 0.18
PCDHA11-201ENST00000398640 ARHGEF10LQ9HCE6 1279 aa16.17■□□□□ 0.18
PCDHA11-201ENST00000398640 SULF1Q8IWU6 871 aa16.17■□□□□ 0.18
PCDHA11-201ENST00000398640 ZNF594Q96JF6 807 aaPredicted RBP16.17■□□□□ 0.18
PCDHA11-201ENST00000398640 NAA15Q9BXJ9 866 aaKnown RBP16.17■□□□□ 0.18
PCDHA11-201ENST00000398640 CSADQ9Y600 493 aa16.17■□□□□ 0.18
PCDHA11-201ENST00000398640 USP19O94966 1318 aa16.16■□□□□ 0.18
PCDHA11-201ENST00000398640 OVOS2A0A0G2JMS6 1433 aa16.16■□□□□ 0.18
PCDHA11-201ENST00000398640 OVOS2A0A0J9YW53 1432 aa16.16■□□□□ 0.18
PCDHA11-201ENST00000398640 OVOS2Q6IE36 1432 aa16.16■□□□□ 0.18
PCDHA11-201ENST00000398640 CLTCL1P53675 1640 aa16.16■□□□□ 0.18
PCDHA11-201ENST00000398640 GNAQP50148 359 aa16.16■□□□□ 0.18
PCDHA11-201ENST00000398640 TMTC2Q8N394 836 aa16.16■□□□□ 0.18
PCDHA11-201ENST00000398640 ZFP91Q96JP5 570 aaPredicted RBP16.16■□□□□ 0.18
PCDHA11-201ENST00000398640 SERPINA10Q9UK55 444 aa16.16■□□□□ 0.18
PCDHA11-201ENST00000398640 ACTN2P35609 894 aa16.16■□□□□ 0.18
PCDHA11-201ENST00000398640 ZNF165P49910 485 aa16.16■□□□□ 0.18
PCDHA11-201ENST00000398640 PYM1Q9BRP8 204 aaKnown RBP16.16■□□□□ 0.18
PCDHA11-201ENST00000398640 SPHKAPQ2M3C7 1700 aa16.16■□□□□ 0.18
PCDHA11-201ENST00000398640 SDSP20132 328 aa16.16■□□□□ 0.18
PCDHA11-201ENST00000398640 LPIN2Q92539 896 aa16.16■□□□□ 0.18
PCDHA11-201ENST00000398640 TNNQ9UQP3 1299 aa16.16■□□□□ 0.18
PCDHA11-201ENST00000398640 RBM25P49756 843 aaKnown RBP16.16■□□□□ 0.18
PCDHA11-201ENST00000398640 FSD2A1L4K1 749 aa16.16■□□□□ 0.18
PCDHA11-201ENST00000398640 PER1O15534 1290 aaPredicted RBP16.16■□□□□ 0.18
PCDHA11-201ENST00000398640 GIGYF1O75420 1035 aaPredicted RBP16.16■□□□□ 0.18
PCDHA11-201ENST00000398640 IL17REQ8NFR9 667 aa16.16■□□□□ 0.18
PCDHA11-201ENST00000398640 RNF216Q9NWF9 866 aaPredicted RBP16.16■□□□□ 0.18
PCDHA11-201ENST00000398640 RBM8AQ9Y5S9 174 aaKnown RBP16.16■□□□□ 0.18
PCDHA11-201ENST00000398640 TMEM110-MUSTN1A8MSY1 372 aa16.15■□□□□ 0.18
PCDHA11-201ENST00000398640 KCNQ3O43525 872 aa16.15■□□□□ 0.18
PCDHA11-201ENST00000398640 KIF22Q14807 665 aa16.15■□□□□ 0.18
PCDHA11-201ENST00000398640 IVNS1ABPQ9Y6Y0 642 aa16.15■□□□□ 0.18
PCDHA11-201ENST00000398640 A0A1B0GUL7 405 aa16.15■□□□□ 0.18
PCDHA11-201ENST00000398640 GTF2IP78347 998 aa16.15■□□□□ 0.18
PCDHA11-201ENST00000398640 BLMP54132 1417 aaPredicted RBP16.15■□□□□ 0.18
PCDHA11-201ENST00000398640 ZBTB7AO95365 584 aa16.15■□□□□ 0.18
PCDHA11-201ENST00000398640 ARID5AQ03989 594 aa16.15■□□□□ 0.18
PCDHA11-201ENST00000398640 TSNARE1Q96NA8 513 aa16.15■□□□□ 0.18
PCDHA11-201ENST00000398640 GPHNQ9NQX3 736 aaPredicted RBP16.15■□□□□ 0.18
PCDHA11-201ENST00000398640 RMND1Q9NWS8 449 aa16.15■□□□□ 0.18
PCDHA11-201ENST00000398640 AKR1B10O60218 316 aa16.15■□□□□ 0.18
PCDHA11-201ENST00000398640 VPS72Q15906 364 aa16.15■□□□□ 0.18
PCDHA11-201ENST00000398640 SLC27A3Q5K4L6 730 aa16.15■□□□□ 0.18
PCDHA11-201ENST00000398640 SPAG5Q96R06 1193 aa16.15■□□□□ 0.18
PCDHA11-201ENST00000398640 BMP2KLQ5H9B9 411 aa16.14■□□□□ 0.17
PCDHA11-201ENST00000398640 USP48Q86UV5 1035 aa16.14■□□□□ 0.17
PCDHA11-201ENST00000398640 HARSP12081 509 aaKnown RBP16.14■□□□□ 0.17
PCDHA11-201ENST00000398640 GSDMDP57764 484 aa16.14■□□□□ 0.17
PCDHA11-201ENST00000398640 ASIC1P78348 528 aa16.14■□□□□ 0.17
PCDHA11-201ENST00000398640 SNW1Q13573 536 aaKnown RBP16.14■□□□□ 0.17
PCDHA11-201ENST00000398640 DOK7Q18PE1 504 aa16.14■□□□□ 0.17
PCDHA11-201ENST00000398640 GPCPD1Q9NPB8 672 aa16.14■□□□□ 0.17
PCDHA11-201ENST00000398640 ZSCAN23Q3MJ62 389 aa16.14■□□□□ 0.17
PCDHA11-201ENST00000398640 CTR9Q6PD62 1173 aa16.14■□□□□ 0.17
PCDHA11-201ENST00000398640 TTLL7Q6ZT98 887 aa16.14■□□□□ 0.17
PCDHA11-201ENST00000398640 IMPG2Q9BZV3 1241 aa16.14■□□□□ 0.17
PCDHA11-201ENST00000398640 GINS2Q9Y248 185 aa16.14■□□□□ 0.17
PCDHA11-201ENST00000398640 FAM13AO94988 1023 aa16.14■□□□□ 0.17
PCDHA11-201ENST00000398640 NUCB1Q02818 461 aa16.14■□□□□ 0.17
PCDHA11-201ENST00000398640 CCDC93Q567U6 631 aa16.14■□□□□ 0.17
PCDHA11-201ENST00000398640 TTC41PQ6P2S7 1318 aa16.14■□□□□ 0.17
PCDHA11-201ENST00000398640 EP400NLQ6ZTU2 488 aa16.14■□□□□ 0.17
PCDHA11-201ENST00000398640 XAGE2Q96GT9 111 aa16.14■□□□□ 0.17
PCDHA11-201ENST00000398640 TMX3Q96JJ7 454 aa16.14■□□□□ 0.17
PCDHA11-201ENST00000398640 CEP63Q96MT8 703 aa16.14■□□□□ 0.17
PCDHA11-201ENST00000398640 ZKSCAN3Q9BRR0 538 aa16.14■□□□□ 0.17
PCDHA11-201ENST00000398640 TRERF1Q96PN7 1200 aa16.13■□□□□ 0.17
PCDHA11-201ENST00000398640 ZBTB1Q9Y2K1 713 aa16.13■□□□□ 0.17
PCDHA11-201ENST00000398640 PTGS1P23219 599 aa16.13■□□□□ 0.17
PCDHA11-201ENST00000398640 ZMYND15Q9H091 742 aa16.13■□□□□ 0.17
PCDHA11-201ENST00000398640 IKBKGQ9Y6K9 419 aa16.13■□□□□ 0.17
PCDHA11-201ENST00000398640 ABCA6Q8N139 1617 aa16.13■□□□□ 0.17
PCDHA11-201ENST00000398640 TMC4Q7Z404 712 aa16.13■□□□□ 0.17
PCDHA11-201ENST00000398640 PPP1R14CQ8TAE6 165 aa16.13■□□□□ 0.17
PCDHA11-201ENST00000398640 USP37Q86T82 979 aa16.13■□□□□ 0.17
PCDHA11-201ENST00000398640 IGSF1Q8N6C5 1336 aa16.13■□□□□ 0.17
PCDHA11-201ENST00000398640 UBASH3AP57075 661 aa16.13■□□□□ 0.17
PCDHA11-201ENST00000398640 UBE2HP62256 183 aa16.13■□□□□ 0.17
PCDHA11-201ENST00000398640 NMIQ13287 307 aaPredicted RBP16.13■□□□□ 0.17
PCDHA11-201ENST00000398640 KIAA0753Q2KHM9 967 aa16.13■□□□□ 0.17
PCDHA11-201ENST00000398640 ZBTB38Q8NAP3 1195 aaPredicted RBP16.13■□□□□ 0.17
PCDHA11-201ENST00000398640 PIGBQ92521 554 aa16.13■□□□□ 0.17
PCDHA11-201ENST00000398640 DHX58Q96C10 678 aa16.13■□□□□ 0.17
PCDHA11-201ENST00000398640 C1orf167Q5SNV9 1468 aa16.13■□□□□ 0.17
PCDHA11-201ENST00000398640 UNC13BO14795 1591 aa16.13■□□□□ 0.17
PCDHA11-201ENST00000398640 GNG11P61952 73 aa16.12■□□□□ 0.17
PCDHA11-201ENST00000398640 RXRAP19793 462 aa16.12■□□□□ 0.17
PCDHA11-201ENST00000398640 ZSCAN16Q9H4T2 348 aaPredicted RBP16.12■□□□□ 0.17
PCDHA11-201ENST00000398640 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms