RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 ZBTB7AO95365 584 aa4.73□□□□□ -1.65
UBE3A-202ENST00000397954 SEC24BO95487 1268 aa4.73□□□□□ -1.65
UBE3A-202ENST00000397954 PUS10Q3MIT2 529 aaKnown RBP4.73□□□□□ -1.65
UBE3A-202ENST00000397954 SDE2Q6IQ49 451 aa4.73□□□□□ -1.65
UBE3A-202ENST00000397954 ANKRD13DQ6ZTN6 518 aa4.73□□□□□ -1.65
UBE3A-202ENST00000397954 MCM10Q7L590 875 aa4.73□□□□□ -1.65
UBE3A-202ENST00000397954 LINS1Q8NG48 757 aa4.73□□□□□ -1.65
UBE3A-202ENST00000397954 TPCN2Q8NHX9 752 aa4.73□□□□□ -1.65
UBE3A-202ENST00000397954 NLRP3Q96P20 1036 aa4.73□□□□□ -1.65
UBE3A-202ENST00000397954 DUSP9Q99956 384 aaKnown RBP4.73□□□□□ -1.65
UBE3A-202ENST00000397954 API5Q9BZZ5 524 aaKnown RBP4.73□□□□□ -1.65
UBE3A-202ENST00000397954 ANKRD2Q9GZV1 360 aa4.73□□□□□ -1.65
UBE3A-202ENST00000397954 DMGDHQ9UI17 866 aaKnown RBP4.73□□□□□ -1.65
UBE3A-202ENST00000397954 MED23Q9ULK4 1368 aa4.72□□□□□ -1.65
UBE3A-202ENST00000397954 FANCIQ9NVI1 1328 aa4.72□□□□□ -1.65
UBE3A-202ENST00000397954 PDE8AO60658 829 aa4.72□□□□□ -1.65
UBE3A-202ENST00000397954 PTCD1O75127 700 aaKnown RBP4.72□□□□□ -1.65
UBE3A-202ENST00000397954 MAPK8P45983 427 aa4.72□□□□□ -1.65
UBE3A-202ENST00000397954 CCT4P50991 539 aaKnown RBP4.72□□□□□ -1.65
UBE3A-202ENST00000397954 GRAPQ13588 217 aa4.72□□□□□ -1.65
UBE3A-202ENST00000397954 CCDC152Q4G0S7 254 aa4.72□□□□□ -1.65
UBE3A-202ENST00000397954 JAZF1Q86VZ6 243 aa4.72□□□□□ -1.65
UBE3A-202ENST00000397954 GRAPLQ8TC17 118 aaPredicted RBP4.72□□□□□ -1.65
UBE3A-202ENST00000397954 CWC25Q9NXE8 425 aaPredicted RBP4.72□□□□□ -1.65
UBE3A-202ENST00000397954 SUGT1Q9Y2Z0 365 aa4.72□□□□□ -1.65
UBE3A-202ENST00000397954 PCDHGB7Q9Y5F8 929 aa4.72□□□□□ -1.65
UBE3A-202ENST00000397954 PAPPA2Q9BXP8 1791 aa4.72□□□□□ -1.65
UBE3A-202ENST00000397954 COL4A1P02462 1669 aa4.72□□□□□ -1.65
UBE3A-202ENST00000397954 KCNA3P22001 575 aa4.72□□□□□ -1.65
UBE3A-202ENST00000397954 EML3Q32P44 896 aa4.72□□□□□ -1.65
UBE3A-202ENST00000397954 TWISTNBQ3B726 338 aaPredicted RBP4.72□□□□□ -1.65
UBE3A-202ENST00000397954 ARSIQ5FYB1 569 aa4.72□□□□□ -1.65
UBE3A-202ENST00000397954 NBPF10Q6P3W6 841 aaKnown RBP4.72□□□□□ -1.65
UBE3A-202ENST00000397954 C2CD5Q86YS7 1000 aa4.72□□□□□ -1.65
UBE3A-202ENST00000397954 NBPF15Q8N660 670 aa4.72□□□□□ -1.65
UBE3A-202ENST00000397954 RPGRQ92834 1020 aaKnown RBP4.72□□□□□ -1.65
UBE3A-202ENST00000397954 HHIPL1Q96JK4 782 aa4.72□□□□□ -1.65
UBE3A-202ENST00000397954 CCSER2Q9H7U1 834 aa4.72□□□□□ -1.65
UBE3A-202ENST00000397954 CUEDC1Q9NWM3 386 aaPredicted RBP4.72□□□□□ -1.65
UBE3A-202ENST00000397954 ATP6V0A2Q9Y487 856 aa4.72□□□□□ -1.65
UBE3A-202ENST00000397954 PCDHB9Q9Y5E1 797 aa4.72□□□□□ -1.65
UBE3A-202ENST00000397954 FOCADQ5VW36 1801 aa4.72□□□□□ -1.65
UBE3A-202ENST00000397954 COL2A1P02458 1487 aaPredicted RBP4.72□□□□□ -1.65
UBE3A-202ENST00000397954 APAF1O14727 1248 aa4.71□□□□□ -1.65
UBE3A-202ENST00000397954 SEC13P55735 322 aa4.71□□□□□ -1.65
UBE3A-202ENST00000397954 SLFN5Q08AF3 891 aa4.71□□□□□ -1.65
UBE3A-202ENST00000397954 TBC1D9BQ66K14 1250 aa4.71□□□□□ -1.65
UBE3A-202ENST00000397954 CCDC102BQ68D86 513 aa4.71□□□□□ -1.65
UBE3A-202ENST00000397954 PPP1R18Q6NYC8 613 aa4.71□□□□□ -1.65
UBE3A-202ENST00000397954 PNMA8AQ86V59 439 aaPredicted RBP4.71□□□□□ -1.65
UBE3A-202ENST00000397954 NLRP10Q86W26 655 aa4.71□□□□□ -1.65
UBE3A-202ENST00000397954 SIX5Q8N196 739 aa4.71□□□□□ -1.65
UBE3A-202ENST00000397954 TSEN2Q8NCE0 465 aaKnown RBP4.71□□□□□ -1.65
UBE3A-202ENST00000397954 C7orf43Q8WVR3 580 aa4.71□□□□□ -1.65
UBE3A-202ENST00000397954 HINFPQ9BQA5 517 aa4.71□□□□□ -1.65
UBE3A-202ENST00000397954 NIP7Q9Y221 180 aaKnown RBP eCLIP4.71□□□□□ -1.65
UBE3A-202ENST00000397954 LEMD3Q9Y2U8 911 aa4.71□□□□□ -1.65
UBE3A-202ENST00000397954 PITPNM2Q9BZ72 1349 aa4.71□□□□□ -1.66
UBE3A-202ENST00000397954 SLC39A6Q13433 755 aa4.71□□□□□ -1.66
UBE3A-202ENST00000397954 GPR162Q16538 588 aa4.71□□□□□ -1.66
UBE3A-202ENST00000397954 ZNF394Q53GI3 561 aa4.71□□□□□ -1.66
UBE3A-202ENST00000397954 LYPD8Q6UX82 237 aa4.71□□□□□ -1.66
UBE3A-202ENST00000397954 RETREG3Q86VR2 466 aa4.71□□□□□ -1.66
UBE3A-202ENST00000397954 TAOK3Q9H2K8 898 aa4.71□□□□□ -1.66
UBE3A-202ENST00000397954 USP16Q9Y5T5 823 aa4.71□□□□□ -1.66
UBE3A-202ENST00000397954 MRPL42Q9Y6G3 142 aaKnown RBP4.71□□□□□ -1.66
UBE3A-202ENST00000397954 DOCK2Q92608 1830 aa4.71□□□□□ -1.66
UBE3A-202ENST00000397954 TREHO43280 583 aa4.71□□□□□ -1.66
UBE3A-202ENST00000397954 CFHP08603 1231 aa4.71□□□□□ -1.66
UBE3A-202ENST00000397954 GTF2IP78347 998 aa4.71□□□□□ -1.66
UBE3A-202ENST00000397954 BMS1Q14692 1282 aaKnown RBP4.71□□□□□ -1.66
UBE3A-202ENST00000397954 TNIP1Q15025 636 aa4.71□□□□□ -1.66
UBE3A-202ENST00000397954 OXLD1Q5BKU9 147 aa4.71□□□□□ -1.66
UBE3A-202ENST00000397954 RNF19BQ6ZMZ0 732 aa4.71□□□□□ -1.66
UBE3A-202ENST00000397954 PACS2Q86VP3 889 aa4.71□□□□□ -1.66
UBE3A-202ENST00000397954 H7C1W4 665 aa4.7□□□□□ -1.66
UBE3A-202ENST00000397954 PPEF1O14829 653 aaPredicted RBP4.7□□□□□ -1.66
UBE3A-202ENST00000397954 LDHBP07195 334 aaKnown RBP4.7□□□□□ -1.66
UBE3A-202ENST00000397954 DPEP1P16444 411 aa4.7□□□□□ -1.66
UBE3A-202ENST00000397954 USP50Q70EL3 339 aaPredicted RBP4.7□□□□□ -1.66
UBE3A-202ENST00000397954 DDX46Q7L014 1031 aaKnown RBP4.7□□□□□ -1.66
UBE3A-202ENST00000397954 GPC2Q8N158 579 aa4.7□□□□□ -1.66
UBE3A-202ENST00000397954 DPF2Q92785 391 aa4.7□□□□□ -1.66
UBE3A-202ENST00000397954 CCDC85AQ96PX6 553 aaPredicted RBP4.7□□□□□ -1.66
UBE3A-202ENST00000397954 MRIQ9BWK5 157 aa4.7□□□□□ -1.66
UBE3A-202ENST00000397954 TGIF2Q9GZN2 237 aa4.7□□□□□ -1.66
UBE3A-202ENST00000397954 SEPT9Q9UHD8 586 aaPredicted RBP4.7□□□□□ -1.66
UBE3A-202ENST00000397954 SLC27A5Q9Y2P5 690 aa4.7□□□□□ -1.66
UBE3A-202ENST00000397954 PPP2R3BQ9Y5P8 575 aa4.7□□□□□ -1.66
UBE3A-202ENST00000397954 RPAP1Q9BWH6 1393 aaPredicted RBP4.7□□□□□ -1.66
UBE3A-202ENST00000397954 LOC102724159A0A0B4J2E5 919 aa4.7□□□□□ -1.66
UBE3A-202ENST00000397954 FZD9O00144 591 aa4.7□□□□□ -1.66
UBE3A-202ENST00000397954 VAMP4O75379 141 aa4.7□□□□□ -1.66
UBE3A-202ENST00000397954 PARNO95453 639 aaKnown RBP4.7□□□□□ -1.66
UBE3A-202ENST00000397954 F12P00748 615 aaPredicted RBP4.7□□□□□ -1.66
UBE3A-202ENST00000397954 CSF1RP07333 972 aa4.7□□□□□ -1.66
UBE3A-202ENST00000397954 YY1P25490 414 aa4.7□□□□□ -1.66
UBE3A-202ENST00000397954 NT5C2P49902 561 aa4.7□□□□□ -1.66
UBE3A-202ENST00000397954 FMR1Q06787 632 aaKnown RBP eCLIP4.7□□□□□ -1.666e-6■■□□□ 12.1
UBE3A-202ENST00000397954 COL19A1Q14993 1142 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms