RNA–Protein interactions for RNA: ENST00000397821.7

SH3KBP1-205, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3KBP1, Length 4,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-205ENST00000397821 A6NNZ2 444 aa16.23■□□□□ 0.19
SH3KBP1-205ENST00000397821 B4E1Z4 1266 aa16.23■□□□□ 0.19
SH3KBP1-205ENST00000397821 IL13P35225 146 aa16.23■□□□□ 0.19
SH3KBP1-205ENST00000397821 PPFIA1Q13136 1202 aa16.23■□□□□ 0.19
SH3KBP1-205ENST00000397821 TUBB8Q3ZCM7 444 aa16.23■□□□□ 0.19
SH3KBP1-205ENST00000397821 STXBP4Q6ZWJ1 553 aa16.23■□□□□ 0.19
SH3KBP1-205ENST00000397821 TSGA10Q9BZW7 698 aa16.23■□□□□ 0.19
SH3KBP1-205ENST00000397821 A2MP01023 1474 aa16.23■□□□□ 0.19
SH3KBP1-205ENST00000397821 SHANK2Q9UPX8 1470 aa16.23■□□□□ 0.19
SH3KBP1-205ENST00000397821 MAP2K2P36507 400 aa16.23■□□□□ 0.19
SH3KBP1-205ENST00000397821 NOC4LQ9BVI4 516 aaKnown RBP16.23■□□□□ 0.19
SH3KBP1-205ENST00000397821 TAB2Q9NYJ8 693 aa16.23■□□□□ 0.19
SH3KBP1-205ENST00000397821 PRPHP41219 470 aa16.22■□□□□ 0.19
SH3KBP1-205ENST00000397821 ARHGAP25P42331 645 aa16.22■□□□□ 0.19
SH3KBP1-205ENST00000397821 MXRA7P84157 204 aa16.22■□□□□ 0.19
SH3KBP1-205ENST00000397821 CUL5Q93034 780 aa16.22■□□□□ 0.19
SH3KBP1-205ENST00000397821 GNAQP50148 359 aa16.22■□□□□ 0.19
SH3KBP1-205ENST00000397821 PTH1RQ03431 593 aa16.22■□□□□ 0.19
SH3KBP1-205ENST00000397821 PNMA8AQ86V59 439 aaPredicted RBP16.22■□□□□ 0.19
SH3KBP1-205ENST00000397821 CDC5LQ99459 802 aaKnown RBP16.22■□□□□ 0.19
SH3KBP1-205ENST00000397821 TPCN1Q9ULQ1 816 aa16.22■□□□□ 0.19
SH3KBP1-205ENST00000397821 MRVI1Q9Y6F6 885 aa16.22■□□□□ 0.19
SH3KBP1-205ENST00000397821 NAPAP54920 295 aa16.22■□□□□ 0.19
SH3KBP1-205ENST00000397821 LACTBP83111 547 aaPredicted RBP16.22■□□□□ 0.19
SH3KBP1-205ENST00000397821 ADALQ6DHV7 355 aa16.22■□□□□ 0.19
SH3KBP1-205ENST00000397821 PPP1R14CQ8TAE6 165 aa16.22■□□□□ 0.19
SH3KBP1-205ENST00000397821 NSFL1CQ9UNZ2 370 aaKnown RBP16.22■□□□□ 0.19
SH3KBP1-205ENST00000397821 CEP83Q9Y592 693 aa16.22■□□□□ 0.19
SH3KBP1-205ENST00000397821 MTRF1LQ9UGC7 380 aaKnown RBP16.21■□□□□ 0.19
SH3KBP1-205ENST00000397821 ZNF521Q96K83 1311 aa16.21■□□□□ 0.19
SH3KBP1-205ENST00000397821 STAMBPO95630 424 aa16.21■□□□□ 0.19
SH3KBP1-205ENST00000397821 MIGA1Q8NAN2 632 aa16.21■□□□□ 0.19
SH3KBP1-205ENST00000397821 ANGEL1Q9UNK9 670 aaKnown RBP16.21■□□□□ 0.19
SH3KBP1-205ENST00000397821 POSTNQ15063 836 aa16.21■□□□□ 0.19
SH3KBP1-205ENST00000397821 PPP2R2CQ9Y2T4 447 aa16.21■□□□□ 0.19
SH3KBP1-205ENST00000397821 FLT4P35916 1363 aa16.21■□□□□ 0.19
SH3KBP1-205ENST00000397821 USP19O94966 1318 aa16.21■□□□□ 0.19
SH3KBP1-205ENST00000397821 NCKAP5LQ9HCH0 1330 aa16.21■□□□□ 0.19
SH3KBP1-205ENST00000397821 TNNI3KQ59H18 835 aa16.21■□□□□ 0.18
SH3KBP1-205ENST00000397821 KRT40Q6A162 431 aa16.21■□□□□ 0.18
SH3KBP1-205ENST00000397821 FPGT-TNNI3KV9GXZ4 949 aa16.21■□□□□ 0.18
SH3KBP1-205ENST00000397821 CCDC160A6NGH7 325 aa16.2■□□□□ 0.18
SH3KBP1-205ENST00000397821 MYSM1Q5VVJ2 828 aa16.2■□□□□ 0.18
SH3KBP1-205ENST00000397821 KRT79Q5XKE5 535 aa16.2■□□□□ 0.18
SH3KBP1-205ENST00000397821 GPIHBP1Q8IV16 184 aa16.2■□□□□ 0.18
SH3KBP1-205ENST00000397821 RGS22Q8NE09 1264 aa16.2■□□□□ 0.18
SH3KBP1-205ENST00000397821 HELBQ8NG08 1087 aaPredicted RBP16.2■□□□□ 0.18
SH3KBP1-205ENST00000397821 SECISBP2LQ93073 1101 aaKnown RBP16.2■□□□□ 0.18
SH3KBP1-205ENST00000397821 NPATQ14207 1427 aa16.2■□□□□ 0.18
SH3KBP1-205ENST00000397821 DENND4BO75064 1496 aaPredicted RBP16.2■□□□□ 0.18
SH3KBP1-205ENST00000397821 TMEM110-MUSTN1A8MSY1 372 aa16.2■□□□□ 0.18
SH3KBP1-205ENST00000397821 BAG3O95817 575 aa16.2■□□□□ 0.18
SH3KBP1-205ENST00000397821 PNOCQ13519 176 aa16.2■□□□□ 0.18
SH3KBP1-205ENST00000397821 PHKBQ93100 1093 aa16.2■□□□□ 0.18
SH3KBP1-205ENST00000397821 IQCGQ9H095 443 aaKnown RBP16.2■□□□□ 0.18
SH3KBP1-205ENST00000397821 TSPY3P0CV98 308 aa16.2■□□□□ 0.18
SH3KBP1-205ENST00000397821 TSPY8P0CW00 308 aa16.2■□□□□ 0.18
SH3KBP1-205ENST00000397821 SF3A3Q12874 501 aaKnown RBP eCLIP16.2■□□□□ 0.18
SH3KBP1-205ENST00000397821 IFT20Q8IY31 132 aa16.2■□□□□ 0.18
SH3KBP1-205ENST00000397821 TDRD7Q8NHU6 1098 aaKnown RBP16.2■□□□□ 0.18
SH3KBP1-205ENST00000397821 STAMQ92783 540 aa16.2■□□□□ 0.18
SH3KBP1-205ENST00000397821 EDC3Q96F86 508 aaKnown RBP16.2■□□□□ 0.18
SH3KBP1-205ENST00000397821 MAP3K5Q99683 1374 aa16.2■□□□□ 0.18
SH3KBP1-205ENST00000397821 LDHCP07864 332 aa16.2■□□□□ 0.18
SH3KBP1-205ENST00000397821 LIG3P49916 1009 aa16.2■□□□□ 0.18
SH3KBP1-205ENST00000397821 RAPGEF1Q13905 1077 aa16.2■□□□□ 0.18
SH3KBP1-205ENST00000397821 CSGALNACT2Q8N6G5 542 aa16.2■□□□□ 0.18
SH3KBP1-205ENST00000397821 LRRC59Q96AG4 307 aaKnown RBP16.2■□□□□ 0.18
SH3KBP1-205ENST00000397821 DNMT1P26358 1616 aaKnown RBP16.19■□□□□ 0.18
SH3KBP1-205ENST00000397821 RGS12O14924 1447 aa16.19■□□□□ 0.18
SH3KBP1-205ENST00000397821 ACTN2P35609 894 aa16.19■□□□□ 0.18
SH3KBP1-205ENST00000397821 RASEFQ8IZ41 740 aa16.19■□□□□ 0.18
SH3KBP1-205ENST00000397821 HGSO14964 777 aaPredicted RBP16.19■□□□□ 0.18
SH3KBP1-205ENST00000397821 CALM1P0DP23 149 aa16.19■□□□□ 0.18
SH3KBP1-205ENST00000397821 CALM2P0DP24 149 aa16.19■□□□□ 0.18
SH3KBP1-205ENST00000397821 CALM3P0DP25 149 aa16.19■□□□□ 0.18
SH3KBP1-205ENST00000397821 SETDB1Q15047 1291 aa16.19■□□□□ 0.18
SH3KBP1-205ENST00000397821 GOLGA5Q8TBA6 731 aa16.19■□□□□ 0.18
SH3KBP1-205ENST00000397821 DDX21Q9NR30 783 aaKnown RBP eCLIP16.19■□□□□ 0.18
SH3KBP1-205ENST00000397821 MAP3K19Q56UN5 1328 aa16.19■□□□□ 0.18
SH3KBP1-205ENST00000397821 SEC31AO94979 1220 aaKnown RBP16.19■□□□□ 0.18
SH3KBP1-205ENST00000397821 PFKFB1P16118 471 aa16.19■□□□□ 0.18
SH3KBP1-205ENST00000397821 MAP3K9P80192 1104 aa16.19■□□□□ 0.18
SH3KBP1-205ENST00000397821 PAK1Q13153 545 aa16.19■□□□□ 0.18
SH3KBP1-205ENST00000397821 KBTBD3Q8NAB2 608 aa16.19■□□□□ 0.18
SH3KBP1-205ENST00000397821 DDX12PQ92771 950 aa16.19■□□□□ 0.18
SH3KBP1-205ENST00000397821 PDE11AQ9HCR9 933 aa16.19■□□□□ 0.18
SH3KBP1-205ENST00000397821 PSDA5PKW4 1024 aaPredicted RBP16.19■□□□□ 0.18
SH3KBP1-205ENST00000397821 NEBLO76041 1014 aa16.19■□□□□ 0.18
SH3KBP1-205ENST00000397821 MAGEA1P43355 309 aa16.19■□□□□ 0.18
SH3KBP1-205ENST00000397821 MAGEB6Q8N7X4 407 aa16.19■□□□□ 0.18
SH3KBP1-205ENST00000397821 BCAS4Q8TDM0 211 aa16.19■□□□□ 0.18
SH3KBP1-205ENST00000397821 TEX13AQ9BXU3 409 aaPredicted RBP16.19■□□□□ 0.18
SH3KBP1-205ENST00000397821 CAPN7Q9Y6W3 813 aa16.19■□□□□ 0.18
SH3KBP1-205ENST00000397821 SSH2Q76I76 1423 aa16.18■□□□□ 0.18
SH3KBP1-205ENST00000397821 NFATC2IPQ8NCF5 419 aa16.18■□□□□ 0.18
SH3KBP1-205ENST00000397821 CCDC26Q8TAB7 109 aa16.18■□□□□ 0.18
SH3KBP1-205ENST00000397821 ERMNQ8TAM6 284 aa16.18■□□□□ 0.18
SH3KBP1-205ENST00000397821 ZSWIM6Q9HCJ5 1215 aa16.18■□□□□ 0.18
SH3KBP1-205ENST00000397821 WWC3Q9ULE0 1092 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms