RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 ALDH1B1P30837 517 aa6.83□□□□□ -1.32
PTPRD-206ENST00000397617 RASGRF1Q13972 1273 aa6.83□□□□□ -1.32
PTPRD-206ENST00000397617 APOA5Q6Q788 366 aa6.83□□□□□ -1.32
PTPRD-206ENST00000397617 CCDC73Q6ZRK6 1079 aa6.83□□□□□ -1.32
PTPRD-206ENST00000397617 NSUN7Q8NE18 718 aaKnown RBP6.83□□□□□ -1.32
PTPRD-206ENST00000397617 TDRD7Q8NHU6 1098 aaKnown RBP6.83□□□□□ -1.32
PTPRD-206ENST00000397617 TCRBV5S4A2TA0A5A2 114 aa6.83□□□□□ -1.32
PTPRD-206ENST00000397617 OSBP2Q969R2 916 aa6.83□□□□□ -1.32
PTPRD-206ENST00000397617 SH3GLB2Q9NR46 395 aa6.83□□□□□ -1.32
PTPRD-206ENST00000397617 CEP131Q9UPN4 1083 aa6.83□□□□□ -1.32
PTPRD-206ENST00000397617 CACNA1SQ13698 1873 aa6.83□□□□□ -1.32
PTPRD-206ENST00000397617 ERICH2A1L162 156 aa6.83□□□□□ -1.32
PTPRD-206ENST00000397617 KIF2AO00139 706 aaPredicted RBP6.83□□□□□ -1.32
PTPRD-206ENST00000397617 PIP4K2AP48426 406 aaPredicted RBP6.83□□□□□ -1.32
PTPRD-206ENST00000397617 TOB2Q14106 344 aaPredicted RBP6.83□□□□□ -1.32
PTPRD-206ENST00000397617 LAD1O00515 517 aa6.83□□□□□ -1.32
PTPRD-206ENST00000397617 ME3Q16798 604 aa6.83□□□□□ -1.32
PTPRD-206ENST00000397617 ZNF804AQ7Z570 1209 aa6.83□□□□□ -1.32
PTPRD-206ENST00000397617 BPIFA3Q9BQP9 254 aa6.83□□□□□ -1.32
PTPRD-206ENST00000397617 CLCN1P35523 988 aa6.83□□□□□ -1.32
PTPRD-206ENST00000397617 HLFQ16534 295 aa6.83□□□□□ -1.32
PTPRD-206ENST00000397617 SUSD4Q5VX71 490 aa6.83□□□□□ -1.32
PTPRD-206ENST00000397617 ARL6IP4Q66PJ3 421 aaKnown RBP6.83□□□□□ -1.32
PTPRD-206ENST00000397617 ARHGAP27Q6ZUM4 889 aa6.83□□□□□ -1.32
PTPRD-206ENST00000397617 IQCDQ96DY2 449 aa6.83□□□□□ -1.32
PTPRD-206ENST00000397617 BCL11AQ9H165 835 aa6.83□□□□□ -1.32
PTPRD-206ENST00000397617 BAZ2BQ9UIF8 2168 aaKnown RBP6.82□□□□□ -1.32
PTPRD-206ENST00000397617 GAKO14976 1311 aa6.82□□□□□ -1.32
PTPRD-206ENST00000397617 DEXIO95424 95 aa6.82□□□□□ -1.32
PTPRD-206ENST00000397617 IL1R1P14778 569 aa6.82□□□□□ -1.32
PTPRD-206ENST00000397617 FAM160A1Q05DH4 1040 aa6.82□□□□□ -1.32
PTPRD-206ENST00000397617 BRF1Q92994 677 aa6.82□□□□□ -1.32
PTPRD-206ENST00000397617 SP8Q8IXZ3 490 aa6.82□□□□□ -1.32
PTPRD-206ENST00000397617 FERMT2Q96AC1 680 aa6.82□□□□□ -1.32
PTPRD-206ENST00000397617 LRRC24Q50LG9 513 aa6.82□□□□□ -1.32
PTPRD-206ENST00000397617 SARM1Q6SZW1 724 aa6.82□□□□□ -1.32
PTPRD-206ENST00000397617 MFSD6Q6ZSS7 791 aa6.82□□□□□ -1.32
PTPRD-206ENST00000397617 CCDC148Q8NFR7 591 aa6.82□□□□□ -1.32
PTPRD-206ENST00000397617 RIOK1Q9BRS2 568 aaKnown RBP6.82□□□□□ -1.32
PTPRD-206ENST00000397617 SIL1Q9H173 461 aa6.82□□□□□ -1.32
PTPRD-206ENST00000397617 EHD4Q9H223 541 aa6.82□□□□□ -1.32
PTPRD-206ENST00000397617 FAM13BQ9NYF5 915 aa6.82□□□□□ -1.32
PTPRD-206ENST00000397617 ZBTB43O43298 467 aa6.82□□□□□ -1.32
PTPRD-206ENST00000397617 PDIA3P30101 505 aaKnown RBP6.82□□□□□ -1.32
PTPRD-206ENST00000397617 MINPP1Q9UNW1 487 aa6.82□□□□□ -1.32
PTPRD-206ENST00000397617 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.82□□□□□ -1.32
PTPRD-206ENST00000397617 MYH2Q9UKX2 1941 aa6.82□□□□□ -1.32
PTPRD-206ENST00000397617 PPP6R2O75170 966 aa6.82□□□□□ -1.32
PTPRD-206ENST00000397617 ADAMTS2O95450 1211 aa6.82□□□□□ -1.32
PTPRD-206ENST00000397617 ZSCAN30Q86W11 494 aa6.82□□□□□ -1.32
PTPRD-206ENST00000397617 COA1Q9GZY4 146 aa6.82□□□□□ -1.32
PTPRD-206ENST00000397617 GOLGA6L6A8MZA4 724 aa6.82□□□□□ -1.32
PTPRD-206ENST00000397617 ST5P78524 1137 aa6.82□□□□□ -1.32
PTPRD-206ENST00000397617 SAMD3Q8N6K7 520 aa6.82□□□□□ -1.32
PTPRD-206ENST00000397617 CNKSR1Q969H4 720 aa6.82□□□□□ -1.32
PTPRD-206ENST00000397617 TRIM44Q96DX7 344 aaPredicted RBP6.82□□□□□ -1.32
PTPRD-206ENST00000397617 NAP1L4Q99733 375 aaKnown RBP6.82□□□□□ -1.32
PTPRD-206ENST00000397617 MAP3K11Q16584 847 aa6.81□□□□□ -1.32
PTPRD-206ENST00000397617 SUPT20HQ8NEM7 779 aa6.81□□□□□ -1.32
PTPRD-206ENST00000397617 TMX4Q9H1E5 349 aaPredicted RBP6.81□□□□□ -1.32
PTPRD-206ENST00000397617 TPCN1Q9ULQ1 816 aa6.81□□□□□ -1.32
PTPRD-206ENST00000397617 KINO60870 393 aaKnown RBP6.81□□□□□ -1.32
PTPRD-206ENST00000397617 SLC39A14Q15043 492 aa6.81□□□□□ -1.32
PTPRD-206ENST00000397617 C8orf76Q96K31 380 aa6.81□□□□□ -1.32
PTPRD-206ENST00000397617 MYSM1Q5VVJ2 828 aa6.81□□□□□ -1.32
PTPRD-206ENST00000397617 PPP1R18Q6NYC8 613 aa6.81□□□□□ -1.32
PTPRD-206ENST00000397617 IFNL3Q8IZI9 196 aa6.81□□□□□ -1.32
PTPRD-206ENST00000397617 CUEDC2Q9H467 287 aa6.81□□□□□ -1.32
PTPRD-206ENST00000397617 CMA1P23946 247 aa6.81□□□□□ -1.32
PTPRD-206ENST00000397617 ZNF589Q86UQ0 364 aaPredicted RBP6.81□□□□□ -1.32
PTPRD-206ENST00000397617 STK24Q9Y6E0 443 aa6.81□□□□□ -1.32
PTPRD-206ENST00000397617 SH2B2O14492 632 aaPredicted RBP6.81□□□□□ -1.32
PTPRD-206ENST00000397617 PRC1O43663 620 aa6.81□□□□□ -1.32
PTPRD-206ENST00000397617 HIBADHP31937 336 aaKnown RBP6.81□□□□□ -1.32
PTPRD-206ENST00000397617 CHRNDQ07001 517 aa6.81□□□□□ -1.32
PTPRD-206ENST00000397617 ADCK5Q3MIX3 580 aa6.81□□□□□ -1.32
PTPRD-206ENST00000397617 BRMS1Q9HCU9 246 aa6.81□□□□□ -1.32
PTPRD-206ENST00000397617 MKRN1Q9UHC7 482 aaKnown RBP6.81□□□□□ -1.32
PTPRD-206ENST00000397617 MYH15Q9Y2K3 1946 aa6.81□□□□□ -1.32
PTPRD-206ENST00000397617 TM4SF1P30408 202 aa6.81□□□□□ -1.32
PTPRD-206ENST00000397617 PDE6BP35913 854 aa6.81□□□□□ -1.32
PTPRD-206ENST00000397617 IARSP41252 1262 aaKnown RBP6.81□□□□□ -1.32
PTPRD-206ENST00000397617 TRIM29Q14134 588 aa6.81□□□□□ -1.32
PTPRD-206ENST00000397617 MRFAP1L1Q96HT8 127 aa6.81□□□□□ -1.32
PTPRD-206ENST00000397617 TLR7Q9NYK1 1049 aaKnown RBP6.81□□□□□ -1.32
PTPRD-206ENST00000397617 GPR75-ASB3A0A0A6YYF3 556 aa6.81□□□□□ -1.32
PTPRD-206ENST00000397617 GJB2P29033 226 aa6.81□□□□□ -1.32
PTPRD-206ENST00000397617 HHIPL2Q6UWX4 724 aa6.81□□□□□ -1.32
PTPRD-206ENST00000397617 TTC6Q86TZ1 520 aa6.81□□□□□ -1.32
PTPRD-206ENST00000397617 UBAC1Q9BSL1 405 aa6.81□□□□□ -1.32
PTPRD-206ENST00000397617 IRS2Q9Y4H2 1338 aa6.8□□□□□ -1.32
PTPRD-206ENST00000397617 LTBP1Q14766 1721 aa6.8□□□□□ -1.32
PTPRD-206ENST00000397617 NPR1P16066 1061 aa6.8□□□□□ -1.32
PTPRD-206ENST00000397617 RFC4P35249 363 aa6.8□□□□□ -1.32
PTPRD-206ENST00000397617 DHX36Q9H2U1 1008 aaKnown RBP6.8□□□□□ -1.32
PTPRD-206ENST00000397617 BCL2L12Q9HB09 334 aa6.8□□□□□ -1.32
PTPRD-206ENST00000397617 RESTQ13127 1097 aa6.8□□□□□ -1.32
PTPRD-206ENST00000397617 LRP2BPQ9P2M1 347 aa6.8□□□□□ -1.32
PTPRD-206ENST00000397617 XRCC6P12956 609 aaKnown RBP eCLIP6.8□□□□□ -1.32
PTPRD-206ENST00000397617 PRPHP41219 470 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms