RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 HSP90AA4PQ58FG1 418 aa10.53□□□□□ -0.72
CAPN3-206ENST00000397163 ZNF496Q96IT1 587 aaPredicted RBP10.53□□□□□ -0.72
CAPN3-206ENST00000397163 MPHOSPH8Q99549 860 aa10.53□□□□□ -0.72
CAPN3-206ENST00000397163 ZSWIM4Q9H7M6 989 aa10.53□□□□□ -0.72
CAPN3-206ENST00000397163 ATG3Q9NT62 314 aa10.53□□□□□ -0.72
CAPN3-206ENST00000397163 GEMIN8Q9NWZ8 242 aaKnown RBP10.53□□□□□ -0.72
CAPN3-206ENST00000397163 ABCC6O95255 1503 aa10.53□□□□□ -0.72
CAPN3-206ENST00000397163 VWA3AA6NCI4 1184 aa10.53□□□□□ -0.72
CAPN3-206ENST00000397163 ATP8B1O43520 1251 aa10.53□□□□□ -0.72
CAPN3-206ENST00000397163 TBC1D8O95759 1140 aa10.53□□□□□ -0.72
CAPN3-206ENST00000397163 GCP02774 474 aa10.53□□□□□ -0.72
CAPN3-206ENST00000397163 FKBP4Q02790 459 aaKnown RBP eCLIP10.53□□□□□ -0.72
CAPN3-206ENST00000397163 RALYLQ86SE5 291 aaKnown RBP10.53□□□□□ -0.72
CAPN3-206ENST00000397163 FANCLQ9NW38 375 aa10.53□□□□□ -0.72
CAPN3-206ENST00000397163 PPP2R3AQ06190 1150 aa10.52□□□□□ -0.72
CAPN3-206ENST00000397163 SLC39A14Q15043 492 aa10.52□□□□□ -0.72
CAPN3-206ENST00000397163 CC2D1AQ6P1N0 951 aaPredicted RBP10.52□□□□□ -0.72
CAPN3-206ENST00000397163 FCHSD1Q86WN1 690 aa10.52□□□□□ -0.72
CAPN3-206ENST00000397163 JMYQ8N9B5 988 aa10.52□□□□□ -0.72
CAPN3-206ENST00000397163 BAG1Q99933 345 aaPredicted RBP10.52□□□□□ -0.72
CAPN3-206ENST00000397163 ARFGAP3Q9NP61 516 aa10.52□□□□□ -0.72
CAPN3-206ENST00000397163 MARF1Q9Y4F3 1742 aaKnown RBP10.52□□□□□ -0.72
CAPN3-206ENST00000397163 H3BQF6 201 aa10.52□□□□□ -0.73
CAPN3-206ENST00000397163 CADPS2Q86UW7 1296 aa10.52□□□□□ -0.73
CAPN3-206ENST00000397163 DHX37Q8IY37 1157 aaKnown RBP10.52□□□□□ -0.73
CAPN3-206ENST00000397163 GPR161Q8N6U8 529 aaKnown RBP10.52□□□□□ -0.73
CAPN3-206ENST00000397163 OSBP2Q969R2 916 aa10.52□□□□□ -0.73
CAPN3-206ENST00000397163 WDR24Q96S15 920 aa10.52□□□□□ -0.73
CAPN3-206ENST00000397163 TUBE1Q9UJT0 475 aa10.52□□□□□ -0.73
CAPN3-206ENST00000397163 JRKLQ9Y4A0 524 aa10.52□□□□□ -0.73
CAPN3-206ENST00000397163 OVOS2A0A0G2JMS6 1433 aa10.52□□□□□ -0.73
CAPN3-206ENST00000397163 LMO7Q8WWI1 1683 aa10.52□□□□□ -0.73
CAPN3-206ENST00000397163 TTC31Q49AM3 519 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-206ENST00000397163 ARHGEF25Q86VW2 580 aa10.52□□□□□ -0.73
CAPN3-206ENST00000397163 TTC5Q8N0Z6 440 aa10.52□□□□□ -0.73
CAPN3-206ENST00000397163 CWC15Q9P013 229 aaKnown RBP10.52□□□□□ -0.73
CAPN3-206ENST00000397163 ADAM21Q9UKJ8 722 aa10.52□□□□□ -0.73
CAPN3-206ENST00000397163 HPS5Q9UPZ3 1129 aa10.52□□□□□ -0.73
CAPN3-206ENST00000397163 LTN1O94822 1766 aa10.51□□□□□ -0.73
CAPN3-206ENST00000397163 GOLGA6L9A6NEM1 432 aa10.51□□□□□ -0.73
CAPN3-206ENST00000397163 CNNM3Q8NE01 707 aa10.51□□□□□ -0.73
CAPN3-206ENST00000397163 ALG1Q9BT22 464 aa10.51□□□□□ -0.73
CAPN3-206ENST00000397163 SLC52A2Q9HAB3 445 aa10.51□□□□□ -0.73
CAPN3-206ENST00000397163 VPS18Q9P253 973 aa10.51□□□□□ -0.73
CAPN3-206ENST00000397163 XIRP1Q702N8 1843 aaKnown RBP10.51□□□□□ -0.73
CAPN3-206ENST00000397163 DCCP43146 1447 aa10.51□□□□□ -0.73
CAPN3-206ENST00000397163 SNRPA1P09661 255 aaKnown RBP10.51□□□□□ -0.73
CAPN3-206ENST00000397163 IL15P40933 162 aaPredicted RBP10.51□□□□□ -0.73
CAPN3-206ENST00000397163 SHC4Q6S5L8 630 aa10.51□□□□□ -0.73
CAPN3-206ENST00000397163 ATG9AQ7Z3C6 839 aa10.51□□□□□ -0.73
CAPN3-206ENST00000397163 AIFM3Q96NN9 605 aa10.51□□□□□ -0.73
CAPN3-206ENST00000397163 CLIC6Q96NY7 704 aa10.51□□□□□ -0.73
CAPN3-206ENST00000397163 NFAT5O94916 1531 aa10.51□□□□□ -0.73
CAPN3-206ENST00000397163 LTBP4Q8N2S1 1624 aa10.51□□□□□ -0.73
CAPN3-206ENST00000397163 PSEN1P49768 467 aa10.5□□□□□ -0.73
CAPN3-206ENST00000397163 MAP3K9P80192 1104 aa10.5□□□□□ -0.73
CAPN3-206ENST00000397163 HSP90AB3PQ58FF7 597 aa10.5□□□□□ -0.73
CAPN3-206ENST00000397163 CCDC102BQ68D86 513 aa10.5□□□□□ -0.73
CAPN3-206ENST00000397163 VPS37DQ86XT2 251 aa10.5□□□□□ -0.73
CAPN3-206ENST00000397163 FBXL16Q8N461 479 aa10.5□□□□□ -0.73
CAPN3-206ENST00000397163 NCOA7Q8NI08 942 aa10.5□□□□□ -0.73
CAPN3-206ENST00000397163 RAPGEF4Q8WZA2 1011 aa10.5□□□□□ -0.73
CAPN3-206ENST00000397163 PARD6BQ9BYG5 372 aa10.5□□□□□ -0.73
CAPN3-206ENST00000397163 YY1AP1Q9H869 796 aa10.5□□□□□ -0.73
CAPN3-206ENST00000397163 A0A1B0GUL7 405 aa10.5□□□□□ -0.73
CAPN3-206ENST00000397163 PHACTR2O75167 634 aa10.5□□□□□ -0.73
CAPN3-206ENST00000397163 FGAP02671 866 aa10.5□□□□□ -0.73
CAPN3-206ENST00000397163 ADKP55263 362 aaKnown RBP10.5□□□□□ -0.73
CAPN3-206ENST00000397163 KARSQ15046 597 aaKnown RBP10.5□□□□□ -0.73
CAPN3-206ENST00000397163 LRRC24Q50LG9 513 aa10.5□□□□□ -0.73
CAPN3-206ENST00000397163 CT47A1Q5JQC4 288 aaPredicted RBP10.5□□□□□ -0.73
CAPN3-206ENST00000397163 GOLGA6L1Q8N7Z2 621 aa10.5□□□□□ -0.73
CAPN3-206ENST00000397163 ZNF594Q96JF6 807 aaPredicted RBP10.5□□□□□ -0.73
CAPN3-206ENST00000397163 AK7Q96M32 723 aa10.5□□□□□ -0.73
CAPN3-206ENST00000397163 MYCBPQ99417 103 aaPredicted RBP10.5□□□□□ -0.73
CAPN3-206ENST00000397163 PCDHA5Q9Y5H7 936 aa10.5□□□□□ -0.73
CAPN3-206ENST00000397163 MYH15Q9Y2K3 1946 aa10.5□□□□□ -0.73
CAPN3-206ENST00000397163 MCM6Q14566 821 aa10.5□□□□□ -0.73
CAPN3-206ENST00000397163 TOGARAM2Q6ZUX3 1019 aa10.5□□□□□ -0.73
CAPN3-206ENST00000397163 TMEM139Q8IV31 216 aa10.5□□□□□ -0.73
CAPN3-206ENST00000397163 MB21D2Q8IYB1 491 aaPredicted RBP10.5□□□□□ -0.73
CAPN3-206ENST00000397163 GOLGA5Q8TBA6 731 aa10.5□□□□□ -0.73
CAPN3-206ENST00000397163 GOLGA1Q92805 767 aa10.5□□□□□ -0.73
CAPN3-206ENST00000397163 RNF216Q9NWF9 866 aaPredicted RBP10.5□□□□□ -0.73
CAPN3-206ENST00000397163 HPSEQ9Y251 543 aa10.5□□□□□ -0.73
CAPN3-206ENST00000397163 MRFAP1Q9Y605 127 aa10.5□□□□□ -0.73
CAPN3-206ENST00000397163 RXRAP19793 462 aa10.49□□□□□ -0.73
CAPN3-206ENST00000397163 LONRF3Q496Y0 759 aa10.49□□□□□ -0.73
CAPN3-206ENST00000397163 WWC2Q6AWC2 1192 aa10.49□□□□□ -0.73
CAPN3-206ENST00000397163 CCDC12Q8WUD4 166 aaPredicted RBP10.49□□□□□ -0.73
CAPN3-206ENST00000397163 RABGGTAQ92696 567 aa10.49□□□□□ -0.73
CAPN3-206ENST00000397163 DESI2Q9BSY9 194 aa10.49□□□□□ -0.73
CAPN3-206ENST00000397163 UBXN6Q9BZV1 441 aa10.49□□□□□ -0.73
CAPN3-206ENST00000397163 GPR108Q9NPR9 543 aa10.49□□□□□ -0.73
CAPN3-206ENST00000397163 INTS13Q9NVM9 706 aa10.49□□□□□ -0.73
CAPN3-206ENST00000397163 AXIN2Q9Y2T1 843 aa10.49□□□□□ -0.73
CAPN3-206ENST00000397163 ZNF213O14771 459 aa10.49□□□□□ -0.73
CAPN3-206ENST00000397163 MYO1BO43795 1136 aa10.49□□□□□ -0.73
CAPN3-206ENST00000397163 N4BP1O75113 896 aaKnown RBP10.49□□□□□ -0.73
CAPN3-206ENST00000397163 PPP6R2O75170 966 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms