RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 EVI5LQ96CN4 794 aa13.78□□□□□ -0.2
SMU1-201ENST00000397149 ZNF692Q9BU19 519 aaPredicted RBP13.78□□□□□ -0.2
SMU1-201ENST00000397149 PALM3A6NDB9 673 aaPredicted RBP13.78□□□□□ -0.2
SMU1-201ENST00000397149 TBC1D8O95759 1140 aa13.78□□□□□ -0.2
SMU1-201ENST00000397149 KRT3P12035 628 aa13.78□□□□□ -0.2
SMU1-201ENST00000397149 SESN3P58005 492 aa13.78□□□□□ -0.2
SMU1-201ENST00000397149 RRP36Q96EU6 259 aaKnown RBP13.78□□□□□ -0.2
SMU1-201ENST00000397149 UTP11Q9Y3A2 253 aaKnown RBP13.78□□□□□ -0.2
SMU1-201ENST00000397149 CCDC38Q502W7 563 aa13.78□□□□□ -0.2
SMU1-201ENST00000397149 MUM1L1Q5H9M0 696 aa13.78□□□□□ -0.2
SMU1-201ENST00000397149 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.78□□□□□ -0.2
SMU1-201ENST00000397149 PSMB7Q99436 277 aa13.78□□□□□ -0.2
SMU1-201ENST00000397149 GOLGA6CA6NDK9 693 aa13.77□□□□□ -0.2
SMU1-201ENST00000397149 GOLGA6DP0CG33 693 aa13.77□□□□□ -0.2
SMU1-201ENST00000397149 PPP1R42Q7Z4L9 355 aa13.77□□□□□ -0.2
SMU1-201ENST00000397149 FCHSD1Q86WN1 690 aa13.77□□□□□ -0.2
SMU1-201ENST00000397149 ARFGAP2Q8N6H7 521 aa13.77□□□□□ -0.2
SMU1-201ENST00000397149 EFCC1Q9HA90 598 aa13.77□□□□□ -0.2
SMU1-201ENST00000397149 GOLGA6AQ9NYA3 693 aa13.77□□□□□ -0.2
SMU1-201ENST00000397149 RXRAP19793 462 aa13.77□□□□□ -0.2
SMU1-201ENST00000397149 NOP56O00567 594 aaKnown RBP13.77□□□□□ -0.21
SMU1-201ENST00000397149 GBP5Q96PP8 586 aa13.77□□□□□ -0.21
SMU1-201ENST00000397149 FBXW4P57775 412 aa13.77□□□□□ -0.21
SMU1-201ENST00000397149 UBE2HP62256 183 aa13.77□□□□□ -0.21
SMU1-201ENST00000397149 METTL14Q9HCE5 456 aaKnown RBP13.77□□□□□ -0.21
SMU1-201ENST00000397149 ANKRD30BQ9BXX2 1392 aa13.77□□□□□ -0.21
SMU1-201ENST00000397149 MYCLP12524 364 aaPredicted RBP13.77□□□□□ -0.21
SMU1-201ENST00000397149 NOP14P78316 857 aaKnown RBP13.77□□□□□ -0.21
SMU1-201ENST00000397149 APOEP02649 317 aa13.76□□□□□ -0.21
SMU1-201ENST00000397149 ANKRD42Q8N9B4 389 aa13.76□□□□□ -0.21
SMU1-201ENST00000397149 WIZO95785 1651 aa13.76□□□□□ -0.21
SMU1-201ENST00000397149 TRAF5O00463 557 aa13.76□□□□□ -0.21
SMU1-201ENST00000397149 RNF10Q8N5U6 811 aaKnown RBP13.76□□□□□ -0.21
SMU1-201ENST00000397149 SPDYE1Q8NFV5 336 aaPredicted RBP13.76□□□□□ -0.21
SMU1-201ENST00000397149 ZBBXA8MT70 800 aa13.76□□□□□ -0.21
SMU1-201ENST00000397149 NDUFAB1O14561 156 aa13.76□□□□□ -0.21
SMU1-201ENST00000397149 CAPN12Q6ZSI9 719 aa13.76□□□□□ -0.21
SMU1-201ENST00000397149 CTAGE3PQ8IX95 158 aa13.76□□□□□ -0.21
SMU1-201ENST00000397149 THEMISQ8N1K5 641 aaPredicted RBP13.76□□□□□ -0.21
SMU1-201ENST00000397149 TAB3Q8N5C8 712 aaPredicted RBP13.76□□□□□ -0.21
SMU1-201ENST00000397149 CCDC88BA6NC98 1476 aa13.76□□□□□ -0.21
SMU1-201ENST00000397149 DCUN1D2Q6PH85 259 aa13.76□□□□□ -0.21
SMU1-201ENST00000397149 ESR2Q92731 530 aa13.76□□□□□ -0.21
SMU1-201ENST00000397149 NUB1Q9Y5A7 615 aa13.76□□□□□ -0.21
SMU1-201ENST00000397149 EPB41P11171 864 aaKnown RBP13.76□□□□□ -0.21
SMU1-201ENST00000397149 HMGB2P26583 209 aaKnown RBP13.76□□□□□ -0.21
SMU1-201ENST00000397149 ZSCAN23Q3MJ62 389 aa13.76□□□□□ -0.21
SMU1-201ENST00000397149 LONRF3Q496Y0 759 aa13.76□□□□□ -0.21
SMU1-201ENST00000397149 RNF168Q8IYW5 571 aaPredicted RBP13.76□□□□□ -0.21
SMU1-201ENST00000397149 MED10Q9BTT4 135 aa13.76□□□□□ -0.21
SMU1-201ENST00000397149 MYO1AQ9UBC5 1043 aa13.76□□□□□ -0.21
SMU1-201ENST00000397149 RTEL1-TNFRSF6BF6WH68 1400 aa13.76□□□□□ -0.21
SMU1-201ENST00000397149 SYNDIG1LA6NDD5 238 aa13.75□□□□□ -0.21
SMU1-201ENST00000397149 NOLC1Q14978 699 aaKnown RBP eCLIP13.75□□□□□ -0.21
SMU1-201ENST00000397149 MYLK4Q86YV6 388 aaPredicted RBP13.75□□□□□ -0.21
SMU1-201ENST00000397149 MAPK8IP1Q9UQF2 711 aa13.75□□□□□ -0.21
SMU1-201ENST00000397149 STRN3Q13033 797 aa13.75□□□□□ -0.21
SMU1-201ENST00000397149 MIGA1Q8NAN2 632 aa13.75□□□□□ -0.21
SMU1-201ENST00000397149 ZKSCAN3Q9BRR0 538 aa13.75□□□□□ -0.21
SMU1-201ENST00000397149 KRT23Q9C075 422 aa13.75□□□□□ -0.21
SMU1-201ENST00000397149 SAP30BPQ9UHR5 308 aaKnown RBP13.75□□□□□ -0.21
SMU1-201ENST00000397149 ZRANB2O95218 330 aaKnown RBP eCLIP13.75□□□□□ -0.21
SMU1-201ENST00000397149 CD19P15391 556 aa13.75□□□□□ -0.21
SMU1-201ENST00000397149 VPS37BQ9H9H4 285 aa13.75□□□□□ -0.21
SMU1-201ENST00000397149 SORBS3O60504 671 aa13.75□□□□□ -0.21
SMU1-201ENST00000397149 PDE6AP16499 860 aa13.75□□□□□ -0.21
SMU1-201ENST00000397149 DBN1Q16643 649 aa13.75□□□□□ -0.21
SMU1-201ENST00000397149 MUM1Q2TAK8 710 aa13.75□□□□□ -0.21
SMU1-201ENST00000397149 TRIM56Q9BRZ2 755 aaKnown RBP13.75□□□□□ -0.21
SMU1-201ENST00000397149 FAF1Q9UNN5 650 aaPredicted RBP13.75□□□□□ -0.21
SMU1-201ENST00000397149 EIF6P56537 245 aaKnown RBP13.75□□□□□ -0.21
SMU1-201ENST00000397149 ANKLE2Q86XL3 938 aa13.75□□□□□ -0.21
SMU1-201ENST00000397149 KLHL7Q8IXQ5 586 aa13.75□□□□□ -0.21
SMU1-201ENST00000397149 ZC4H2Q9NQZ6 224 aa13.75□□□□□ -0.21
SMU1-201ENST00000397149 CTNND2Q9UQB3 1225 aa13.75□□□□□ -0.21
SMU1-201ENST00000397149 FNDC3AQ9Y2H6 1198 aaKnown RBP13.75□□□□□ -0.21
SMU1-201ENST00000397149 CCDC93Q567U6 631 aa13.74□□□□□ -0.21
SMU1-201ENST00000397149 LIN9Q5TKA1 542 aa13.74□□□□□ -0.21
SMU1-201ENST00000397149 SLC4A1P02730 911 aa13.74□□□□□ -0.21
SMU1-201ENST00000397149 CNGA1P29973 690 aa13.74□□□□□ -0.21
SMU1-201ENST00000397149 SPAG1Q07617 926 aa13.74□□□□□ -0.21
SMU1-201ENST00000397149 HDAC11Q96DB2 347 aa13.74□□□□□ -0.21
SMU1-201ENST00000397149 GPCPD1Q9NPB8 672 aa13.74□□□□□ -0.21
SMU1-201ENST00000397149 FAM47CQ5HY64 1035 aa13.74□□□□□ -0.21
SMU1-201ENST00000397149 BEND3Q5T5X7 828 aa13.74□□□□□ -0.21
SMU1-201ENST00000397149 RMDN2Q96LZ7 410 aa13.74□□□□□ -0.21
SMU1-201ENST00000397149 NUCKS1Q9H1E3 243 aaKnown RBP13.74□□□□□ -0.21
SMU1-201ENST00000397149 HELLSQ9NRZ9 838 aa13.74□□□□□ -0.21
SMU1-201ENST00000397149 BAIAP2L1Q9UHR4 511 aa13.74□□□□□ -0.21
SMU1-201ENST00000397149 U2AF2P26368 475 aaKnown RBP eCLIP13.74□□□□□ -0.21
SMU1-201ENST00000397149 ANKRD20A3Q5VUR7 823 aa13.74□□□□□ -0.21
SMU1-201ENST00000397149 SETDB2Q96T68 719 aa13.74□□□□□ -0.21
SMU1-201ENST00000397149 NFE2L2Q16236 605 aa13.74□□□□□ -0.21
SMU1-201ENST00000397149 AFAP1L1Q8TED9 768 aa13.74□□□□□ -0.21
SMU1-201ENST00000397149 BRD4O60885 1362 aaPredicted RBP13.74□□□□□ -0.21
SMU1-201ENST00000397149 Q6ZUG5 572 aa13.74□□□□□ -0.21
SMU1-201ENST00000397149 MCUQ8NE86 351 aa13.74□□□□□ -0.21
SMU1-201ENST00000397149 FAM71BQ8TC56 605 aa13.74□□□□□ -0.21
SMU1-201ENST00000397149 JDP2Q8WYK2 163 aa13.74□□□□□ -0.21
SMU1-201ENST00000397149 IFNKQ9P0W0 207 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms