RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 MAGEB6Q8N7X4 407 aa35.68■■■■□ 3.3
CHCHD4-202ENST00000396914 TNFAIP1Q13829 316 aa35.67■■■■□ 3.3
CHCHD4-202ENST00000396914 CDC42EP5Q6NZY7 148 aa35.67■■■■□ 3.3
CHCHD4-202ENST00000396914 CDCA5Q96FF9 252 aa35.67■■■■□ 3.3
CHCHD4-202ENST00000396914 FAM163AQ96GL9 167 aaPredicted RBP35.67■■■■□ 3.3
CHCHD4-202ENST00000396914 DEFB129Q9H1M3 183 aa35.67■■■■□ 3.3
CHCHD4-202ENST00000396914 MAST2Q6P0Q8 1798 aa35.67■■■■□ 3.3
CHCHD4-202ENST00000396914 CYP7A1P22680 504 aa35.66■■■■□ 3.3
CHCHD4-202ENST00000396914 TNNI2P48788 182 aa35.66■■■■□ 3.3
CHCHD4-202ENST00000396914 GLRX3O76003 335 aaKnown RBP35.66■■■■□ 3.3
CHCHD4-202ENST00000396914 IGSF3O75054 1194 aa35.65■■■■□ 3.3
CHCHD4-202ENST00000396914 MAP4K4O95819 1239 aaPredicted RBP35.65■■■■□ 3.3
CHCHD4-202ENST00000396914 TMEM88BA6NKF7 163 aa35.64■■■■□ 3.3
CHCHD4-202ENST00000396914 RASA3Q14644 834 aa35.64■■■■□ 3.3
CHCHD4-202ENST00000396914 SLC9C2Q5TAH2 1124 aa35.64■■■■□ 3.3
CHCHD4-202ENST00000396914 CCDC136Q96JN2 1154 aa35.64■■■■□ 3.3
CHCHD4-202ENST00000396914 GPR75-ASB3A0A0A6YYF3 556 aa35.63■■■■□ 3.29
CHCHD4-202ENST00000396914 PDE1AP54750 535 aa35.63■■■■□ 3.29
CHCHD4-202ENST00000396914 PI4K2BQ8TCG2 481 aa35.63■■■■□ 3.29
CHCHD4-202ENST00000396914 DDX24Q9GZR7 859 aaKnown RBP eCLIP35.63■■■■□ 3.29
CHCHD4-202ENST00000396914 SALL3Q9BXA9 1300 aa35.63■■■■□ 3.29
CHCHD4-202ENST00000396914 DOCK2Q92608 1830 aa35.62■■■■□ 3.29
CHCHD4-202ENST00000396914 BAG3O95817 575 aa35.62■■■■□ 3.29
CHCHD4-202ENST00000396914 AATFQ9NY61 560 aaKnown RBP eCLIP35.62■■■■□ 3.29
CHCHD4-202ENST00000396914 TRPM7Q96QT4 1865 aa35.62■■■■□ 3.29
CHCHD4-202ENST00000396914 NF2P35240 595 aa35.61■■■■□ 3.29
CHCHD4-202ENST00000396914 HTRA3P83110 453 aa35.61■■■■□ 3.29
CHCHD4-202ENST00000396914 STAP2Q9UGK3 403 aa35.61■■■■□ 3.29
CHCHD4-202ENST00000396914 PPP2R3BQ9Y5P8 575 aa35.61■■■■□ 3.29
CHCHD4-202ENST00000396914 CST9Q5W186 159 aa35.6■■■■□ 3.29
CHCHD4-202ENST00000396914 ADGRA1Q86SQ6 560 aa35.6■■■■□ 3.29
CHCHD4-202ENST00000396914 ABT1Q9ULW3 272 aaKnown RBP35.6■■■■□ 3.29
CHCHD4-202ENST00000396914 PDE6AP16499 860 aa35.59■■■■□ 3.29
CHCHD4-202ENST00000396914 TCP10Q12799 353 aa35.58■■■■□ 3.29
CHCHD4-202ENST00000396914 MIGA1Q8NAN2 632 aa35.58■■■■□ 3.29
CHCHD4-202ENST00000396914 CREBZFQ9NS37 354 aa35.58■■■■□ 3.29
CHCHD4-202ENST00000396914 TTLL12Q14166 644 aaPredicted RBP35.57■■■■□ 3.29
CHCHD4-202ENST00000396914 C2orf69Q8N8R5 385 aa35.57■■■■□ 3.29
CHCHD4-202ENST00000396914 TMEM39BQ9GZU3 492 aa35.57■■■■□ 3.29
CHCHD4-202ENST00000396914 ZNF532Q9HCE3 1301 aa35.57■■■■□ 3.28
CHCHD4-202ENST00000396914 NFIAQ12857 509 aa35.57■■■■□ 3.28
CHCHD4-202ENST00000396914 PICALMQ13492 652 aa35.57■■■■□ 3.28
CHCHD4-202ENST00000396914 FKBP1CQ5VVH2 108 aa35.57■■■■□ 3.28
CHCHD4-202ENST00000396914 ZSCAN25Q6NSZ9 544 aa35.57■■■■□ 3.28
CHCHD4-202ENST00000396914 CENPQQ7L2Z9 268 aaPredicted RBP35.57■■■■□ 3.28
CHCHD4-202ENST00000396914 PLCG2P16885 1265 aa35.56■■■■□ 3.28
CHCHD4-202ENST00000396914 TMED8Q6PL24 325 aaPredicted RBP35.56■■■■□ 3.28
CHCHD4-202ENST00000396914 PLEKHM2Q8IWE5 1019 aa35.56■■■■□ 3.28
CHCHD4-202ENST00000396914 TEX11Q8IYF3 940 aa35.56■■■■□ 3.28
CHCHD4-202ENST00000396914 SH3RF3Q8TEJ3 882 aaPredicted RBP35.56■■■■□ 3.28
CHCHD4-202ENST00000396914 GBA2Q9HCG7 927 aaPredicted RBP35.56■■■■□ 3.28
CHCHD4-202ENST00000396914 PRKG1Q13976 671 aa35.55■■■■□ 3.28
CHCHD4-202ENST00000396914 SUPT20HL1Q3ZLR7 823 aa35.55■■■■□ 3.28
CHCHD4-202ENST00000396914 FAM83AQ86UY5 434 aa35.55■■■■□ 3.28
CHCHD4-202ENST00000396914 KBTBD3Q8NAB2 608 aa35.55■■■■□ 3.28
CHCHD4-202ENST00000396914 CNTNAP1P78357 1384 aa35.54■■■■□ 3.28
CHCHD4-202ENST00000396914 RHBDL3P58872 404 aa35.54■■■■□ 3.28
CHCHD4-202ENST00000396914 DYNLL1P63167 89 aaKnown RBP35.54■■■■□ 3.28
CHCHD4-202ENST00000396914 NBPF12Q5TAG4 269 aaPredicted RBP35.54■■■■□ 3.28
CHCHD4-202ENST00000396914 RGS3P49796 1198 aa35.53■■■■□ 3.28
CHCHD4-202ENST00000396914 FSD1Q9BTV5 496 aa35.53■■■■□ 3.28
CHCHD4-202ENST00000396914 FAM198AQ9UFP1 575 aa35.53■■■■□ 3.28
CHCHD4-202ENST00000396914 ADD2P35612 726 aa35.52■■■■□ 3.28
CHCHD4-202ENST00000396914 PPP4CP60510 307 aa35.52■■■■□ 3.28
CHCHD4-202ENST00000396914 FAM151AQ8WW52 585 aa35.52■■■■□ 3.28
CHCHD4-202ENST00000396914 MAGEB6P1A0A0J9YX57 407 aa35.51■■■■□ 3.28
CHCHD4-202ENST00000396914 SLFNL1Q499Z3 407 aa35.51■■■■□ 3.28
CHCHD4-202ENST00000396914 IDI2Q9BXS1 227 aa35.51■■■■□ 3.28
CHCHD4-202ENST00000396914 TRIM6-TRIM34B2RNG4 842 aa35.5■■■■□ 3.27
CHCHD4-202ENST00000396914 WDHD1O75717 1129 aaPredicted RBP35.5■■■■□ 3.27
CHCHD4-202ENST00000396914 PDE4AP27815 886 aa35.5■■■■□ 3.27
CHCHD4-202ENST00000396914 LRRFIP1Q32MZ4 808 aaKnown RBP35.5■■■■□ 3.27
CHCHD4-202ENST00000396914 ZSCAN29Q8IWY8 852 aaPredicted RBP35.5■■■■□ 3.27
CHCHD4-202ENST00000396914 CDAN1Q8IWY9 1227 aa35.5■■■■□ 3.27
CHCHD4-202ENST00000396914 TCRBV5S4A2TA0A5A2 114 aa35.49■■■■□ 3.27
CHCHD4-202ENST00000396914 PAXIP1Q6ZW49 1069 aaPredicted RBP35.49■■■■□ 3.27
CHCHD4-202ENST00000396914 MYH7P12883 1935 aa35.49■■■■□ 3.27
CHCHD4-202ENST00000396914 ENTPD3O75355 529 aa35.49■■■■□ 3.27
CHCHD4-202ENST00000396914 CHGBP05060 677 aa35.49■■■■□ 3.27
CHCHD4-202ENST00000396914 ERICH6BQ5W0A0 696 aa35.49■■■■□ 3.27
CHCHD4-202ENST00000396914 CERS3Q8IU89 383 aa35.49■■■■□ 3.27
CHCHD4-202ENST00000396914 TEPSINQ96N21 525 aa35.49■■■■□ 3.27
CHCHD4-202ENST00000396914 UBE3CQ15386 1083 aa35.48■■■■□ 3.27
CHCHD4-202ENST00000396914 ZFPM1Q8IX07 1006 aa35.48■■■■□ 3.27
CHCHD4-202ENST00000396914 TGFBRAP1Q8WUH2 860 aa35.48■■■■□ 3.27
CHCHD4-202ENST00000396914 RILPL2Q969X0 211 aa35.48■■■■□ 3.27
CHCHD4-202ENST00000396914 EVI5LQ96CN4 794 aa35.48■■■■□ 3.27
CHCHD4-202ENST00000396914 OSBPL3Q9H4L5 887 aa35.48■■■■□ 3.27
CHCHD4-202ENST00000396914 DDX4Q9NQI0 724 aaKnown RBP35.48■■■■□ 3.27
CHCHD4-202ENST00000396914 TLL2Q9Y6L7 1015 aa35.48■■■■□ 3.27
CHCHD4-202ENST00000396914 AK9Q5TCS8 1911 aa35.47■■■■□ 3.27
CHCHD4-202ENST00000396914 PPP1R12BO60237 982 aaPredicted RBP35.47■■■■□ 3.27
CHCHD4-202ENST00000396914 HUNKP57058 714 aa35.47■■■■□ 3.27
CHCHD4-202ENST00000396914 MOB2Q70IA6 237 aa35.47■■■■□ 3.27
CHCHD4-202ENST00000396914 FZD1Q9UP38 647 aa35.47■■■■□ 3.27
CHCHD4-202ENST00000396914 RNF113AO15541 343 aaKnown RBP35.46■■■■□ 3.27
CHCHD4-202ENST00000396914 USP5P45974 858 aa35.46■■■■□ 3.27
CHCHD4-202ENST00000396914 ARMC9Q7Z3E5 817 aa35.46■■■■□ 3.27
CHCHD4-202ENST00000396914 SAPCD2Q86UD0 394 aa35.46■■■■□ 3.27
CHCHD4-202ENST00000396914 MKRN1Q9UHC7 482 aaKnown RBP35.46■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms