RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 LSG1Q9H089 658 aaKnown RBP17.71■□□□□ 0.43
TM9SF1-202ENST00000396854 RNF181Q9P0P0 153 aa17.71■□□□□ 0.43
TM9SF1-202ENST00000396854 F8W031 263 aaPredicted RBP17.7■□□□□ 0.42
TM9SF1-202ENST00000396854 HHIPL2Q6UWX4 724 aa17.7■□□□□ 0.42
TM9SF1-202ENST00000396854 ANO2Q9NQ90 1003 aa17.7■□□□□ 0.42
TM9SF1-202ENST00000396854 ZNF541Q9H0D2 1346 aa17.7■□□□□ 0.42
TM9SF1-202ENST00000396854 MAGEB6P1A0A0J9YX57 407 aa17.7■□□□□ 0.42
TM9SF1-202ENST00000396854 MBD4O95243 580 aa17.7■□□□□ 0.42
TM9SF1-202ENST00000396854 RPS12P25398 132 aaKnown RBP17.7■□□□□ 0.42
TM9SF1-202ENST00000396854 C9orf131Q5VYM1 1079 aa17.7■□□□□ 0.42
TM9SF1-202ENST00000396854 KIAA1211Q6ZU35 1233 aa17.7■□□□□ 0.42
TM9SF1-202ENST00000396854 CERS3Q8IU89 383 aa17.7■□□□□ 0.42
TM9SF1-202ENST00000396854 MIGA1Q8NAN2 632 aa17.7■□□□□ 0.42
TM9SF1-202ENST00000396854 STRBPQ96SI9 672 aaKnown RBP17.7■□□□□ 0.42
TM9SF1-202ENST00000396854 LAMA4Q16363 1823 aa17.69■□□□□ 0.42
TM9SF1-202ENST00000396854 GPR75-ASB3A0A0A6YYF3 556 aa17.69■□□□□ 0.42
TM9SF1-202ENST00000396854 GOLGA6L3A6NEY3 463 aa17.69■□□□□ 0.42
TM9SF1-202ENST00000396854 K7ELQ4 463 aaPredicted RBP17.69■□□□□ 0.42
TM9SF1-202ENST00000396854 PPP4CP60510 307 aa17.69■□□□□ 0.42
TM9SF1-202ENST00000396854 LCORLQ8N3X6 602 aa17.69■□□□□ 0.42
TM9SF1-202ENST00000396854 TEKT1Q969V4 418 aa17.69■□□□□ 0.42
TM9SF1-202ENST00000396854 SERPINA10Q9UK55 444 aa17.69■□□□□ 0.42
TM9SF1-202ENST00000396854 DAGLAQ9Y4D2 1042 aa17.69■□□□□ 0.42
TM9SF1-202ENST00000396854 ZC3H4Q9UPT8 1303 aaKnown RBP17.68■□□□□ 0.42
TM9SF1-202ENST00000396854 MMP14P50281 582 aa17.68■□□□□ 0.42
TM9SF1-202ENST00000396854 RAB3GAP1Q15042 981 aa17.68■□□□□ 0.42
TM9SF1-202ENST00000396854 DSCC1Q9BVC3 393 aa17.68■□□□□ 0.42
TM9SF1-202ENST00000396854 ARMT1Q9H993 441 aa17.68■□□□□ 0.42
TM9SF1-202ENST00000396854 AATFQ9NY61 560 aaKnown RBP eCLIP17.68■□□□□ 0.42
TM9SF1-202ENST00000396854 ZBTB12Q9Y330 459 aaPredicted RBP17.68■□□□□ 0.42
TM9SF1-202ENST00000396854 NAV1Q8NEY1 1877 aa17.68■□□□□ 0.42
TM9SF1-202ENST00000396854 BAG3O95817 575 aa17.68■□□□□ 0.42
TM9SF1-202ENST00000396854 CRKP46108 304 aa17.68■□□□□ 0.42
TM9SF1-202ENST00000396854 SCNN1DP51172 638 aa17.68■□□□□ 0.42
TM9SF1-202ENST00000396854 PTH1RQ03431 593 aa17.68■□□□□ 0.42
TM9SF1-202ENST00000396854 RPAP1Q9BWH6 1393 aaPredicted RBP17.67■□□□□ 0.42
TM9SF1-202ENST00000396854 FOXP2O15409 715 aa17.67■□□□□ 0.42
TM9SF1-202ENST00000396854 CD2BP2O95400 341 aaKnown RBP17.67■□□□□ 0.42
TM9SF1-202ENST00000396854 HSPD1P10809 573 aaKnown RBP17.67■□□□□ 0.42
TM9SF1-202ENST00000396854 GNAT2P19087 354 aa17.67■□□□□ 0.42
TM9SF1-202ENST00000396854 DYNLL1P63167 89 aaKnown RBP17.67■□□□□ 0.42
TM9SF1-202ENST00000396854 VPS53Q5VIR6 699 aa17.67■□□□□ 0.42
TM9SF1-202ENST00000396854 DPF2Q92785 391 aa17.67■□□□□ 0.42
TM9SF1-202ENST00000396854 MAP4K1Q92918 833 aa17.67■□□□□ 0.42
TM9SF1-202ENST00000396854 TNPO1Q92973 898 aaKnown RBP17.67■□□□□ 0.42
TM9SF1-202ENST00000396854 ZDHHC15Q96MV8 337 aa17.67■□□□□ 0.42
TM9SF1-202ENST00000396854 NOL10Q9BSC4 688 aaKnown RBP17.67■□□□□ 0.42
TM9SF1-202ENST00000396854 HDAC9Q9UKV0 1011 aa17.67■□□□□ 0.42
TM9SF1-202ENST00000396854 DDX60LQ5H9U9 1706 aaKnown RBP17.67■□□□□ 0.42
TM9SF1-202ENST00000396854 BAZ2AQ9UIF9 1905 aaKnown RBP17.67■□□□□ 0.42
TM9SF1-202ENST00000396854 BTDP43251 543 aa17.67■□□□□ 0.42
TM9SF1-202ENST00000396854 GPC2Q8N158 579 aa17.67■□□□□ 0.42
TM9SF1-202ENST00000396854 LAMB1P07942 1786 aa17.66■□□□□ 0.42
TM9SF1-202ENST00000396854 USP17L8P0C7I0 530 aa17.66■□□□□ 0.42
TM9SF1-202ENST00000396854 GBP4Q96PP9 640 aa17.66■□□□□ 0.42
TM9SF1-202ENST00000396854 ZMYM6O95789 1325 aa17.66■□□□□ 0.42
TM9SF1-202ENST00000396854 PLCG2P16885 1265 aa17.65■□□□□ 0.42
TM9SF1-202ENST00000396854 OGFOD1Q8N543 542 aa17.65■□□□□ 0.42
TM9SF1-202ENST00000396854 XRCC6P12956 609 aaKnown RBP eCLIP17.65■□□□□ 0.42
TM9SF1-202ENST00000396854 PTMSP20962 102 aa17.65■□□□□ 0.42
TM9SF1-202ENST00000396854 APOBEC3HQ6NTF7 200 aaKnown RBP17.65■□□□□ 0.42
TM9SF1-202ENST00000396854 GJA3Q9Y6H8 435 aa17.65■□□□□ 0.42
TM9SF1-202ENST00000396854 PATL2C9JE40 543 aaKnown RBP17.64■□□□□ 0.41
TM9SF1-202ENST00000396854 GMPSP49915 693 aaPredicted RBP17.64■□□□□ 0.41
TM9SF1-202ENST00000396854 RHBDL3P58872 404 aa17.64■□□□□ 0.41
TM9SF1-202ENST00000396854 ZNF280AP59817 542 aaPredicted RBP17.64■□□□□ 0.41
TM9SF1-202ENST00000396854 RABEP1Q15276 862 aa17.64■□□□□ 0.41
TM9SF1-202ENST00000396854 CFAP100Q494V2 611 aa17.64■□□□□ 0.41
TM9SF1-202ENST00000396854 MTMR14Q8NCE2 650 aa17.64■□□□□ 0.41
TM9SF1-202ENST00000396854 CRNKL1Q9BZJ0 848 aaKnown RBP17.64■□□□□ 0.41
TM9SF1-202ENST00000396854 ISY1Q9ULR0 285 aaKnown RBP17.64■□□□□ 0.41
TM9SF1-202ENST00000396854 SLC4A4Q9Y6R1 1079 aa17.64■□□□□ 0.41
TM9SF1-202ENST00000396854 MYH1P12882 1939 aa17.64■□□□□ 0.41
TM9SF1-202ENST00000396854 GSG1L2A8MUP6 293 aa17.63■□□□□ 0.41
TM9SF1-202ENST00000396854 GZF1Q9H116 711 aaPredicted RBP17.63■□□□□ 0.41
TM9SF1-202ENST00000396854 RBM8AQ9Y5S9 174 aaKnown RBP17.63■□□□□ 0.41
TM9SF1-202ENST00000396854 U3KPZ7 1027 aaPredicted RBP17.63■□□□□ 0.41
TM9SF1-202ENST00000396854 PRKAB2O43741 272 aa17.63■□□□□ 0.41
TM9SF1-202ENST00000396854 HSP90AA1P07900 732 aaKnown RBP17.63■□□□□ 0.41
TM9SF1-202ENST00000396854 HSPA4P34932 840 aa17.63■□□□□ 0.41
TM9SF1-202ENST00000396854 NECTIN1Q15223 517 aa17.63■□□□□ 0.41
TM9SF1-202ENST00000396854 ALX1Q15699 326 aa17.63■□□□□ 0.41
TM9SF1-202ENST00000396854 SH3RF3Q8TEJ3 882 aaPredicted RBP17.63■□□□□ 0.41
TM9SF1-202ENST00000396854 GIMAP6Q6P9H5 292 aa17.62■□□□□ 0.41
TM9SF1-202ENST00000396854 SDR42E1Q8WUS8 393 aa17.62■□□□□ 0.41
TM9SF1-202ENST00000396854 ZBED3Q96IU2 234 aaPredicted RBP17.62■□□□□ 0.41
TM9SF1-202ENST00000396854 EPB41L4AQ9HCS5 686 aaPredicted RBP17.62■□□□□ 0.41
TM9SF1-202ENST00000396854 ATP8A2Q9NTI2 1148 aa17.62■□□□□ 0.41
TM9SF1-202ENST00000396854 PCDHAC2Q9Y5I4 1007 aa17.62■□□□□ 0.41
TM9SF1-202ENST00000396854 SPDYE2BA6NHP3 402 aa17.62■□□□□ 0.41
TM9SF1-202ENST00000396854 SPDYE6P0CI01 402 aa17.62■□□□□ 0.41
TM9SF1-202ENST00000396854 MCCP23508 829 aa17.62■□□□□ 0.41
TM9SF1-202ENST00000396854 RBM5P52756 815 aaKnown RBP eCLIP17.62■□□□□ 0.41
TM9SF1-202ENST00000396854 IFNL3Q8IZI9 196 aa17.62■□□□□ 0.41
TM9SF1-202ENST00000396854 IL17RAQ96F46 866 aa17.62■□□□□ 0.41
TM9SF1-202ENST00000396854 FGAP02671 866 aa17.61■□□□□ 0.41
TM9SF1-202ENST00000396854 MRE11P49959 708 aa17.61■□□□□ 0.41
TM9SF1-202ENST00000396854 SKOR2Q2VWA4 1001 aaPredicted RBP17.61■□□□□ 0.41
TM9SF1-202ENST00000396854 CDC42EP5Q6NZY7 148 aa17.61■□□□□ 0.41
TM9SF1-202ENST00000396854 CLEC17AQ6ZS10 378 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms