RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 CCDC141Q6ZP82 1450 aa11.52□□□□□ -0.57
COL4A4-201ENST00000396625 PTPRCP08575 1304 aa11.52□□□□□ -0.57
COL4A4-201ENST00000396625 PRIM1P49642 420 aaKnown RBP11.52□□□□□ -0.57
COL4A4-201ENST00000396625 TUBB2AQ13885 445 aa11.52□□□□□ -0.57
COL4A4-201ENST00000396625 ELF2Q15723 593 aa11.52□□□□□ -0.57
COL4A4-201ENST00000396625 TSHZ3Q63HK5 1081 aa11.52□□□□□ -0.57
COL4A4-201ENST00000396625 TUBB2BQ9BVA1 445 aa11.52□□□□□ -0.57
COL4A4-201ENST00000396625 PRDM11Q9NQV5 511 aa11.52□□□□□ -0.57
COL4A4-201ENST00000396625 NUTM2BA6NNL0 878 aaPredicted RBP11.51□□□□□ -0.57
COL4A4-201ENST00000396625 NUTM2EB1AL46 878 aaPredicted RBP11.51□□□□□ -0.57
COL4A4-201ENST00000396625 SLC8A3P57103 927 aa11.51□□□□□ -0.57
COL4A4-201ENST00000396625 NUTM2AQ8IVF1 878 aaPredicted RBP11.51□□□□□ -0.57
COL4A4-201ENST00000396625 DACT1Q9NYF0 836 aa11.51□□□□□ -0.57
COL4A4-201ENST00000396625 DNM1Q05193 864 aaKnown RBP11.51□□□□□ -0.57
COL4A4-201ENST00000396625 LIN9Q5TKA1 542 aa11.51□□□□□ -0.57
COL4A4-201ENST00000396625 CROCCP2Q86T23 111 aa11.51□□□□□ -0.57
COL4A4-201ENST00000396625 SPATS2LQ9NUQ6 558 aaKnown RBP11.51□□□□□ -0.57
COL4A4-201ENST00000396625 RPS6KA2Q15349 733 aa11.51□□□□□ -0.57
COL4A4-201ENST00000396625 CABP1Q9NZU7 370 aa11.51□□□□□ -0.57
COL4A4-201ENST00000396625 RNF8O76064 485 aa11.51□□□□□ -0.57
COL4A4-201ENST00000396625 SYNRGQ9UMZ2 1314 aa11.51□□□□□ -0.57
COL4A4-201ENST00000396625 SPTLC2O15270 562 aa11.51□□□□□ -0.57
COL4A4-201ENST00000396625 ANKRD20A3Q5VUR7 823 aa11.51□□□□□ -0.57
COL4A4-201ENST00000396625 SSH1Q8WYL5 1049 aa11.51□□□□□ -0.57
COL4A4-201ENST00000396625 TRIM31Q9BZY9 425 aa11.51□□□□□ -0.57
COL4A4-201ENST00000396625 ASIC3Q9UHC3 531 aa11.51□□□□□ -0.57
COL4A4-201ENST00000396625 DAPK3O43293 454 aa11.51□□□□□ -0.57
COL4A4-201ENST00000396625 SYF2O95926 243 aaKnown RBP11.51□□□□□ -0.57
COL4A4-201ENST00000396625 SERPINB6P35237 376 aa11.51□□□□□ -0.57
COL4A4-201ENST00000396625 SLFN5Q08AF3 891 aa11.51□□□□□ -0.57
COL4A4-201ENST00000396625 ABCC11Q96J66 1382 aa11.51□□□□□ -0.57
COL4A4-201ENST00000396625 APOEP02649 317 aa11.51□□□□□ -0.57
COL4A4-201ENST00000396625 RBSNQ9H1K0 784 aa11.51□□□□□ -0.57
COL4A4-201ENST00000396625 ECHDC1Q9NTX5 307 aa11.51□□□□□ -0.57
COL4A4-201ENST00000396625 CAPN7Q9Y6W3 813 aa11.51□□□□□ -0.57
COL4A4-201ENST00000396625 KIAA1107Q9UPP5 1409 aa11.51□□□□□ -0.57
COL4A4-201ENST00000396625 ARAP1Q96P48 1450 aa11.51□□□□□ -0.57
COL4A4-201ENST00000396625 PALM3A6NDB9 673 aaPredicted RBP11.51□□□□□ -0.57
COL4A4-201ENST00000396625 ZNF644Q9H582 1327 aaPredicted RBP11.5□□□□□ -0.57
COL4A4-201ENST00000396625 ATP6V1AP38606 617 aa11.5□□□□□ -0.57
COL4A4-201ENST00000396625 RNF34Q969K3 372 aa11.5□□□□□ -0.57
COL4A4-201ENST00000396625 SYNJ2O15056 1496 aa11.5□□□□□ -0.57
COL4A4-201ENST00000396625 KAT6AQ92794 2004 aa11.5□□□□□ -0.57
COL4A4-201ENST00000396625 OAS2P29728 719 aaKnown RBP11.5□□□□□ -0.57
COL4A4-201ENST00000396625 TRIM14Q14142 442 aa11.5□□□□□ -0.57
COL4A4-201ENST00000396625 VWA3BQ502W6 1294 aa11.5□□□□□ -0.57
COL4A4-201ENST00000396625 CC2D2AQ9P2K1 1620 aa11.5□□□□□ -0.57
COL4A4-201ENST00000396625 ATAD2Q6PL18 1390 aa11.5□□□□□ -0.57
COL4A4-201ENST00000396625 KRT15P19012 456 aa11.5□□□□□ -0.57
COL4A4-201ENST00000396625 TMX3Q96JJ7 454 aa11.5□□□□□ -0.57
COL4A4-201ENST00000396625 SCHIP1Q9P0W5 487 aaPredicted RBP11.5□□□□□ -0.57
COL4A4-201ENST00000396625 LGSNQ5TDP6 509 aa11.5□□□□□ -0.57
COL4A4-201ENST00000396625 NECAB1Q8N987 351 aa11.5□□□□□ -0.57
COL4A4-201ENST00000396625 TRIM75PA6NK02 468 aa11.5□□□□□ -0.57
COL4A4-201ENST00000396625 TRMT112Q9UI30 125 aaKnown RBP11.5□□□□□ -0.57
COL4A4-201ENST00000396625 BAG2O95816 211 aa11.5□□□□□ -0.57
COL4A4-201ENST00000396625 TMED1Q13445 227 aa11.5□□□□□ -0.57
COL4A4-201ENST00000396625 SNCBQ16143 134 aa11.5□□□□□ -0.57
COL4A4-201ENST00000396625 PLCB4Q15147 1175 aa11.5□□□□□ -0.57
COL4A4-201ENST00000396625 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.5□□□□□ -0.57
COL4A4-201ENST00000396625 F13A1P00488 732 aa11.5□□□□□ -0.57
COL4A4-201ENST00000396625 STX17P56962 302 aa11.5□□□□□ -0.57
COL4A4-201ENST00000396625 ZNF692Q9BU19 519 aaPredicted RBP11.5□□□□□ -0.57
COL4A4-201ENST00000396625 RLBP1P12271 317 aa11.49□□□□□ -0.57
COL4A4-201ENST00000396625 SF3A3Q12874 501 aaKnown RBP eCLIP11.49□□□□□ -0.57
COL4A4-201ENST00000396625 NXNQ6DKJ4 435 aa11.49□□□□□ -0.57
COL4A4-201ENST00000396625 EIF2AQ9BY44 585 aaKnown RBP11.49□□□□□ -0.57
COL4A4-201ENST00000396625 LARSQ9P2J5 1176 aaKnown RBP11.49□□□□□ -0.57
COL4A4-201ENST00000396625 PTCD1O75127 700 aaKnown RBP11.49□□□□□ -0.57
COL4A4-201ENST00000396625 PAK2Q13177 524 aa11.49□□□□□ -0.57
COL4A4-201ENST00000396625 CCDC125Q86Z20 511 aa11.49□□□□□ -0.57
COL4A4-201ENST00000396625 ESR2Q92731 530 aa11.49□□□□□ -0.57
COL4A4-201ENST00000396625 LRRC2Q9BYS8 371 aa11.49□□□□□ -0.57
COL4A4-201ENST00000396625 SYNJ1O43426 1573 aa11.49□□□□□ -0.57
COL4A4-201ENST00000396625 RPL13P26373 211 aaKnown RBP11.49□□□□□ -0.57
COL4A4-201ENST00000396625 RAP1GDS1P52306 607 aa11.49□□□□□ -0.57
COL4A4-201ENST00000396625 Q6ZUG5 572 aa11.49□□□□□ -0.57
COL4A4-201ENST00000396625 DRC3Q9H069 523 aa11.49□□□□□ -0.57
COL4A4-201ENST00000396625 IGSF22Q8N9C0 903 aa11.49□□□□□ -0.57
COL4A4-201ENST00000396625 PTPN23Q9H3S7 1636 aa11.49□□□□□ -0.57
COL4A4-201ENST00000396625 ATAD2BQ9ULI0 1458 aa11.49□□□□□ -0.57
COL4A4-201ENST00000396625 CALML3P27482 149 aa11.49□□□□□ -0.57
COL4A4-201ENST00000396625 ABTB1Q969K4 478 aaPredicted RBP11.49□□□□□ -0.57
COL4A4-201ENST00000396625 BAG5Q9UL15 447 aa11.49□□□□□ -0.57
COL4A4-201ENST00000396625 CCDC93Q567U6 631 aa11.49□□□□□ -0.57
COL4A4-201ENST00000396625 C9orf84Q5VXU9 1444 aa11.49□□□□□ -0.57
COL4A4-201ENST00000396625 CDR2Q01850 454 aa11.48□□□□□ -0.57
COL4A4-201ENST00000396625 TMTC2Q8N394 836 aa11.48□□□□□ -0.57
COL4A4-201ENST00000396625 KLHDC4Q8TBB5 520 aa11.48□□□□□ -0.57
COL4A4-201ENST00000396625 SLC12A5Q9H2X9 1139 aa11.48□□□□□ -0.57
COL4A4-201ENST00000396625 TROVE2P10155 538 aaKnown RBP eCLIP11.48□□□□□ -0.57
COL4A4-201ENST00000396625 LRRD1A4D1F6 860 aa11.48□□□□□ -0.57
COL4A4-201ENST00000396625 BIRC3Q13489 604 aa11.48□□□□□ -0.57
COL4A4-201ENST00000396625 TTF2Q9UNY4 1162 aaKnown RBP11.48□□□□□ -0.57
COL4A4-201ENST00000396625 ELP1O95163 1332 aa11.48□□□□□ -0.57
COL4A4-201ENST00000396625 RARSP54136 660 aaKnown RBP11.48□□□□□ -0.57
COL4A4-201ENST00000396625 SLC12A2P55011 1212 aa11.48□□□□□ -0.57
COL4A4-201ENST00000396625 HSP90AA5PQ58FG0 334 aa11.48□□□□□ -0.57
COL4A4-201ENST00000396625 RRP36Q96EU6 259 aaKnown RBP11.48□□□□□ -0.57
COL4A4-201ENST00000396625 RAD51AP2Q09MP3 1159 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms