RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 HP1BP3Q5SSJ5 553 aaPredicted RBP7.09□□□□□ -1.27
CMC1-202ENST00000396610 NUTM2GQ5VZR2 741 aa7.09□□□□□ -1.27
CMC1-202ENST00000396610 ANKRD34AQ69YU3 496 aa7.09□□□□□ -1.27
CMC1-202ENST00000396610 TTBK2Q6IQ55 1244 aa7.09□□□□□ -1.27
CMC1-202ENST00000396610 LLGL2Q6P1M3 1020 aa7.09□□□□□ -1.27
CMC1-202ENST00000396610 MPRIPQ6WCQ1 1025 aa7.09□□□□□ -1.27
CMC1-202ENST00000396610 WDR89Q96FK6 387 aaPredicted RBP7.09□□□□□ -1.27
CMC1-202ENST00000396610 WDR18Q9BV38 432 aa7.09□□□□□ -1.27
CMC1-202ENST00000396610 CEP41Q9BYV8 373 aa7.09□□□□□ -1.27
CMC1-202ENST00000396610 SEMA6BQ9H3T3 888 aa7.09□□□□□ -1.27
CMC1-202ENST00000396610 TPSG1Q9NRR2 321 aa7.09□□□□□ -1.27
CMC1-202ENST00000396610 SAMM50Q9Y512 469 aa7.09□□□□□ -1.27
CMC1-202ENST00000396610 TIAF1O95411 115 aa7.08□□□□□ -1.28
CMC1-202ENST00000396610 ADH5P11766 374 aa7.08□□□□□ -1.28
CMC1-202ENST00000396610 LIG3P49916 1009 aa7.08□□□□□ -1.28
CMC1-202ENST00000396610 DOC2BQ14184 412 aa7.08□□□□□ -1.28
CMC1-202ENST00000396610 AKAP4Q5JQC9 854 aa7.08□□□□□ -1.28
CMC1-202ENST00000396610 EXOSC6Q5RKV6 272 aaKnown RBP7.08□□□□□ -1.28
CMC1-202ENST00000396610 DZIP1LQ8IYY4 767 aaKnown RBP7.08□□□□□ -1.28
CMC1-202ENST00000396610 SMG8Q8ND04 991 aaKnown RBP7.08□□□□□ -1.28
CMC1-202ENST00000396610 NOC4LQ9BVI4 516 aaKnown RBP7.08□□□□□ -1.28
CMC1-202ENST00000396610 EMILIN2Q9BXX0 1053 aa7.08□□□□□ -1.28
CMC1-202ENST00000396610 SUGCTQ9HAC7 445 aa7.08□□□□□ -1.28
CMC1-202ENST00000396610 KRT82Q9NSB4 513 aa7.08□□□□□ -1.28
CMC1-202ENST00000396610 AOC2O75106 756 aa7.07□□□□□ -1.28
CMC1-202ENST00000396610 DRD2P14416 443 aa7.07□□□□□ -1.28
CMC1-202ENST00000396610 VAMP1P23763 118 aa7.07□□□□□ -1.28
CMC1-202ENST00000396610 GPBAR1Q8TDU6 330 aa7.07□□□□□ -1.28
CMC1-202ENST00000396610 GAL3ST3Q96A11 431 aa7.07□□□□□ -1.28
CMC1-202ENST00000396610 TP53INP1Q96A56 240 aa7.07□□□□□ -1.28
CMC1-202ENST00000396610 FAM46AQ96IP4 442 aaKnown RBP7.07□□□□□ -1.28
CMC1-202ENST00000396610 BACH2Q9BYV9 841 aa7.07□□□□□ -1.28
CMC1-202ENST00000396610 CYP4F12Q9HCS2 524 aa7.07□□□□□ -1.28
CMC1-202ENST00000396610 AP4E1Q9UPM8 1137 aa7.07□□□□□ -1.28
CMC1-202ENST00000396610 RBM25P49756 843 aaKnown RBP7.06□□□□□ -1.28
CMC1-202ENST00000396610 KIF4BQ2VIQ3 1234 aa7.06□□□□□ -1.28
CMC1-202ENST00000396610 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.06□□□□□ -1.28
CMC1-202ENST00000396610 ARMC10Q8N2F6 343 aa7.06□□□□□ -1.28
CMC1-202ENST00000396610 C12orf50Q8NA57 414 aaPredicted RBP7.06□□□□□ -1.28
CMC1-202ENST00000396610 TMEM87AQ8NBN3 555 aa7.06□□□□□ -1.28
CMC1-202ENST00000396610 UTP4Q969X6 686 aaKnown RBP7.06□□□□□ -1.28
CMC1-202ENST00000396610 ACSBG1Q96GR2 724 aa7.06□□□□□ -1.28
CMC1-202ENST00000396610 RAD18Q9NS91 495 aa7.06□□□□□ -1.28
CMC1-202ENST00000396610 TLR6Q9Y2C9 796 aa7.06□□□□□ -1.28
CMC1-202ENST00000396610 TMPRSS2O15393 492 aa7.05□□□□□ -1.28
CMC1-202ENST00000396610 SART1O43290 800 aaKnown RBP7.05□□□□□ -1.28
CMC1-202ENST00000396610 GAS2O43903 313 aaKnown RBP7.05□□□□□ -1.28
CMC1-202ENST00000396610 TRIM37O94972 964 aa7.05□□□□□ -1.28
CMC1-202ENST00000396610 SOX4Q06945 474 aaPredicted RBP7.05□□□□□ -1.28
CMC1-202ENST00000396610 SEPT6Q14141 434 aa7.05□□□□□ -1.28
CMC1-202ENST00000396610 LRRC14Q15048 493 aa7.05□□□□□ -1.28
CMC1-202ENST00000396610 ZMYM1Q5SVZ6 1142 aa7.05□□□□□ -1.28
CMC1-202ENST00000396610 C2CD4AQ8NCU7 369 aaPredicted RBP7.05□□□□□ -1.28
CMC1-202ENST00000396610 KRTAP4-8Q9BYQ9 185 aa7.05□□□□□ -1.28
CMC1-202ENST00000396610 CACNA2D2Q9NY47 1150 aa7.05□□□□□ -1.28
CMC1-202ENST00000396610 PPP1R9AQ9ULJ8 1098 aa7.05□□□□□ -1.28
CMC1-202ENST00000396610 PCDHB5Q9Y5E4 795 aa7.05□□□□□ -1.28
CMC1-202ENST00000396610 PCDHGC5Q9Y5F6 944 aa7.05□□□□□ -1.28
CMC1-202ENST00000396610 TFE3P19532 575 aaPredicted RBP7.04□□□□□ -1.28
CMC1-202ENST00000396610 RPS26P62854 115 aaKnown RBP7.04□□□□□ -1.28
CMC1-202ENST00000396610 FANCCQ00597 558 aa7.04□□□□□ -1.28
CMC1-202ENST00000396610 PTPN11Q06124 597 aaPredicted RBP7.04□□□□□ -1.28
CMC1-202ENST00000396610 UVSSAQ2YD98 709 aa7.04□□□□□ -1.28
CMC1-202ENST00000396610 AGMOQ6ZNB7 445 aa7.04□□□□□ -1.28
CMC1-202ENST00000396610 ERMP1Q7Z2K6 904 aa7.04□□□□□ -1.28
CMC1-202ENST00000396610 PHC3Q8NDX5 983 aa7.04□□□□□ -1.28
CMC1-202ENST00000396610 MYRFLQ96LU7 910 aa7.04□□□□□ -1.28
CMC1-202ENST00000396610 COPRSQ9NQ92 184 aa7.04□□□□□ -1.28
CMC1-202ENST00000396610 KBTBD4Q9NVX7 518 aa7.04□□□□□ -1.28
CMC1-202ENST00000396610 CYP8B1Q9UNU6 501 aa7.04□□□□□ -1.28
CMC1-202ENST00000396610 ACTL7BQ9Y614 415 aa7.04□□□□□ -1.28
CMC1-202ENST00000396610 ITGB7P26010 798 aa7.03□□□□□ -1.28
CMC1-202ENST00000396610 ZNF76P36508 570 aa7.03□□□□□ -1.28
CMC1-202ENST00000396610 HNRNPUQ00839 825 aaKnown RBP eCLIP7.03□□□□□ -1.28
CMC1-202ENST00000396610 ID3Q02535 119 aa7.03□□□□□ -1.28
CMC1-202ENST00000396610 SGO2Q562F6 1265 aa7.03□□□□□ -1.28
CMC1-202ENST00000396610 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.03□□□□□ -1.28
CMC1-202ENST00000396610 RHOVQ96L33 236 aa7.03□□□□□ -1.28
CMC1-202ENST00000396610 PSMG3-AS1Q96PY0 264 aa7.03□□□□□ -1.28
CMC1-202ENST00000396610 GGT7Q9UJ14 662 aa7.03□□□□□ -1.28
CMC1-202ENST00000396610 RLBP1P12271 317 aa7.02□□□□□ -1.29
CMC1-202ENST00000396610 LMNB1P20700 586 aa7.02□□□□□ -1.29
CMC1-202ENST00000396610 RSPO4Q2I0M5 234 aaPredicted RBP7.02□□□□□ -1.29
CMC1-202ENST00000396610 HS2ST1Q7LGA3 356 aa7.02□□□□□ -1.29
CMC1-202ENST00000396610 DYMQ7RTS9 669 aa7.02□□□□□ -1.29
CMC1-202ENST00000396610 FAM105AQ9NUU6 356 aa7.02□□□□□ -1.29
CMC1-202ENST00000396610 PCDHA4Q9UN74 947 aa7.02□□□□□ -1.29
CMC1-202ENST00000396610 SYNGAP1Q96PV0 1343 aa7.01□□□□□ -1.29
CMC1-202ENST00000396610 DHX15O43143 795 aaKnown RBP7.01□□□□□ -1.29
CMC1-202ENST00000396610 BMP3P12645 472 aa7.01□□□□□ -1.29
CMC1-202ENST00000396610 RAB6AP20340 208 aa7.01□□□□□ -1.29
CMC1-202ENST00000396610 GBP2P32456 591 aaPredicted RBP7.01□□□□□ -1.29
CMC1-202ENST00000396610 NKAPLQ5M9Q1 402 aa7.01□□□□□ -1.29
CMC1-202ENST00000396610 CDPF1Q6NVV7 123 aa7.01□□□□□ -1.29
CMC1-202ENST00000396610 FAM20CQ8IXL6 584 aa7.01□□□□□ -1.29
CMC1-202ENST00000396610 TMEM74Q96NL1 305 aa7.01□□□□□ -1.29
CMC1-202ENST00000396610 RSRP1Q9BUV0 290 aa7.01□□□□□ -1.29
CMC1-202ENST00000396610 MIR1-1HGQ9H1L0 117 aa7.01□□□□□ -1.29
CMC1-202ENST00000396610 CRIM1Q9NZV1 1036 aa7.01□□□□□ -1.29
CMC1-202ENST00000396610 HIF3AQ9Y2N7 669 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms