RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 NBPF9Q3BBW0 867 aa25.69■■□□□ 1.7
FXN-202ENST00000396364 BMP2KLQ5H9B9 411 aa25.69■■□□□ 1.7
FXN-202ENST00000396364 APOBEC3FQ8IUX4 373 aaKnown RBP25.69■■□□□ 1.7
FXN-202ENST00000396364 ADAMTSL1Q8N6G6 1762 aa25.69■■□□□ 1.7
FXN-202ENST00000396364 EGFRP00533 1210 aa25.68■■□□□ 1.7
FXN-202ENST00000396364 GSPT1P15170 499 aaKnown RBP25.68■■□□□ 1.7
FXN-202ENST00000396364 TNNI2P48788 182 aa25.68■■□□□ 1.7
FXN-202ENST00000396364 APOBEC3HQ6NTF7 200 aaKnown RBP25.68■■□□□ 1.7
FXN-202ENST00000396364 APPBP2Q92624 585 aa25.68■■□□□ 1.7
FXN-202ENST00000396364 MAGEB6P1A0A0J9YX57 407 aa25.67■■□□□ 1.7
FXN-202ENST00000396364 SDSP20132 328 aa25.67■■□□□ 1.7
FXN-202ENST00000396364 HIRAP54198 1017 aaPredicted RBP25.67■■□□□ 1.7
FXN-202ENST00000396364 PPP4CP60510 307 aa25.67■■□□□ 1.7
FXN-202ENST00000396364 ZNF384Q8TF68 577 aa25.67■■□□□ 1.7
FXN-202ENST00000396364 TDRD3Q9H7E2 651 aaKnown RBP25.67■■□□□ 1.7
FXN-202ENST00000396364 DIAPH3Q9NSV4 1193 aa25.67■■□□□ 1.7
FXN-202ENST00000396364 USP40Q9NVE5 1235 aa25.67■■□□□ 1.7
FXN-202ENST00000396364 AATFQ9NY61 560 aaKnown RBP eCLIP25.67■■□□□ 1.7
FXN-202ENST00000396364 GGA3Q9NZ52 723 aa25.67■■□□□ 1.7
FXN-202ENST00000396364 TCRBV5S4A2TA0A5A2 114 aa25.66■■□□□ 1.7
FXN-202ENST00000396364 SPDYE2Q495Y8 402 aa25.66■■□□□ 1.7
FXN-202ENST00000396364 ANGEL2Q5VTE6 544 aaKnown RBP25.66■■□□□ 1.7
FXN-202ENST00000396364 SULF1Q8IWU6 871 aa25.66■■□□□ 1.7
FXN-202ENST00000396364 AIDAQ96BJ3 306 aa25.66■■□□□ 1.7
FXN-202ENST00000396364 VEZTQ9HBM0 779 aa25.66■■□□□ 1.7
FXN-202ENST00000396364 ZNF70Q9UC06 446 aaPredicted RBP25.66■■□□□ 1.7
FXN-202ENST00000396364 PGAP2Q9UHJ9 254 aa25.66■■□□□ 1.7
FXN-202ENST00000396364 KIF3CO14782 793 aa25.65■■□□□ 1.7
FXN-202ENST00000396364 TOMM70O94826 608 aa25.65■■□□□ 1.7
FXN-202ENST00000396364 FKBP1CQ5VVH2 108 aa25.65■■□□□ 1.7
FXN-202ENST00000396364 CDC42EP5Q6NZY7 148 aa25.65■■□□□ 1.7
FXN-202ENST00000396364 CLRN2A0PK11 232 aa25.64■■□□□ 1.7
FXN-202ENST00000396364 CHADLQ6NUI6 762 aa25.64■■□□□ 1.7
FXN-202ENST00000396364 CASC1Q6TDU7 716 aa25.64■■□□□ 1.7
FXN-202ENST00000396364 SKAP1Q86WV1 359 aa25.64■■□□□ 1.7
FXN-202ENST00000396364 MIGA1Q8NAN2 632 aa25.64■■□□□ 1.7
FXN-202ENST00000396364 PCDHAC2Q9Y5I4 1007 aa25.64■■□□□ 1.7
FXN-202ENST00000396364 MFAP1P55081 439 aaKnown RBP25.63■■□□□ 1.69
FXN-202ENST00000396364 CDC37L1Q7L3B6 337 aa25.63■■□□□ 1.69
FXN-202ENST00000396364 ADGRA1Q86SQ6 560 aa25.63■■□□□ 1.69
FXN-202ENST00000396364 TEX11Q8IYF3 940 aa25.63■■□□□ 1.69
FXN-202ENST00000396364 SMC1BQ8NDV3 1235 aa25.63■■□□□ 1.69
FXN-202ENST00000396364 RUFY2Q8WXA3 655 aa25.63■■□□□ 1.69
FXN-202ENST00000396364 CRNKL1Q9BZJ0 848 aaKnown RBP25.63■■□□□ 1.69
FXN-202ENST00000396364 HELLSQ9NRZ9 838 aa25.63■■□□□ 1.69
FXN-202ENST00000396364 PPP2R3BQ9Y5P8 575 aa25.63■■□□□ 1.69
FXN-202ENST00000396364 ZMYM1Q5SVZ6 1142 aa25.62■■□□□ 1.69
FXN-202ENST00000396364 RBM46Q8TBY0 533 aaKnown RBP25.62■■□□□ 1.69
FXN-202ENST00000396364 DDRGK1Q96HY6 314 aa25.62■■□□□ 1.69
FXN-202ENST00000396364 GNAT2P19087 354 aa25.61■■□□□ 1.69
FXN-202ENST00000396364 FAM83AQ86UY5 434 aa25.61■■□□□ 1.69
FXN-202ENST00000396364 MBD4O95243 580 aa25.6■■□□□ 1.69
FXN-202ENST00000396364 USP5P45974 858 aa25.6■■□□□ 1.69
FXN-202ENST00000396364 KRT26Q7Z3Y9 468 aa25.6■■□□□ 1.69
FXN-202ENST00000396364 SH3RF3Q8TEJ3 882 aaPredicted RBP25.6■■□□□ 1.69
FXN-202ENST00000396364 RIOK1Q9BRS2 568 aaKnown RBP25.6■■□□□ 1.69
FXN-202ENST00000396364 IDI2Q9BXS1 227 aa25.6■■□□□ 1.69
FXN-202ENST00000396364 ENTPD3O75355 529 aa25.59■■□□□ 1.69
FXN-202ENST00000396364 NPM3O75607 178 aaKnown RBP25.59■■□□□ 1.69
FXN-202ENST00000396364 POTEIP0CG38 1075 aa25.59■■□□□ 1.69
FXN-202ENST00000396364 POTEJP0CG39 1038 aa25.59■■□□□ 1.69
FXN-202ENST00000396364 RHBDL3P58872 404 aa25.59■■□□□ 1.69
FXN-202ENST00000396364 MCMDC2Q4G0Z9 681 aa25.59■■□□□ 1.69
FXN-202ENST00000396364 PUS7LQ9H0K6 701 aaKnown RBP25.59■■□□□ 1.69
FXN-202ENST00000396364 TCP10L2B9ZVM9 353 aa25.58■■□□□ 1.69
FXN-202ENST00000396364 DYNLL1P63167 89 aaKnown RBP25.58■■□□□ 1.69
FXN-202ENST00000396364 MAP1SQ66K74 1059 aaPredicted RBP25.58■■□□□ 1.69
FXN-202ENST00000396364 OSBP2Q969R2 916 aa25.58■■□□□ 1.69
FXN-202ENST00000396364 HOOK2Q96ED9 719 aa25.58■■□□□ 1.69
FXN-202ENST00000396364 ASTN2O75129 1339 aaPredicted RBP25.58■■□□□ 1.69
FXN-202ENST00000396364 POLR2AP24928 1970 aaKnown RBP25.57■■□□□ 1.68
FXN-202ENST00000396364 FSTL1Q12841 308 aa25.57■■□□□ 1.68
FXN-202ENST00000396364 NMIQ13287 307 aaPredicted RBP25.57■■□□□ 1.68
FXN-202ENST00000396364 DEFB129Q9H1M3 183 aa25.57■■□□□ 1.68
FXN-202ENST00000396364 ARMT1Q9H993 441 aa25.57■■□□□ 1.68
FXN-202ENST00000396364 RAD50Q92878 1312 aa25.57■■□□□ 1.68
FXN-202ENST00000396364 FOCADQ5VW36 1801 aa25.56■■□□□ 1.68
FXN-202ENST00000396364 GPAA1O43292 621 aa25.56■■□□□ 1.68
FXN-202ENST00000396364 CDC45O75419 566 aa25.56■■□□□ 1.68
FXN-202ENST00000396364 CACNB3P54284 484 aa25.56■■□□□ 1.68
FXN-202ENST00000396364 PICALMQ13492 652 aa25.56■■□□□ 1.68
FXN-202ENST00000396364 CWC27Q6UX04 472 aaKnown RBP25.56■■□□□ 1.68
FXN-202ENST00000396364 AMOTL1Q8IY63 956 aa25.56■■□□□ 1.68
FXN-202ENST00000396364 LCORLQ8N3X6 602 aa25.56■■□□□ 1.68
FXN-202ENST00000396364 FAM151AQ8WW52 585 aa25.56■■□□□ 1.68
FXN-202ENST00000396364 ATP8A2Q9NTI2 1148 aa25.56■■□□□ 1.68
FXN-202ENST00000396364 RPAP1Q9BWH6 1393 aaPredicted RBP25.56■■□□□ 1.68
FXN-202ENST00000396364 WDHD1O75717 1129 aaPredicted RBP25.55■■□□□ 1.68
FXN-202ENST00000396364 CHMLP26374 656 aa25.55■■□□□ 1.68
FXN-202ENST00000396364 NF2P35240 595 aa25.55■■□□□ 1.68
FXN-202ENST00000396364 RASA3Q14644 834 aa25.55■■□□□ 1.68
FXN-202ENST00000396364 SLFNL1Q499Z3 407 aa25.55■■□□□ 1.68
FXN-202ENST00000396364 USP48Q86UV5 1035 aa25.55■■□□□ 1.68
FXN-202ENST00000396364 TGFBRAP1Q8WUH2 860 aa25.55■■□□□ 1.68
FXN-202ENST00000396364 STRBPQ96SI9 672 aaKnown RBP25.55■■□□□ 1.68
FXN-202ENST00000396364 NACAP1Q9BZK3 213 aa25.55■■□□□ 1.68
FXN-202ENST00000396364 SLC4A4Q9Y6R1 1079 aa25.55■■□□□ 1.68
FXN-202ENST00000396364 CHGBP05060 677 aa25.54■■□□□ 1.68
FXN-202ENST00000396364 SUPT20HL1Q3ZLR7 823 aa25.54■■□□□ 1.68
FXN-202ENST00000396364 ZSCAN29Q8IWY8 852 aaPredicted RBP25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms