RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 RTEL1Q9NZ71 1219 aa16.28■□□□□ 0.2
CCHCR1-203ENST00000396268 CEP126Q9P2H0 1117 aa16.28■□□□□ 0.2
CCHCR1-203ENST00000396268 ORC3Q9UBD5 711 aaPredicted RBP16.28■□□□□ 0.2
CCHCR1-203ENST00000396268 TRMT112Q9UI30 125 aaKnown RBP16.28■□□□□ 0.2
CCHCR1-203ENST00000396268 IMMTQ16891 758 aaKnown RBP16.27■□□□□ 0.2
CCHCR1-203ENST00000396268 KRT222Q8N1A0 295 aa16.27■□□□□ 0.2
CCHCR1-203ENST00000396268 LINC00301Q8NCQ3 95 aa16.27■□□□□ 0.2
CCHCR1-203ENST00000396268 LRRN4CLQ8ND94 238 aa16.27■□□□□ 0.2
CCHCR1-203ENST00000396268 CHMP4CQ96CF2 233 aa16.27■□□□□ 0.2
CCHCR1-203ENST00000396268 THSD7AQ9UPZ6 1657 aa16.27■□□□□ 0.2
CCHCR1-203ENST00000396268 PCCAP05165 728 aaPredicted RBP16.27■□□□□ 0.19
CCHCR1-203ENST00000396268 TRIM28Q13263 835 aaKnown RBP16.27■□□□□ 0.19
CCHCR1-203ENST00000396268 TTC39AQ5SRH9 613 aa16.27■□□□□ 0.19
CCHCR1-203ENST00000396268 ISM2Q6H9L7 571 aa16.27■□□□□ 0.19
CCHCR1-203ENST00000396268 SYNE3Q6ZMZ3 975 aa16.27■□□□□ 0.19
CCHCR1-203ENST00000396268 KIAA1468Q9P260 1216 aa16.27■□□□□ 0.19
CCHCR1-203ENST00000396268 SPTLC2O15270 562 aa16.26■□□□□ 0.19
CCHCR1-203ENST00000396268 PRC1O43663 620 aa16.26■□□□□ 0.19
CCHCR1-203ENST00000396268 CAMTA2O94983 1202 aa16.26■□□□□ 0.19
CCHCR1-203ENST00000396268 SYCP1Q15431 976 aa16.26■□□□□ 0.19
CCHCR1-203ENST00000396268 CCDC158Q5M9N0 1113 aa16.26■□□□□ 0.19
CCHCR1-203ENST00000396268 SUSD4Q5VX71 490 aa16.26■□□□□ 0.19
CCHCR1-203ENST00000396268 GPR108Q9NPR9 543 aa16.26■□□□□ 0.19
CCHCR1-203ENST00000396268 TMC6Q7Z403 805 aa16.26■□□□□ 0.19
CCHCR1-203ENST00000396268 RALYLQ86SE5 291 aaKnown RBP16.26■□□□□ 0.19
CCHCR1-203ENST00000396268 CCAR2Q8N163 923 aaKnown RBP16.26■□□□□ 0.19
CCHCR1-203ENST00000396268 IFNKQ9P0W0 207 aa16.26■□□□□ 0.19
CCHCR1-203ENST00000396268 KCNG4Q8TDN1 519 aa16.26■□□□□ 0.19
CCHCR1-203ENST00000396268 GREM2Q9H772 168 aa16.26■□□□□ 0.19
CCHCR1-203ENST00000396268 MORC2Q9Y6X9 1032 aaPredicted RBP16.26■□□□□ 0.19
CCHCR1-203ENST00000396268 DHX16O60231 1041 aaKnown RBP16.25■□□□□ 0.19
CCHCR1-203ENST00000396268 FGAP02671 866 aa16.25■□□□□ 0.19
CCHCR1-203ENST00000396268 SLC3A2P08195 630 aaKnown RBP16.25■□□□□ 0.19
CCHCR1-203ENST00000396268 ADORA1P30542 326 aa16.25■□□□□ 0.19
CCHCR1-203ENST00000396268 GSDMDP57764 484 aa16.25■□□□□ 0.19
CCHCR1-203ENST00000396268 ERCC6LQ2NKX8 1250 aa16.25■□□□□ 0.19
CCHCR1-203ENST00000396268 NYAP1Q6ZVC0 841 aa16.25■□□□□ 0.19
CCHCR1-203ENST00000396268 XPO4Q9C0E2 1151 aaKnown RBP16.25■□□□□ 0.19
CCHCR1-203ENST00000396268 TRPC5Q9UL62 973 aaPredicted RBP16.25■□□□□ 0.19
CCHCR1-203ENST00000396268 IRS4O14654 1257 aaPredicted RBP16.25■□□□□ 0.19
CCHCR1-203ENST00000396268 CCDC57Q2TAC2 916 aa16.25■□□□□ 0.19
CCHCR1-203ENST00000396268 MYSM1Q5VVJ2 828 aa16.25■□□□□ 0.19
CCHCR1-203ENST00000396268 ZNF34Q8IZ26 560 aa16.25■□□□□ 0.19
CCHCR1-203ENST00000396268 SMARCC1Q92922 1105 aaPredicted RBP16.25■□□□□ 0.19
CCHCR1-203ENST00000396268 BTAF1O14981 1849 aa16.25■□□□□ 0.19
CCHCR1-203ENST00000396268 A0A1W2PQ27 194 aa16.24■□□□□ 0.19
CCHCR1-203ENST00000396268 A0A1W2PQ64 194 aa16.24■□□□□ 0.19
CCHCR1-203ENST00000396268 A0A1W2PQD8 194 aa16.24■□□□□ 0.19
CCHCR1-203ENST00000396268 MARCKSP29966 332 aaPredicted RBP16.24■□□□□ 0.19
CCHCR1-203ENST00000396268 IRX5P78411 483 aaPredicted RBP16.24■□□□□ 0.19
CCHCR1-203ENST00000396268 GABPB1Q06547 395 aaPredicted RBP16.24■□□□□ 0.19
CCHCR1-203ENST00000396268 FBXO18Q8NFZ0 1043 aa16.24■□□□□ 0.19
CCHCR1-203ENST00000396268 ATRNO75882 1429 aa16.24■□□□□ 0.19
CCHCR1-203ENST00000396268 ZNF202O95125 648 aa16.24■□□□□ 0.19
CCHCR1-203ENST00000396268 LRRFIP1Q32MZ4 808 aaKnown RBP16.24■□□□□ 0.19
CCHCR1-203ENST00000396268 TAF7LQ5H9L4 462 aa16.24■□□□□ 0.19
CCHCR1-203ENST00000396268 NBPF11Q86T75 865 aa16.24■□□□□ 0.19
CCHCR1-203ENST00000396268 ZNF397Q8NF99 534 aaPredicted RBP16.24■□□□□ 0.19
CCHCR1-203ENST00000396268 ERVV-1B6SEH8 477 aa16.23■□□□□ 0.19
CCHCR1-203ENST00000396268 BICDL1Q6ZP65 573 aa16.23■□□□□ 0.19
CCHCR1-203ENST00000396268 TTLL11Q8NHH1 800 aa16.23■□□□□ 0.19
CCHCR1-203ENST00000396268 POLR3GO15318 223 aaPredicted RBP16.23■□□□□ 0.19
CCHCR1-203ENST00000396268 SFPQP23246 707 aaKnown RBP eCLIP16.23■□□□□ 0.19
CCHCR1-203ENST00000396268 TPM4P67936 248 aa16.23■□□□□ 0.19
CCHCR1-203ENST00000396268 PI16Q6UXB8 463 aa16.23■□□□□ 0.19
CCHCR1-203ENST00000396268 XAGE2Q96GT9 111 aa16.23■□□□□ 0.19
CCHCR1-203ENST00000396268 SRP68Q9UHB9 627 aaKnown RBP16.23■□□□□ 0.19
CCHCR1-203ENST00000396268 LMOD1P29536 600 aaPredicted RBP16.23■□□□□ 0.19
CCHCR1-203ENST00000396268 PUS7LQ9H0K6 701 aaKnown RBP16.23■□□□□ 0.19
CCHCR1-203ENST00000396268 POLR3EQ9NVU0 708 aa16.23■□□□□ 0.19
CCHCR1-203ENST00000396268 LAMA4Q16363 1823 aa16.23■□□□□ 0.19
CCHCR1-203ENST00000396268 KIF28PB7ZC32 967 aa16.22■□□□□ 0.19
CCHCR1-203ENST00000396268 ZNF213O14771 459 aa16.22■□□□□ 0.19
CCHCR1-203ENST00000396268 YEATS4O95619 227 aa16.22■□□□□ 0.19
CCHCR1-203ENST00000396268 SCARF1Q14162 830 aa16.22■□□□□ 0.19
CCHCR1-203ENST00000396268 PTPN21Q16825 1174 aa16.22■□□□□ 0.19
CCHCR1-203ENST00000396268 NCOA7Q8NI08 942 aa16.22■□□□□ 0.19
CCHCR1-203ENST00000396268 NIP7Q9Y221 180 aaKnown RBP eCLIP16.22■□□□□ 0.19
CCHCR1-203ENST00000396268 CSF1RP07333 972 aa16.22■□□□□ 0.19
CCHCR1-203ENST00000396268 ZAP70P43403 619 aa16.22■□□□□ 0.19
CCHCR1-203ENST00000396268 GNL2Q13823 731 aaKnown RBP16.22■□□□□ 0.19
CCHCR1-203ENST00000396268 ZNF446Q9NWS9 450 aa16.22■□□□□ 0.19
CCHCR1-203ENST00000396268 CCNL1Q9UK58 526 aaPredicted RBP16.22■□□□□ 0.19
CCHCR1-203ENST00000396268 ONECUT3O60422 494 aaPredicted RBP16.21■□□□□ 0.19
CCHCR1-203ENST00000396268 RXRAP19793 462 aa16.21■□□□□ 0.19
CCHCR1-203ENST00000396268 ITGA6P23229 1130 aa16.21■□□□□ 0.19
CCHCR1-203ENST00000396268 ANO1Q5XXA6 986 aa16.21■□□□□ 0.19
CCHCR1-203ENST00000396268 SYT10Q6XYQ8 523 aa16.21■□□□□ 0.19
CCHCR1-203ENST00000396268 BRAPQ7Z569 592 aa16.21■□□□□ 0.19
CCHCR1-203ENST00000396268 CCDC24Q8N4L8 307 aa16.21■□□□□ 0.19
CCHCR1-203ENST00000396268 HPS5Q9UPZ3 1129 aa16.21■□□□□ 0.19
CCHCR1-203ENST00000396268 COL5A3P25940 1745 aaPredicted RBP16.21■□□□□ 0.19
CCHCR1-203ENST00000396268 ANKRD36CQ5JPF3 1778 aa16.21■□□□□ 0.19
CCHCR1-203ENST00000396268 FOXP2O15409 715 aa16.21■□□□□ 0.19
CCHCR1-203ENST00000396268 NRDCO43847 1150 aa16.21■□□□□ 0.19
CCHCR1-203ENST00000396268 PFKFB1P16118 471 aa16.21■□□□□ 0.19
CCHCR1-203ENST00000396268 CTSWP56202 376 aa16.21■□□□□ 0.19
CCHCR1-203ENST00000396268 OSBPL5Q9H0X9 879 aaPredicted RBP16.21■□□□□ 0.19
CCHCR1-203ENST00000396268 IMPACTQ9P2X3 320 aa16.21■□□□□ 0.19
CCHCR1-203ENST00000396268 EVCP57679 992 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms