RNA–Protein interactions for RNA: ENST00000395469.6

SNCAIP-205, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 3,126 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-205ENST00000395469 CCDC102BQ68D86 513 aa13.36□□□□□ -0.27
SNCAIP-205ENST00000395469 CEP83Q9Y592 693 aa13.36□□□□□ -0.27
SNCAIP-205ENST00000395469 ZNF532Q9HCE3 1301 aa13.36□□□□□ -0.27
SNCAIP-205ENST00000395469 PDE8BO95263 885 aa13.35□□□□□ -0.27
SNCAIP-205ENST00000395469 ADD2P35612 726 aa13.35□□□□□ -0.27
SNCAIP-205ENST00000395469 TBC1D10CQ8IV04 446 aa13.35□□□□□ -0.27
SNCAIP-205ENST00000395469 STK11IPQ8N1F8 1099 aa13.35□□□□□ -0.27
SNCAIP-205ENST00000395469 TDRD7Q8NHU6 1098 aaKnown RBP13.35□□□□□ -0.27
SNCAIP-205ENST00000395469 AIFM3Q96NN9 605 aa13.35□□□□□ -0.27
SNCAIP-205ENST00000395469 SDF4Q9BRK5 362 aa13.35□□□□□ -0.27
SNCAIP-205ENST00000395469 WWC3Q9ULE0 1092 aa13.35□□□□□ -0.27
SNCAIP-205ENST00000395469 SHANK3Q9BYB0 1731 aa13.35□□□□□ -0.27
SNCAIP-205ENST00000395469 BECN2A8MW95 431 aa13.35□□□□□ -0.27
SNCAIP-205ENST00000395469 KMT5BQ4FZB7 885 aa13.35□□□□□ -0.27
SNCAIP-205ENST00000395469 PAPPAQ13219 1627 aa13.35□□□□□ -0.27
SNCAIP-205ENST00000395469 SMTNL1A8MU46 457 aa13.35□□□□□ -0.27
SNCAIP-205ENST00000395469 B4E1Z4 1266 aa13.35□□□□□ -0.27
SNCAIP-205ENST00000395469 FAM160A1Q05DH4 1040 aa13.35□□□□□ -0.27
SNCAIP-205ENST00000395469 TICAM2Q86XR7 235 aa13.35□□□□□ -0.27
SNCAIP-205ENST00000395469 ZNF397Q8NF99 534 aaPredicted RBP13.35□□□□□ -0.27
SNCAIP-205ENST00000395469 CLIP2Q9UDT6 1046 aa13.35□□□□□ -0.27
SNCAIP-205ENST00000395469 UBN2Q6ZU65 1347 aa13.34□□□□□ -0.27
SNCAIP-205ENST00000395469 EXOC5O00471 708 aa13.34□□□□□ -0.27
SNCAIP-205ENST00000395469 TRIM66O15016 1216 aa13.34□□□□□ -0.27
SNCAIP-205ENST00000395469 CASQ1P31415 396 aa13.34□□□□□ -0.27
SNCAIP-205ENST00000395469 MICU3Q86XE3 530 aa13.34□□□□□ -0.27
SNCAIP-205ENST00000395469 NBPF3Q9H094 633 aa13.34□□□□□ -0.27
SNCAIP-205ENST00000395469 SENP2Q9HC62 589 aa13.34□□□□□ -0.27
SNCAIP-205ENST00000395469 CDHR2Q9BYE9 1310 aa13.34□□□□□ -0.27
SNCAIP-205ENST00000395469 SYT10Q6XYQ8 523 aa13.34□□□□□ -0.27
SNCAIP-205ENST00000395469 CYB5R4Q7L1T6 521 aa13.34□□□□□ -0.27
SNCAIP-205ENST00000395469 FBXO18Q8NFZ0 1043 aa13.34□□□□□ -0.27
SNCAIP-205ENST00000395469 PHKBQ93100 1093 aa13.34□□□□□ -0.27
SNCAIP-205ENST00000395469 MYL10Q9BUA6 226 aa13.34□□□□□ -0.27
SNCAIP-205ENST00000395469 KIF28PB7ZC32 967 aa13.33□□□□□ -0.27
SNCAIP-205ENST00000395469 PDE8AO60658 829 aa13.33□□□□□ -0.27
SNCAIP-205ENST00000395469 TPM3P06753 285 aa13.33□□□□□ -0.27
SNCAIP-205ENST00000395469 CCDC172P0C7W6 258 aa13.33□□□□□ -0.27
SNCAIP-205ENST00000395469 PDE6AP16499 860 aa13.33□□□□□ -0.27
SNCAIP-205ENST00000395469 GUCY2CP25092 1073 aa13.33□□□□□ -0.27
SNCAIP-205ENST00000395469 NDUFA8P51970 172 aa13.33□□□□□ -0.27
SNCAIP-205ENST00000395469 STX1AQ16623 288 aa13.33□□□□□ -0.27
SNCAIP-205ENST00000395469 ZSCAN25Q6NSZ9 544 aa13.33□□□□□ -0.27
SNCAIP-205ENST00000395469 PLA2G4DQ86XP0 818 aa13.33□□□□□ -0.27
SNCAIP-205ENST00000395469 VGLL2Q8N8G2 317 aa13.33□□□□□ -0.27
SNCAIP-205ENST00000395469 ENGASEQ8NFI3 743 aa13.33□□□□□ -0.27
SNCAIP-205ENST00000395469 MRPS27Q92552 414 aaKnown RBP13.33□□□□□ -0.27
SNCAIP-205ENST00000395469 AIDAQ96BJ3 306 aa13.33□□□□□ -0.27
SNCAIP-205ENST00000395469 EVCP57679 992 aa13.33□□□□□ -0.28
SNCAIP-205ENST00000395469 IQCB1Q15051 598 aa13.33□□□□□ -0.28
SNCAIP-205ENST00000395469 SYNE3Q6ZMZ3 975 aa13.33□□□□□ -0.28
SNCAIP-205ENST00000395469 LINC00301Q8NCQ3 95 aa13.33□□□□□ -0.28
SNCAIP-205ENST00000395469 ACSBG1Q96GR2 724 aa13.33□□□□□ -0.28
SNCAIP-205ENST00000395469 C16orf45Q96MC5 204 aaPredicted RBP13.33□□□□□ -0.28
SNCAIP-205ENST00000395469 BRMS1Q9HCU9 246 aa13.33□□□□□ -0.28
SNCAIP-205ENST00000395469 FAM53CQ9NYF3 392 aa13.33□□□□□ -0.28
SNCAIP-205ENST00000395469 NWD2Q9ULI1 1742 aa13.33□□□□□ -0.28
SNCAIP-205ENST00000395469 MYO1CO00159 1063 aa13.33□□□□□ -0.28
SNCAIP-205ENST00000395469 RBM6P78332 1123 aaKnown RBP13.33□□□□□ -0.28
SNCAIP-205ENST00000395469 NFXL1Q6ZNB6 911 aa13.33□□□□□ -0.28
SNCAIP-205ENST00000395469 CCDC112Q8NEF3 446 aa13.33□□□□□ -0.28
SNCAIP-205ENST00000395469 SEC31BQ9NQW1 1179 aa13.33□□□□□ -0.28
SNCAIP-205ENST00000395469 ZNF446Q9NWS9 450 aa13.33□□□□□ -0.28
SNCAIP-205ENST00000395469 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.33□□□□□ -0.28
SNCAIP-205ENST00000395469 BIN1O00499 593 aa13.32□□□□□ -0.28
SNCAIP-205ENST00000395469 CTAGE5O15320 804 aa13.32□□□□□ -0.28
SNCAIP-205ENST00000395469 MARCKSP29966 332 aaPredicted RBP13.32□□□□□ -0.28
SNCAIP-205ENST00000395469 METAP2P50579 478 aaKnown RBP eCLIP13.32□□□□□ -0.28
SNCAIP-205ENST00000395469 TTF1Q15361 905 aaPredicted RBP13.32□□□□□ -0.28
SNCAIP-205ENST00000395469 CCDC144BQ3MJ40 725 aa13.32□□□□□ -0.28
SNCAIP-205ENST00000395469 MYSM1Q5VVJ2 828 aa13.32□□□□□ -0.28
SNCAIP-205ENST00000395469 RTEL1Q9NZ71 1219 aa13.32□□□□□ -0.28
SNCAIP-205ENST00000395469 ANGEL1Q9UNK9 670 aaKnown RBP13.32□□□□□ -0.28
SNCAIP-205ENST00000395469 ATL3Q6DD88 541 aa13.32□□□□□ -0.28
SNCAIP-205ENST00000395469 MAGEB6Q8N7X4 407 aa13.32□□□□□ -0.28
SNCAIP-205ENST00000395469 NEK11Q8NG66 645 aa13.32□□□□□ -0.28
SNCAIP-205ENST00000395469 MPHOSPH8Q99549 860 aa13.32□□□□□ -0.28
SNCAIP-205ENST00000395469 SPEF2Q9C093 1822 aa13.31□□□□□ -0.28
SNCAIP-205ENST00000395469 SPTLC2O15270 562 aa13.31□□□□□ -0.28
SNCAIP-205ENST00000395469 CTDSPL2Q05D32 466 aa13.31□□□□□ -0.28
SNCAIP-205ENST00000395469 GNL2Q13823 731 aaKnown RBP13.31□□□□□ -0.28
SNCAIP-205ENST00000395469 ARID5BQ14865 1188 aa13.31□□□□□ -0.28
SNCAIP-205ENST00000395469 FBXL16Q8N461 479 aa13.31□□□□□ -0.28
SNCAIP-205ENST00000395469 AOPEPQ8N6M6 819 aa13.31□□□□□ -0.28
SNCAIP-205ENST00000395469 BCL9O00512 1426 aa13.31□□□□□ -0.28
SNCAIP-205ENST00000395469 NEDD4P46934 1319 aa13.31□□□□□ -0.28
SNCAIP-205ENST00000395469 UBE2Q2LH0YL09 131 aa13.31□□□□□ -0.28
SNCAIP-205ENST00000395469 PUM3Q15397 648 aaKnown RBP13.31□□□□□ -0.28
SNCAIP-205ENST00000395469 RRP12Q5JTH9 1297 aaKnown RBP13.31□□□□□ -0.28
SNCAIP-205ENST00000395469 ADALQ6DHV7 355 aa13.31□□□□□ -0.28
SNCAIP-205ENST00000395469 ISM2Q6H9L7 571 aa13.31□□□□□ -0.28
SNCAIP-205ENST00000395469 FILIP1Q7Z7B0 1213 aa13.31□□□□□ -0.28
SNCAIP-205ENST00000395469 EGFL6Q8IUX8 553 aa13.31□□□□□ -0.28
SNCAIP-205ENST00000395469 FMR1NBQ8N0W7 255 aaPredicted RBP13.31□□□□□ -0.28
SNCAIP-205ENST00000395469 ALG1Q9BT22 464 aa13.31□□□□□ -0.28
SNCAIP-205ENST00000395469 IQSEC3Q9UPP2 1182 aaPredicted RBP13.31□□□□□ -0.28
SNCAIP-205ENST00000395469 CDC27P30260 824 aa13.3□□□□□ -0.28
SNCAIP-205ENST00000395469 RASGRF1Q13972 1273 aa13.3□□□□□ -0.28
SNCAIP-205ENST00000395469 ZRSR1Q15695 479 aaKnown RBP13.3□□□□□ -0.28
SNCAIP-205ENST00000395469 SUSD4Q5VX71 490 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms