RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 CIAO1O76071 339 aa16.89■□□□□ 0.29
SCAF11-203ENST00000395453 IFIT1P09914 478 aaKnown RBP16.89■□□□□ 0.29
SCAF11-203ENST00000395453 HDLBPQ00341 1268 aaKnown RBP16.89■□□□□ 0.29
SCAF11-203ENST00000395453 DZIP1LQ8IYY4 767 aaKnown RBP16.89■□□□□ 0.29
SCAF11-203ENST00000395453 LPIN2Q92539 896 aa16.89■□□□□ 0.29
SCAF11-203ENST00000395453 OPTNQ96CV9 577 aa16.89■□□□□ 0.29
SCAF11-203ENST00000395453 ZFYVE28Q9HCC9 887 aa16.89■□□□□ 0.29
SCAF11-203ENST00000395453 ZNF70Q9UC06 446 aaPredicted RBP16.89■□□□□ 0.29
SCAF11-203ENST00000395453 PTCH2Q9Y6C5 1203 aa16.89■□□□□ 0.29
SCAF11-203ENST00000395453 CRKP46108 304 aa16.88■□□□□ 0.29
SCAF11-203ENST00000395453 RASA3Q14644 834 aa16.88■□□□□ 0.29
SCAF11-203ENST00000395453 MS4A4AQ96JQ5 239 aa16.88■□□□□ 0.29
SCAF11-203ENST00000395453 MEIS3Q99687 375 aa16.88■□□□□ 0.29
SCAF11-203ENST00000395453 SUGT1Q9Y2Z0 365 aa16.88■□□□□ 0.29
SCAF11-203ENST00000395453 LRRFIP2Q9Y608 721 aaKnown RBP16.88■□□□□ 0.29
SCAF11-203ENST00000395453 FRAT2O75474 233 aaPredicted RBP16.87■□□□□ 0.29
SCAF11-203ENST00000395453 CHAF1AQ13111 956 aaPredicted RBP16.87■□□□□ 0.29
SCAF11-203ENST00000395453 TAF1CQ15572 869 aaPredicted RBP16.87■□□□□ 0.29
SCAF11-203ENST00000395453 TDRD3Q9H7E2 651 aaKnown RBP16.87■□□□□ 0.29
SCAF11-203ENST00000395453 ELP3Q9H9T3 547 aa16.87■□□□□ 0.29
SCAF11-203ENST00000395453 RANBP2P49792 3224 aaKnown RBP16.86■□□□□ 0.29
SCAF11-203ENST00000395453 GABBR2O75899 941 aa16.86■□□□□ 0.29
SCAF11-203ENST00000395453 SLC5A1P13866 664 aa16.86■□□□□ 0.29
SCAF11-203ENST00000395453 TNFAIP1Q13829 316 aa16.86■□□□□ 0.29
SCAF11-203ENST00000395453 MIER1Q8N108 512 aa16.86■□□□□ 0.29
SCAF11-203ENST00000395453 COPRSQ9NQ92 184 aa16.86■□□□□ 0.29
SCAF11-203ENST00000395453 CEP126Q9P2H0 1117 aa16.86■□□□□ 0.29
SCAF11-203ENST00000395453 IPO8O15397 1037 aaKnown RBP16.85■□□□□ 0.29
SCAF11-203ENST00000395453 WDHD1O75717 1129 aaPredicted RBP16.85■□□□□ 0.29
SCAF11-203ENST00000395453 MYCP01106 439 aaPredicted RBP16.85■□□□□ 0.29
SCAF11-203ENST00000395453 GNAI3P08754 354 aa16.85■□□□□ 0.29
SCAF11-203ENST00000395453 GTF2A2P52657 109 aa16.85■□□□□ 0.29
SCAF11-203ENST00000395453 BRI3BPQ8WY22 251 aa16.85■□□□□ 0.29
SCAF11-203ENST00000395453 TEPSINQ96N21 525 aa16.85■□□□□ 0.29
SCAF11-203ENST00000395453 SIL1Q9H173 461 aa16.85■□□□□ 0.29
SCAF11-203ENST00000395453 CCL15-CCL14A0A0B4J2E2 113 aa16.84■□□□□ 0.29
SCAF11-203ENST00000395453 BCAR3O75815 825 aa16.84■□□□□ 0.29
SCAF11-203ENST00000395453 TRIM27P14373 513 aa16.84■□□□□ 0.29
SCAF11-203ENST00000395453 IL15P40933 162 aaPredicted RBP16.84■□□□□ 0.29
SCAF11-203ENST00000395453 MTX1Q13505 466 aa16.84■□□□□ 0.29
SCAF11-203ENST00000395453 KIF22Q14807 665 aa16.84■□□□□ 0.29
SCAF11-203ENST00000395453 CCL15Q16663 113 aa16.84■□□□□ 0.29
SCAF11-203ENST00000395453 TEKT1Q969V4 418 aa16.84■□□□□ 0.29
SCAF11-203ENST00000395453 ZDHHC15Q96MV8 337 aa16.84■□□□□ 0.29
SCAF11-203ENST00000395453 PA2G4Q9UQ80 394 aaKnown RBP16.84■□□□□ 0.29
SCAF11-203ENST00000395453 ATP2B3Q16720 1220 aa16.83■□□□□ 0.28
SCAF11-203ENST00000395453 DIEXFQ68CQ4 756 aaKnown RBP16.83■□□□□ 0.28
SCAF11-203ENST00000395453 APOBEC3HQ6NTF7 200 aaKnown RBP16.83■□□□□ 0.28
SCAF11-203ENST00000395453 HHIPL2Q6UWX4 724 aa16.83■□□□□ 0.28
SCAF11-203ENST00000395453 ATF7IPQ6VMQ6 1270 aa16.83■□□□□ 0.28
SCAF11-203ENST00000395453 WDR66Q8TBY9 1149 aa16.83■□□□□ 0.28
SCAF11-203ENST00000395453 SH3TC2Q8TF17 1288 aa16.83■□□□□ 0.28
SCAF11-203ENST00000395453 TCP10L2B9ZVM9 353 aa16.82■□□□□ 0.28
SCAF11-203ENST00000395453 GNRH1P01148 92 aa16.82■□□□□ 0.28
SCAF11-203ENST00000395453 MAP3K9P80192 1104 aa16.82■□□□□ 0.28
SCAF11-203ENST00000395453 FKBP1CQ5VVH2 108 aa16.82■□□□□ 0.28
SCAF11-203ENST00000395453 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.82■□□□□ 0.28
SCAF11-203ENST00000395453 FAM43AQ8N2R8 423 aa16.82■□□□□ 0.28
SCAF11-203ENST00000395453 DPF3Q92784 378 aa16.82■□□□□ 0.28
SCAF11-203ENST00000395453 RBM27Q9P2N5 1060 aaKnown RBP16.82■□□□□ 0.28
SCAF11-203ENST00000395453 CSADQ9Y600 493 aa16.82■□□□□ 0.28
SCAF11-203ENST00000395453 MAST3O60307 1309 aa16.82■□□□□ 0.28
SCAF11-203ENST00000395453 MYH13Q9UKX3 1938 aa16.81■□□□□ 0.28
SCAF11-203ENST00000395453 TLR2O60603 784 aa16.81■□□□□ 0.28
SCAF11-203ENST00000395453 TNNI2P48788 182 aa16.81■□□□□ 0.28
SCAF11-203ENST00000395453 PRMT2P55345 433 aa16.81■□□□□ 0.28
SCAF11-203ENST00000395453 VGLL4Q14135 290 aa16.81■□□□□ 0.28
SCAF11-203ENST00000395453 CDAN1Q8IWY9 1227 aa16.81■□□□□ 0.28
SCAF11-203ENST00000395453 TMEM39BQ9GZU3 492 aa16.81■□□□□ 0.28
SCAF11-203ENST00000395453 ZCCHC17Q9NP64 241 aaKnown RBP16.81■□□□□ 0.28
SCAF11-203ENST00000395453 TNNQ9UQP3 1299 aa16.81■□□□□ 0.28
SCAF11-203ENST00000395453 A0A0C4DFX4 3053 aa16.81■□□□□ 0.28
SCAF11-203ENST00000395453 DLL1O00548 723 aa16.8■□□□□ 0.28
SCAF11-203ENST00000395453 LACTBP83111 547 aaPredicted RBP16.8■□□□□ 0.28
SCAF11-203ENST00000395453 FAM83AQ86UY5 434 aa16.8■□□□□ 0.28
SCAF11-203ENST00000395453 GNL3LQ9NVN8 582 aaKnown RBP16.8■□□□□ 0.28
SCAF11-203ENST00000395453 OTOFQ9HC10 1997 aa16.8■□□□□ 0.28
SCAF11-203ENST00000395453 SEMA3EO15041 775 aa16.79■□□□□ 0.28
SCAF11-203ENST00000395453 SRGAP3O43295 1099 aa16.79■□□□□ 0.28
SCAF11-203ENST00000395453 PHKA1P46020 1223 aa16.79■□□□□ 0.28
SCAF11-203ENST00000395453 HNRNPUQ00839 825 aaKnown RBP eCLIP16.79■□□□□ 0.28
SCAF11-203ENST00000395453 SLC17A8Q8NDX2 589 aa16.79■□□□□ 0.28
SCAF11-203ENST00000395453 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.79■□□□□ 0.28
SCAF11-203ENST00000395453 NKX2-3Q8TAU0 364 aa16.79■□□□□ 0.28
SCAF11-203ENST00000395453 FRAT1Q92837 279 aaPredicted RBP16.79■□□□□ 0.28
SCAF11-203ENST00000395453 SALL1Q9NSC2 1324 aa16.79■□□□□ 0.28
SCAF11-203ENST00000395453 CETPP11597 493 aa16.78■□□□□ 0.28
SCAF11-203ENST00000395453 CACNB3P54284 484 aa16.78■□□□□ 0.28
SCAF11-203ENST00000395453 TIMM10P62072 90 aa16.78■□□□□ 0.28
SCAF11-203ENST00000395453 ARHGAP39Q9C0H5 1083 aa16.78■□□□□ 0.28
SCAF11-203ENST00000395453 DENND2AQ9ULE3 1009 aa16.78■□□□□ 0.28
SCAF11-203ENST00000395453 SPDYE5A6NIY4 337 aa16.77■□□□□ 0.28
SCAF11-203ENST00000395453 GNAI2P04899 355 aa16.77■□□□□ 0.28
SCAF11-203ENST00000395453 PRDX5P30044 214 aa16.77■□□□□ 0.28
SCAF11-203ENST00000395453 ADORA1P30542 326 aa16.77■□□□□ 0.28
SCAF11-203ENST00000395453 CCDC102BQ68D86 513 aa16.77■□□□□ 0.28
SCAF11-203ENST00000395453 CLUAP1Q96AJ1 413 aa16.77■□□□□ 0.28
SCAF11-203ENST00000395453 SHISA4Q96DD7 197 aa16.77■□□□□ 0.28
SCAF11-203ENST00000395453 HTATIP2Q9BUP3 242 aa16.77■□□□□ 0.28
SCAF11-203ENST00000395453 TFCP2Q12800 502 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms