RNA–Protein interactions for RNA: ENST00000394853.8

PPP3CA-202, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 3,604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-202ENST00000394853 ZSCAN29Q8IWY8 852 aaPredicted RBP16.46■□□□□ 0.23
PPP3CA-202ENST00000394853 PRC1O43663 620 aa16.45■□□□□ 0.22
PPP3CA-202ENST00000394853 MBD3O95983 291 aa16.45■□□□□ 0.22
PPP3CA-202ENST00000394853 CEBPZQ03701 1054 aaKnown RBP16.45■□□□□ 0.22
PPP3CA-202ENST00000394853 PROM2Q8N271 834 aa16.45■□□□□ 0.22
PPP3CA-202ENST00000394853 CNKSR1Q969H4 720 aa16.45■□□□□ 0.22
PPP3CA-202ENST00000394853 SLC4A8Q2Y0W8 1093 aa16.45■□□□□ 0.22
PPP3CA-202ENST00000394853 ZNF804AQ7Z570 1209 aa16.45■□□□□ 0.22
PPP3CA-202ENST00000394853 JDP2Q8WYK2 163 aa16.45■□□□□ 0.22
PPP3CA-202ENST00000394853 GPR101Q96P66 508 aaPredicted RBP16.45■□□□□ 0.22
PPP3CA-202ENST00000394853 ALDH8A1Q9H2A2 487 aaPredicted RBP16.45■□□□□ 0.22
PPP3CA-202ENST00000394853 TAF1P21675 1872 aa16.45■□□□□ 0.22
PPP3CA-202ENST00000394853 RXRAP19793 462 aa16.45■□□□□ 0.22
PPP3CA-202ENST00000394853 PDCP20941 246 aa16.45■□□□□ 0.22
PPP3CA-202ENST00000394853 KLRK1P26718 216 aa16.45■□□□□ 0.22
PPP3CA-202ENST00000394853 MTMR7Q9Y216 660 aa16.45■□□□□ 0.22
PPP3CA-202ENST00000394853 DOK7Q18PE1 504 aa16.44■□□□□ 0.22
PPP3CA-202ENST00000394853 MINPP1Q9UNW1 487 aa16.44■□□□□ 0.22
PPP3CA-202ENST00000394853 COL4A1P02462 1669 aa16.44■□□□□ 0.22
PPP3CA-202ENST00000394853 UBE3CQ15386 1083 aa16.44■□□□□ 0.22
PPP3CA-202ENST00000394853 C21orf2O43822 256 aa16.44■□□□□ 0.22
PPP3CA-202ENST00000394853 TDO2P48775 406 aa16.44■□□□□ 0.22
PPP3CA-202ENST00000394853 TBC1D10CQ8IV04 446 aa16.44■□□□□ 0.22
PPP3CA-202ENST00000394853 LARGE2Q8N3Y3 721 aa16.44■□□□□ 0.22
PPP3CA-202ENST00000394853 ZNF512BQ96KM6 892 aaPredicted RBP16.44■□□□□ 0.22
PPP3CA-202ENST00000394853 PTPDC1A2A3K4 754 aa16.43■□□□□ 0.22
PPP3CA-202ENST00000394853 BBOX1O75936 387 aa16.43■□□□□ 0.22
PPP3CA-202ENST00000394853 PDIA3P30101 505 aaKnown RBP16.43■□□□□ 0.22
PPP3CA-202ENST00000394853 NASPP49321 788 aaPredicted RBP16.43■□□□□ 0.22
PPP3CA-202ENST00000394853 CTDSPL2Q05D32 466 aa16.43■□□□□ 0.22
PPP3CA-202ENST00000394853 NCOA7Q8NI08 942 aa16.43■□□□□ 0.22
PPP3CA-202ENST00000394853 CHMP4CQ96CF2 233 aa16.43■□□□□ 0.22
PPP3CA-202ENST00000394853 EYA3Q99504 573 aa16.43■□□□□ 0.22
PPP3CA-202ENST00000394853 MYO5AQ9Y4I1 1855 aaKnown RBP16.43■□□□□ 0.22
PPP3CA-202ENST00000394853 KLF18A0A0U1RQI7 1052 aa16.43■□□□□ 0.22
PPP3CA-202ENST00000394853 B4E1Z4 1266 aa16.43■□□□□ 0.22
PPP3CA-202ENST00000394853 STRBPQ96SI9 672 aaKnown RBP16.43■□□□□ 0.22
PPP3CA-202ENST00000394853 RBSNQ9H1K0 784 aa16.43■□□□□ 0.22
PPP3CA-202ENST00000394853 TCRBV5S4A2TA0A5A2 114 aa16.43■□□□□ 0.22
PPP3CA-202ENST00000394853 MINDY4BA8MYZ0 360 aa16.43■□□□□ 0.22
PPP3CA-202ENST00000394853 CYP7A1P22680 504 aa16.43■□□□□ 0.22
PPP3CA-202ENST00000394853 MCM5P33992 734 aa16.43■□□□□ 0.22
PPP3CA-202ENST00000394853 CCDC144CPQ8IYA2 1237 aa16.43■□□□□ 0.22
PPP3CA-202ENST00000394853 AKAP11Q9UKA4 1901 aa16.42■□□□□ 0.22
PPP3CA-202ENST00000394853 PFKFB2O60825 505 aa16.42■□□□□ 0.22
PPP3CA-202ENST00000394853 CTDNEP1O95476 244 aa16.42■□□□□ 0.22
PPP3CA-202ENST00000394853 RBM26Q5T8P6 1007 aaKnown RBP16.42■□□□□ 0.22
PPP3CA-202ENST00000394853 BRIP1Q9BX63 1249 aa16.42■□□□□ 0.22
PPP3CA-202ENST00000394853 NAPBQ9H115 298 aa16.42■□□□□ 0.22
PPP3CA-202ENST00000394853 SF3B3Q15393 1217 aaKnown RBP16.42■□□□□ 0.22
PPP3CA-202ENST00000394853 GPR162Q16538 588 aa16.42■□□□□ 0.22
PPP3CA-202ENST00000394853 LCORLQ8N3X6 602 aa16.42■□□□□ 0.22
PPP3CA-202ENST00000394853 NSUN7Q8NE18 718 aaKnown RBP16.42■□□□□ 0.22
PPP3CA-202ENST00000394853 NACAP1Q9BZK3 213 aa16.42■□□□□ 0.22
PPP3CA-202ENST00000394853 NBPF3Q9H094 633 aa16.42■□□□□ 0.22
PPP3CA-202ENST00000394853 GOLGA8BA8MQT2 603 aa16.42■□□□□ 0.22
PPP3CA-202ENST00000394853 PPEF1O14829 653 aaPredicted RBP16.42■□□□□ 0.22
PPP3CA-202ENST00000394853 GRAPQ13588 217 aa16.42■□□□□ 0.22
PPP3CA-202ENST00000394853 OTUD7BQ6GQQ9 843 aa16.42■□□□□ 0.22
PPP3CA-202ENST00000394853 GRAPLQ8TC17 118 aaPredicted RBP16.42■□□□□ 0.22
PPP3CA-202ENST00000394853 BSDC1Q9NW68 430 aaPredicted RBP16.42■□□□□ 0.22
PPP3CA-202ENST00000394853 PPIP5K2O43314 1243 aa16.41■□□□□ 0.22
PPP3CA-202ENST00000394853 ANTXR2P58335 489 aa16.41■□□□□ 0.22
PPP3CA-202ENST00000394853 ZNF445P59923 1031 aa16.41■□□□□ 0.22
PPP3CA-202ENST00000394853 SLC4A4Q9Y6R1 1079 aa16.41■□□□□ 0.22
PPP3CA-202ENST00000394853 ZNF804BA4D1E1 1349 aa16.41■□□□□ 0.22
PPP3CA-202ENST00000394853 NPR1P16066 1061 aa16.41■□□□□ 0.22
PPP3CA-202ENST00000394853 USP5P45974 858 aa16.41■□□□□ 0.22
PPP3CA-202ENST00000394853 ARHGAP27Q6ZUM4 889 aa16.41■□□□□ 0.22
PPP3CA-202ENST00000394853 MASTLQ96GX5 879 aa16.41■□□□□ 0.22
PPP3CA-202ENST00000394853 SPON1Q9HCB6 807 aa16.41■□□□□ 0.22
PPP3CA-202ENST00000394853 KRT85P78386 507 aa16.4■□□□□ 0.22
PPP3CA-202ENST00000394853 MB21D2Q8IYB1 491 aaPredicted RBP16.4■□□□□ 0.22
PPP3CA-202ENST00000394853 TTLL6Q8N841 843 aa16.4■□□□□ 0.22
PPP3CA-202ENST00000394853 SDR42E1Q8WUS8 393 aa16.4■□□□□ 0.22
PPP3CA-202ENST00000394853 EPB41L4AQ9HCS5 686 aaPredicted RBP16.4■□□□□ 0.22
PPP3CA-202ENST00000394853 SPEF2Q9C093 1822 aa16.4■□□□□ 0.22
PPP3CA-202ENST00000394853 ADGRA1Q86SQ6 560 aa16.4■□□□□ 0.22
PPP3CA-202ENST00000394853 TTC6Q86TZ1 520 aa16.4■□□□□ 0.22
PPP3CA-202ENST00000394853 IFNL3Q8IZI9 196 aa16.4■□□□□ 0.22
PPP3CA-202ENST00000394853 SENP2Q9HC62 589 aa16.4■□□□□ 0.22
PPP3CA-202ENST00000394853 GTF2IP78347 998 aa16.4■□□□□ 0.22
PPP3CA-202ENST00000394853 NAA16Q6N069 864 aaPredicted RBP16.4■□□□□ 0.22
PPP3CA-202ENST00000394853 CYB5R4Q7L1T6 521 aa16.4■□□□□ 0.22
PPP3CA-202ENST00000394853 ZKSCAN3Q9BRR0 538 aa16.4■□□□□ 0.22
PPP3CA-202ENST00000394853 MYL10Q9BUA6 226 aa16.39■□□□□ 0.21
PPP3CA-202ENST00000394853 GJB4Q9NTQ9 266 aa16.39■□□□□ 0.21
PPP3CA-202ENST00000394853 GJA3Q9Y6H8 435 aa16.39■□□□□ 0.21
PPP3CA-202ENST00000394853 SMIM22K7EJ46 135 aa16.39■□□□□ 0.21
PPP3CA-202ENST00000394853 UBE2HP62256 183 aa16.39■□□□□ 0.21
PPP3CA-202ENST00000394853 PDGFDQ9GZP0 370 aaPredicted RBP16.39■□□□□ 0.21
PPP3CA-202ENST00000394853 CPLX1O14810 134 aa16.39■□□□□ 0.21
PPP3CA-202ENST00000394853 LRSAM1Q6UWE0 723 aa16.39■□□□□ 0.21
PPP3CA-202ENST00000394853 FAM84BQ96KN1 310 aaPredicted RBP16.39■□□□□ 0.21
PPP3CA-202ENST00000394853 FTOQ9C0B1 505 aaKnown RBP eCLIP16.39■□□□□ 0.21
PPP3CA-202ENST00000394853 NEDD4P46934 1319 aa16.38■□□□□ 0.21
PPP3CA-202ENST00000394853 OGFOD1Q8N543 542 aa16.38■□□□□ 0.21
PPP3CA-202ENST00000394853 SYAP1Q96A49 352 aaPredicted RBP16.38■□□□□ 0.21
PPP3CA-202ENST00000394853 DDX60Q8IY21 1712 aaKnown RBP16.38■□□□□ 0.21
PPP3CA-202ENST00000394853 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms