RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 DHX40Q8IX18 779 aaKnown RBP18.04■□□□□ 0.48
PTBP1-204ENST00000394601 CLIC4Q9Y696 253 aa18.04■□□□□ 0.48
PTBP1-204ENST00000394601 KLF18A0A0U1RQI7 1052 aa18.03■□□□□ 0.48
PTBP1-204ENST00000394601 UBE3CQ15386 1083 aa18.03■□□□□ 0.48
PTBP1-204ENST00000394601 C10orf67Q8IYJ2 551 aa18.03■□□□□ 0.48
PTBP1-204ENST00000394601 NCOA7Q8NI08 942 aa18.03■□□□□ 0.48
PTBP1-204ENST00000394601 WWC3Q9ULE0 1092 aa18.03■□□□□ 0.48
PTBP1-204ENST00000394601 NRAPQ86VF7 1730 aa18.03■□□□□ 0.48
PTBP1-204ENST00000394601 BCL9LQ86UU0 1499 aa18.03■□□□□ 0.48
PTBP1-204ENST00000394601 ANKRD18BA2A2Z9 1011 aa18.03■□□□□ 0.48
PTBP1-204ENST00000394601 FAM160A1Q05DH4 1040 aa18.03■□□□□ 0.48
PTBP1-204ENST00000394601 FBXO38Q6PIJ6 1188 aa18.03■□□□□ 0.48
PTBP1-204ENST00000394601 NOL10Q9BSC4 688 aaKnown RBP18.03■□□□□ 0.48
PTBP1-204ENST00000394601 TOMM22Q9NS69 142 aa18.03■□□□□ 0.48
PTBP1-204ENST00000394601 PDE8AO60658 829 aa18.03■□□□□ 0.48
PTBP1-204ENST00000394601 HNRNPH2P55795 449 aaKnown RBP18.03■□□□□ 0.48
PTBP1-204ENST00000394601 TAF7LQ5H9L4 462 aa18.03■□□□□ 0.48
PTBP1-204ENST00000394601 SLC9C2Q5TAH2 1124 aa18.03■□□□□ 0.48
PTBP1-204ENST00000394601 SARM1Q6SZW1 724 aa18.03■□□□□ 0.48
PTBP1-204ENST00000394601 IL6STP40189 918 aaPredicted RBP18.02■□□□□ 0.48
PTBP1-204ENST00000394601 ZNF213O14771 459 aa18.02■□□□□ 0.48
PTBP1-204ENST00000394601 CAPN2P17655 700 aa18.02■□□□□ 0.48
PTBP1-204ENST00000394601 CCDC144BQ3MJ40 725 aa18.02■□□□□ 0.48
PTBP1-204ENST00000394601 ADALQ6DHV7 355 aa18.02■□□□□ 0.48
PTBP1-204ENST00000394601 INTS5Q6P9B9 1019 aaKnown RBP18.02■□□□□ 0.48
PTBP1-204ENST00000394601 RAB11FIP4Q86YS3 637 aa18.02■□□□□ 0.48
PTBP1-204ENST00000394601 CCDC144CPQ8IYA2 1237 aa18.02■□□□□ 0.48
PTBP1-204ENST00000394601 CACTINQ8WUQ7 758 aaKnown RBP18.02■□□□□ 0.48
PTBP1-204ENST00000394601 ZNF396Q96N95 335 aaPredicted RBP18.02■□□□□ 0.48
PTBP1-204ENST00000394601 POLR3EQ9NVU0 708 aa18.02■□□□□ 0.48
PTBP1-204ENST00000394601 ZNF532Q9HCE3 1301 aa18.01■□□□□ 0.47
PTBP1-204ENST00000394601 GOLGA8BA8MQT2 603 aa18.01■□□□□ 0.47
PTBP1-204ENST00000394601 PTPN14Q15678 1187 aa18.01■□□□□ 0.47
PTBP1-204ENST00000394601 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.01■□□□□ 0.47
PTBP1-204ENST00000394601 RGS22Q8NE09 1264 aa18.01■□□□□ 0.47
PTBP1-204ENST00000394601 TRMT112Q9UI30 125 aaKnown RBP18.01■□□□□ 0.47
PTBP1-204ENST00000394601 ROBO1Q9Y6N7 1651 aa18.01■□□□□ 0.47
PTBP1-204ENST00000394601 A0A1W2PQ27 194 aa18.01■□□□□ 0.47
PTBP1-204ENST00000394601 A0A1W2PQ64 194 aa18.01■□□□□ 0.47
PTBP1-204ENST00000394601 A0A1W2PQD8 194 aa18.01■□□□□ 0.47
PTBP1-204ENST00000394601 SH2B2O14492 632 aaPredicted RBP18.01■□□□□ 0.47
PTBP1-204ENST00000394601 PDE6AP16499 860 aa18.01■□□□□ 0.47
PTBP1-204ENST00000394601 ERCC6LQ2NKX8 1250 aa18.01■□□□□ 0.47
PTBP1-204ENST00000394601 EPB41L4AQ9HCS5 686 aaPredicted RBP18.01■□□□□ 0.47
PTBP1-204ENST00000394601 FAM217BQ9NTX9 383 aaPredicted RBP18.01■□□□□ 0.47
PTBP1-204ENST00000394601 TBC1D2BQ9UPU7 963 aa18.01■□□□□ 0.47
PTBP1-204ENST00000394601 SMTNL1A8MU46 457 aa18.01■□□□□ 0.47
PTBP1-204ENST00000394601 CTAGE5O15320 804 aa18.01■□□□□ 0.47
PTBP1-204ENST00000394601 CAVIN2O95810 425 aa18.01■□□□□ 0.47
PTBP1-204ENST00000394601 TPM3P06753 285 aa18.01■□□□□ 0.47
PTBP1-204ENST00000394601 NTRK3Q16288 839 aa18.01■□□□□ 0.47
PTBP1-204ENST00000394601 AXDND1Q5T1B0 1012 aaPredicted RBP18.01■□□□□ 0.47
PTBP1-204ENST00000394601 IGDCC4Q8TDY8 1250 aa18.01■□□□□ 0.47
PTBP1-204ENST00000394601 STRBPQ96SI9 672 aaKnown RBP18.01■□□□□ 0.47
PTBP1-204ENST00000394601 SNAP23O00161 211 aa18■□□□□ 0.47
PTBP1-204ENST00000394601 CDC25BP30305 580 aa18■□□□□ 0.47
PTBP1-204ENST00000394601 EIF5P55010 431 aaKnown RBP18■□□□□ 0.47
PTBP1-204ENST00000394601 GABPB1Q06547 395 aaPredicted RBP18■□□□□ 0.47
PTBP1-204ENST00000394601 ZMYM6O95789 1325 aa18■□□□□ 0.47
PTBP1-204ENST00000394601 CDC27P30260 824 aa18■□□□□ 0.47
PTBP1-204ENST00000394601 NDUFA8P51970 172 aa18■□□□□ 0.47
PTBP1-204ENST00000394601 KIF23Q02241 960 aaPredicted RBP18■□□□□ 0.47
PTBP1-204ENST00000394601 CCAR2Q8N163 923 aaKnown RBP18■□□□□ 0.47
PTBP1-204ENST00000394601 ZCCHC17Q9NP64 241 aaKnown RBP18■□□□□ 0.47
PTBP1-204ENST00000394601 INCENPQ9NQS7 918 aa18■□□□□ 0.47
PTBP1-204ENST00000394601 CNNM1Q9NRU3 951 aa18■□□□□ 0.47
PTBP1-204ENST00000394601 KAT6BQ8WYB5 2073 aa18■□□□□ 0.47
PTBP1-204ENST00000394601 MYSM1Q5VVJ2 828 aa17.99■□□□□ 0.47
PTBP1-204ENST00000394601 ZSCAN25Q6NSZ9 544 aa17.99■□□□□ 0.47
PTBP1-204ENST00000394601 DZIP3Q86Y13 1208 aaKnown RBP17.99■□□□□ 0.47
PTBP1-204ENST00000394601 AIFM3Q96NN9 605 aa17.99■□□□□ 0.47
PTBP1-204ENST00000394601 AHDC1Q5TGY3 1603 aaPredicted RBP17.99■□□□□ 0.47
PTBP1-204ENST00000394601 GOLGA6L19H0YKK7 550 aa17.99■□□□□ 0.47
PTBP1-204ENST00000394601 GYS2P54840 703 aa17.99■□□□□ 0.47
PTBP1-204ENST00000394601 TTF1Q15361 905 aaPredicted RBP17.99■□□□□ 0.47
PTBP1-204ENST00000394601 SUSD4Q5VX71 490 aa17.99■□□□□ 0.47
PTBP1-204ENST00000394601 FSIP1Q8NA03 581 aa17.99■□□□□ 0.47
PTBP1-204ENST00000394601 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.99■□□□□ 0.475e-9■□□□□ 10.2
PTBP1-204ENST00000394601 ALX1Q15699 326 aa17.99■□□□□ 0.47
PTBP1-204ENST00000394601 C8orf76Q96K31 380 aa17.99■□□□□ 0.47
PTBP1-204ENST00000394601 CALCOCO1Q9P1Z2 691 aa17.99■□□□□ 0.47
PTBP1-204ENST00000394601 ORC3Q9UBD5 711 aaPredicted RBP17.99■□□□□ 0.47
PTBP1-204ENST00000394601 COL5A3P25940 1745 aaPredicted RBP17.98■□□□□ 0.47
PTBP1-204ENST00000394601 CTIFO43310 598 aaKnown RBP17.98■□□□□ 0.47
PTBP1-204ENST00000394601 POLR3DP05423 398 aaPredicted RBP17.98■□□□□ 0.47
PTBP1-204ENST00000394601 GNL2Q13823 731 aaKnown RBP17.98■□□□□ 0.47
PTBP1-204ENST00000394601 PUM3Q15397 648 aaKnown RBP17.98■□□□□ 0.47
PTBP1-204ENST00000394601 STX1AQ16623 288 aa17.98■□□□□ 0.47
PTBP1-204ENST00000394601 LPIN2Q92539 896 aa17.98■□□□□ 0.47
PTBP1-204ENST00000394601 ANGEL1Q9UNK9 670 aaKnown RBP17.98■□□□□ 0.47
PTBP1-204ENST00000394601 A0A1B0GVL5 298 aa17.98■□□□□ 0.47
PTBP1-204ENST00000394601 ME1P48163 572 aa17.98■□□□□ 0.47
PTBP1-204ENST00000394601 IRX3P78415 501 aaPredicted RBP17.98■□□□□ 0.47
PTBP1-204ENST00000394601 RASGRF1Q13972 1273 aa17.98■□□□□ 0.47
PTBP1-204ENST00000394601 HOMER1Q86YM7 354 aa17.98■□□□□ 0.47
PTBP1-204ENST00000394601 HELBQ8NG08 1087 aaPredicted RBP17.98■□□□□ 0.47
PTBP1-204ENST00000394601 AK7Q96M32 723 aa17.98■□□□□ 0.47
PTBP1-204ENST00000394601 LY9Q9HBG7 655 aa17.98■□□□□ 0.47
PTBP1-204ENST00000394601 MROH5Q6ZUA9 1318 aa17.98■□□□□ 0.47
PTBP1-204ENST00000394601 YEATS4O95619 227 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms