RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 PARP1P09874 1014 aaKnown RBP10.39□□□□□ -0.75
CDH11-202ENST00000394156 TRIM21P19474 475 aaKnown RBP10.39□□□□□ -0.75
CDH11-202ENST00000394156 JDP2Q8WYK2 163 aa10.39□□□□□ -0.75
CDH11-202ENST00000394156 DBNDD1Q9H9R9 158 aa10.39□□□□□ -0.75
CDH11-202ENST00000394156 SPICE1Q8N0Z3 855 aa10.39□□□□□ -0.75
CDH11-202ENST00000394156 LARGE2Q8N3Y3 721 aa10.39□□□□□ -0.75
CDH11-202ENST00000394156 ARHGEF10O15013 1369 aa10.39□□□□□ -0.75
CDH11-202ENST00000394156 NLRP1Q9C000 1473 aa10.39□□□□□ -0.75
CDH11-202ENST00000394156 E7EWF7 191 aa10.39□□□□□ -0.75
CDH11-202ENST00000394156 UBXN2AP68543 259 aa10.39□□□□□ -0.75
CDH11-202ENST00000394156 SETQ01105 290 aaPredicted RBP10.39□□□□□ -0.75
CDH11-202ENST00000394156 SEPT7Q16181 437 aaKnown RBP10.39□□□□□ -0.75
CDH11-202ENST00000394156 GLI2P10070 1586 aa10.39□□□□□ -0.75
CDH11-202ENST00000394156 SPATA31E1Q6ZUB1 1445 aa10.39□□□□□ -0.75
CDH11-202ENST00000394156 NEBLO76041 1014 aa10.39□□□□□ -0.75
CDH11-202ENST00000394156 ZFYP08048 801 aaPredicted RBP10.39□□□□□ -0.75
CDH11-202ENST00000394156 PPP4R3AQ6IN85 833 aa10.39□□□□□ -0.75
CDH11-202ENST00000394156 MRVI1Q9Y6F6 885 aa10.39□□□□□ -0.75
CDH11-202ENST00000394156 H0YIN7 160 aa10.39□□□□□ -0.75
CDH11-202ENST00000394156 SF3A3Q12874 501 aaKnown RBP eCLIP10.39□□□□□ -0.75
CDH11-202ENST00000394156 CEP135Q66GS9 1140 aa10.39□□□□□ -0.75
CDH11-202ENST00000394156 PGBD1Q96JS3 809 aa10.39□□□□□ -0.75
CDH11-202ENST00000394156 HINFPQ9BQA5 517 aa10.39□□□□□ -0.75
CDH11-202ENST00000394156 VPS16Q9H269 839 aa10.39□□□□□ -0.75
CDH11-202ENST00000394156 CNNM2Q9H8M5 875 aa10.39□□□□□ -0.75
CDH11-202ENST00000394156 PRKAB2O43741 272 aa10.38□□□□□ -0.75
CDH11-202ENST00000394156 KIF5CO60282 957 aa10.38□□□□□ -0.75
CDH11-202ENST00000394156 TRMT44Q8IYL2 757 aaKnown RBP10.38□□□□□ -0.75
CDH11-202ENST00000394156 SYNMO15061 1565 aa10.38□□□□□ -0.75
CDH11-202ENST00000394156 ARAP3Q8WWN8 1544 aa10.38□□□□□ -0.75
CDH11-202ENST00000394156 H0YHG0 523 aa10.38□□□□□ -0.75
CDH11-202ENST00000394156 CHRNDQ07001 517 aa10.38□□□□□ -0.75
CDH11-202ENST00000394156 MRPS27Q92552 414 aaKnown RBP10.38□□□□□ -0.75
CDH11-202ENST00000394156 DDX19AQ9NUU7 478 aaKnown RBP10.38□□□□□ -0.75
CDH11-202ENST00000394156 SPDYE3A6NKU9 549 aa10.38□□□□□ -0.75
CDH11-202ENST00000394156 TAF4BQ92750 862 aa10.38□□□□□ -0.75
CDH11-202ENST00000394156 CROCC2H7BZ55 1655 aa10.38□□□□□ -0.75
CDH11-202ENST00000394156 POLD1P28340 1107 aa10.38□□□□□ -0.75
CDH11-202ENST00000394156 BEND3Q5T5X7 828 aa10.38□□□□□ -0.75
CDH11-202ENST00000394156 CCDC12Q8WUD4 166 aaPredicted RBP10.38□□□□□ -0.75
CDH11-202ENST00000394156 ADCY10Q96PN6 1610 aa10.38□□□□□ -0.75
CDH11-202ENST00000394156 UBXN1Q04323 297 aa10.38□□□□□ -0.75
CDH11-202ENST00000394156 FAM196AQ6ZSG2 479 aa10.38□□□□□ -0.75
CDH11-202ENST00000394156 TTF2Q9UNY4 1162 aaKnown RBP10.38□□□□□ -0.75
CDH11-202ENST00000394156 RAB34Q9BZG1 259 aa10.37□□□□□ -0.75
CDH11-202ENST00000394156 FTOQ9C0B1 505 aaKnown RBP eCLIP10.37□□□□□ -0.75
CDH11-202ENST00000394156 SNW1Q13573 536 aaKnown RBP10.37□□□□□ -0.75
CDH11-202ENST00000394156 PDCL2Q8N4E4 241 aa10.37□□□□□ -0.75
CDH11-202ENST00000394156 MAP7D2Q96T17 732 aa10.37□□□□□ -0.75
CDH11-202ENST00000394156 PPIP5K2O43314 1243 aa10.37□□□□□ -0.75
CDH11-202ENST00000394156 PPP1R12BO60237 982 aaPredicted RBP10.37□□□□□ -0.75
CDH11-202ENST00000394156 GNG11P61952 73 aa10.37□□□□□ -0.75
CDH11-202ENST00000394156 PNOCQ13519 176 aa10.37□□□□□ -0.75
CDH11-202ENST00000394156 NKX1-1Q15270 411 aaPredicted RBP10.37□□□□□ -0.75
CDH11-202ENST00000394156 KLHL40Q2TBA0 621 aa10.37□□□□□ -0.75
CDH11-202ENST00000394156 CCDC148Q8NFR7 591 aa10.37□□□□□ -0.75
CDH11-202ENST00000394156 ZSCAN16Q9H4T2 348 aaPredicted RBP10.37□□□□□ -0.75
CDH11-202ENST00000394156 LOC102724428A0A0B4J2F2 783 aa10.37□□□□□ -0.75
CDH11-202ENST00000394156 TBCAO75347 108 aaKnown RBP10.37□□□□□ -0.75
CDH11-202ENST00000394156 SIK1P57059 783 aa10.37□□□□□ -0.75
CDH11-202ENST00000394156 UBXN4Q92575 508 aa10.37□□□□□ -0.75
CDH11-202ENST00000394156 CLIC6Q96NY7 704 aa10.37□□□□□ -0.75
CDH11-202ENST00000394156 USP17L12C9JPN9 530 aa10.37□□□□□ -0.75
CDH11-202ENST00000394156 USP17L21D6R901 530 aa10.37□□□□□ -0.75
CDH11-202ENST00000394156 CCP110O43303 1012 aa10.37□□□□□ -0.75
CDH11-202ENST00000394156 CHGBP05060 677 aa10.37□□□□□ -0.75
CDH11-202ENST00000394156 PPM1FP49593 454 aaPredicted RBP10.37□□□□□ -0.75
CDH11-202ENST00000394156 TCIRG1Q13488 830 aa10.37□□□□□ -0.75
CDH11-202ENST00000394156 NCAPH2Q6IBW4 605 aa10.37□□□□□ -0.75
CDH11-202ENST00000394156 PROCA1Q8NCQ7 364 aaPredicted RBP10.37□□□□□ -0.75
CDH11-202ENST00000394156 DENND2AQ9ULE3 1009 aa10.37□□□□□ -0.75
CDH11-202ENST00000394156 TPCN1Q9ULQ1 816 aa10.37□□□□□ -0.75
CDH11-202ENST00000394156 ADD1P35611 737 aaKnown RBP10.37□□□□□ -0.75
CDH11-202ENST00000394156 SGSM2O43147 1006 aa10.36□□□□□ -0.75
CDH11-202ENST00000394156 KCNQ2O43526 872 aa10.36□□□□□ -0.75
CDH11-202ENST00000394156 RDH13Q8NBN7 331 aa10.36□□□□□ -0.75
CDH11-202ENST00000394156 PSMB7Q99436 277 aa10.36□□□□□ -0.75
CDH11-202ENST00000394156 USP40Q9NVE5 1235 aa10.36□□□□□ -0.75
CDH11-202ENST00000394156 STK32BQ9NY57 414 aa10.36□□□□□ -0.75
CDH11-202ENST00000394156 SMIM23A6NLE4 172 aa10.36□□□□□ -0.75
CDH11-202ENST00000394156 TFAP4Q01664 338 aa10.36□□□□□ -0.75
CDH11-202ENST00000394156 PPP4R3BQ5MIZ7 849 aa10.36□□□□□ -0.75
CDH11-202ENST00000394156 MFSD14BQ5SR56 506 aa10.36□□□□□ -0.75
CDH11-202ENST00000394156 MYOM2P54296 1465 aa10.36□□□□□ -0.75
CDH11-202ENST00000394156 MAP3K4Q9Y6R4 1608 aa10.36□□□□□ -0.75
CDH11-202ENST00000394156 HLTFQ14527 1009 aaKnown RBP eCLIP10.36□□□□□ -0.75
CDH11-202ENST00000394156 PIGBQ92521 554 aa10.36□□□□□ -0.75
CDH11-202ENST00000394156 TCHPQ9BT92 498 aa10.36□□□□□ -0.75
CDH11-202ENST00000394156 HELLSQ9NRZ9 838 aa10.36□□□□□ -0.75
CDH11-202ENST00000394156 GOLGA6L10A6NI86 522 aa10.36□□□□□ -0.75
CDH11-202ENST00000394156 GOLGA8FQ08AF8 430 aa10.36□□□□□ -0.75
CDH11-202ENST00000394156 GOLGA8DPQ0D2H9 430 aa10.36□□□□□ -0.75
CDH11-202ENST00000394156 TRIM75PA6NK02 468 aa10.36□□□□□ -0.75
CDH11-202ENST00000394156 DTHD1Q6ZMT9 781 aa10.36□□□□□ -0.75
CDH11-202ENST00000394156 RASGRP4Q8TDF6 673 aa10.36□□□□□ -0.75
CDH11-202ENST00000394156 ACBD3Q9H3P7 528 aa10.36□□□□□ -0.75
CDH11-202ENST00000394156 DNAI1Q9UI46 699 aa10.36□□□□□ -0.75
CDH11-202ENST00000394156 NEO1Q92859 1461 aa10.35□□□□□ -0.75
CDH11-202ENST00000394156 NPHP4O75161 1426 aaPredicted RBP10.35□□□□□ -0.75
CDH11-202ENST00000394156 CACNB3P54284 484 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms