RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 PHKA1P46020 1223 aa16.13■□□□□ 0.17
GAPVD1-205ENST00000394084 PNOCQ13519 176 aa16.13■□□□□ 0.17
GAPVD1-205ENST00000394084 TTLL11Q8NHH1 800 aa16.13■□□□□ 0.17
GAPVD1-205ENST00000394084 IMPACTQ9P2X3 320 aa16.13■□□□□ 0.17
GAPVD1-205ENST00000394084 UBR2Q8IWV8 1755 aa16.13■□□□□ 0.17
GAPVD1-205ENST00000394084 EVA1CP58658 441 aa16.13■□□□□ 0.17
GAPVD1-205ENST00000394084 FANCCQ00597 558 aa16.13■□□□□ 0.17
GAPVD1-205ENST00000394084 APOA5Q6Q788 366 aa16.13■□□□□ 0.17
GAPVD1-205ENST00000394084 SHC4Q6S5L8 630 aa16.13■□□□□ 0.17
GAPVD1-205ENST00000394084 STK11IPQ8N1F8 1099 aa16.13■□□□□ 0.17
GAPVD1-205ENST00000394084 BPIFA3Q9BQP9 254 aa16.13■□□□□ 0.17
GAPVD1-205ENST00000394084 ANKRD18BA2A2Z9 1011 aa16.12■□□□□ 0.17
GAPVD1-205ENST00000394084 TRIM28Q13263 835 aaKnown RBP16.12■□□□□ 0.17
GAPVD1-205ENST00000394084 ELF2Q15723 593 aa16.12■□□□□ 0.17
GAPVD1-205ENST00000394084 PPP1R13BQ96KQ4 1090 aa16.12■□□□□ 0.17
GAPVD1-205ENST00000394084 SPECC1Q5M775 1068 aa16.12■□□□□ 0.17
GAPVD1-205ENST00000394084 SYT10Q6XYQ8 523 aa16.12■□□□□ 0.17
GAPVD1-205ENST00000394084 BRINP3Q76B58 766 aa16.12■□□□□ 0.17
GAPVD1-205ENST00000394084 NLRP10Q86W26 655 aa16.12■□□□□ 0.17
GAPVD1-205ENST00000394084 CCDC150Q8NCX0 1101 aa16.12■□□□□ 0.17
GAPVD1-205ENST00000394084 DPF2Q92785 391 aa16.12■□□□□ 0.17
GAPVD1-205ENST00000394084 PLA2G12BQ9BX93 195 aa16.12■□□□□ 0.17
GAPVD1-205ENST00000394084 GOLGA8AA7E2F4 631 aa16.11■□□□□ 0.17
GAPVD1-205ENST00000394084 ZBTB43O43298 467 aa16.11■□□□□ 0.17
GAPVD1-205ENST00000394084 PDE6AP16499 860 aa16.11■□□□□ 0.17
GAPVD1-205ENST00000394084 GOLGA8FQ08AF8 430 aa16.11■□□□□ 0.17
GAPVD1-205ENST00000394084 GOLGA8DPQ0D2H9 430 aa16.11■□□□□ 0.17
GAPVD1-205ENST00000394084 CPLX2Q6PUV4 134 aaKnown RBP16.11■□□□□ 0.17
GAPVD1-205ENST00000394084 PIGBQ92521 554 aa16.11■□□□□ 0.17
GAPVD1-205ENST00000394084 FEZ1Q99689 392 aa16.11■□□□□ 0.17
GAPVD1-205ENST00000394084 SNAP23O00161 211 aa16.11■□□□□ 0.17
GAPVD1-205ENST00000394084 RANBP6O60518 1105 aaKnown RBP16.11■□□□□ 0.17
GAPVD1-205ENST00000394084 IARSP41252 1262 aaKnown RBP16.11■□□□□ 0.17
GAPVD1-205ENST00000394084 CTDSPL2Q05D32 466 aa16.11■□□□□ 0.17
GAPVD1-205ENST00000394084 HSP90AA4PQ58FG1 418 aa16.11■□□□□ 0.17
GAPVD1-205ENST00000394084 TMEM67Q5HYA8 995 aa16.11■□□□□ 0.17
GAPVD1-205ENST00000394084 CCDC102BQ68D86 513 aa16.11■□□□□ 0.17
GAPVD1-205ENST00000394084 AIDAQ96BJ3 306 aa16.11■□□□□ 0.17
GAPVD1-205ENST00000394084 OGFRQ9NZT2 677 aa16.11■□□□□ 0.17
GAPVD1-205ENST00000394084 TNS2Q63HR2 1409 aa16.1■□□□□ 0.17
GAPVD1-205ENST00000394084 IRS4O14654 1257 aaPredicted RBP16.1■□□□□ 0.17
GAPVD1-205ENST00000394084 CDKL5O76039 1030 aa16.1■□□□□ 0.17
GAPVD1-205ENST00000394084 CTSWP56202 376 aa16.1■□□□□ 0.17
GAPVD1-205ENST00000394084 GIGYF2Q6Y7W6 1299 aaKnown RBP16.1■□□□□ 0.17
GAPVD1-205ENST00000394084 CARD10Q9BWT7 1032 aa16.1■□□□□ 0.17
GAPVD1-205ENST00000394084 SLC26A6Q9BXS9 759 aa16.1■□□□□ 0.17
GAPVD1-205ENST00000394084 TRMT112Q9UI30 125 aaKnown RBP16.1■□□□□ 0.17
GAPVD1-205ENST00000394084 COL5A2P05997 1499 aaPredicted RBP16.1■□□□□ 0.17
GAPVD1-205ENST00000394084 MAP3K15Q6ZN16 1313 aa16.1■□□□□ 0.17
GAPVD1-205ENST00000394084 WDR19Q8NEZ3 1342 aa16.1■□□□□ 0.17
GAPVD1-205ENST00000394084 SERPINC1P01008 464 aa16.1■□□□□ 0.17
GAPVD1-205ENST00000394084 TRIM29Q14134 588 aa16.1■□□□□ 0.17
GAPVD1-205ENST00000394084 PTPAQ15257 358 aa16.1■□□□□ 0.17
GAPVD1-205ENST00000394084 KMT5BQ4FZB7 885 aa16.1■□□□□ 0.17
GAPVD1-205ENST00000394084 HSD3B7Q9H2F3 369 aa16.1■□□□□ 0.17
GAPVD1-205ENST00000394084 TBC1D2BQ9UPU7 963 aa16.1■□□□□ 0.17
GAPVD1-205ENST00000394084 STRCP1A6NGW2 1772 aa16.1■□□□□ 0.17
GAPVD1-205ENST00000394084 KAT6BQ8WYB5 2073 aa16.1■□□□□ 0.17
GAPVD1-205ENST00000394084 CCDC82Q8N4S0 544 aa16.1■□□□□ 0.17
GAPVD1-205ENST00000394084 TOMM22Q9NS69 142 aa16.1■□□□□ 0.17
GAPVD1-205ENST00000394084 SLU7O95391 586 aaKnown RBP16.09■□□□□ 0.17
GAPVD1-205ENST00000394084 STARD3NLO95772 234 aa16.09■□□□□ 0.17
GAPVD1-205ENST00000394084 TTF1Q15361 905 aaPredicted RBP16.09■□□□□ 0.17
GAPVD1-205ENST00000394084 CFAP100Q494V2 611 aa16.09■□□□□ 0.17
GAPVD1-205ENST00000394084 RRP12Q5JTH9 1297 aaKnown RBP16.09■□□□□ 0.17
GAPVD1-205ENST00000394084 JMYQ8N9B5 988 aa16.09■□□□□ 0.17
GAPVD1-205ENST00000394084 C4AP0C0L4 1744 aa16.09■□□□□ 0.17
GAPVD1-205ENST00000394084 C4BP0C0L5 1744 aa16.09■□□□□ 0.17
GAPVD1-205ENST00000394084 FOXN1O15353 648 aa16.09■□□□□ 0.17
GAPVD1-205ENST00000394084 PDE8BO95263 885 aa16.09■□□□□ 0.17
GAPVD1-205ENST00000394084 UBASH3AP57075 661 aa16.09■□□□□ 0.17
GAPVD1-205ENST00000394084 LONRF3Q496Y0 759 aa16.09■□□□□ 0.17
GAPVD1-205ENST00000394084 UTP14CQ5TAP6 766 aaKnown RBP16.09■□□□□ 0.17
GAPVD1-205ENST00000394084 HOMER1Q86YM7 354 aa16.09■□□□□ 0.17
GAPVD1-205ENST00000394084 IGDCC4Q8TDY8 1250 aa16.09■□□□□ 0.17
GAPVD1-205ENST00000394084 ERO1AQ96HE7 468 aa16.09■□□□□ 0.17
GAPVD1-205ENST00000394084 ZKSCAN3Q9BRR0 538 aa16.09■□□□□ 0.17
GAPVD1-205ENST00000394084 HPSEQ9Y251 543 aa16.09■□□□□ 0.17
GAPVD1-205ENST00000394084 ABCC12Q96J65 1359 aa16.09■□□□□ 0.17
GAPVD1-205ENST00000394084 DCCP43146 1447 aa16.09■□□□□ 0.17
GAPVD1-205ENST00000394084 MYO5AQ9Y4I1 1855 aaKnown RBP16.08■□□□□ 0.17
GAPVD1-205ENST00000394084 IFIT3O14879 490 aaKnown RBP16.08■□□□□ 0.17
GAPVD1-205ENST00000394084 UBE3CQ15386 1083 aa16.08■□□□□ 0.17
GAPVD1-205ENST00000394084 VGLL2Q8N8G2 317 aa16.08■□□□□ 0.17
GAPVD1-205ENST00000394084 LRRN4CLQ8ND94 238 aa16.08■□□□□ 0.17
GAPVD1-205ENST00000394084 MAP3K14Q99558 947 aa16.08■□□□□ 0.17
GAPVD1-205ENST00000394084 LY9Q9HBG7 655 aa16.08■□□□□ 0.17
GAPVD1-205ENST00000394084 FAM217BQ9NTX9 383 aaPredicted RBP16.08■□□□□ 0.17
GAPVD1-205ENST00000394084 UBN2Q6ZU65 1347 aa16.08■□□□□ 0.17
GAPVD1-205ENST00000394084 MYH7P12883 1935 aa16.08■□□□□ 0.16
GAPVD1-205ENST00000394084 NTRK3Q16288 839 aa16.08■□□□□ 0.16
GAPVD1-205ENST00000394084 FBXO38Q6PIJ6 1188 aa16.08■□□□□ 0.16
GAPVD1-205ENST00000394084 ZNF397Q8NF99 534 aaPredicted RBP16.08■□□□□ 0.16
GAPVD1-205ENST00000394084 STRBPQ96SI9 672 aaKnown RBP16.08■□□□□ 0.16
GAPVD1-205ENST00000394084 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.08■□□□□ 0.16
GAPVD1-205ENST00000394084 ARMT1Q9H993 441 aa16.08■□□□□ 0.16
GAPVD1-205ENST00000394084 TUBE1Q9UJT0 475 aa16.08■□□□□ 0.16
GAPVD1-205ENST00000394084 DDX41Q9UJV9 622 aaKnown RBP16.08■□□□□ 0.16
GAPVD1-205ENST00000394084 AKAP11Q9UKA4 1901 aa16.08■□□□□ 0.16
GAPVD1-205ENST00000394084 TMEM232C9JQI7 657 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms