RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 TMOD2Q9NZR1 351 aa22.67■■□□□ 1.22
PDLIM7-205ENST00000393551 DENND2AQ9ULE3 1009 aa22.67■■□□□ 1.22
PDLIM7-205ENST00000393551 RPAP1Q9BWH6 1393 aaPredicted RBP22.66■■□□□ 1.22
PDLIM7-205ENST00000393551 SEMA3EO15041 775 aa22.66■■□□□ 1.22
PDLIM7-205ENST00000393551 CAP1Q01518 475 aa22.66■■□□□ 1.22
PDLIM7-205ENST00000393551 NFIAQ12857 509 aa22.66■■□□□ 1.22
PDLIM7-205ENST00000393551 RASGRF1Q13972 1273 aa22.66■■□□□ 1.22
PDLIM7-205ENST00000393551 BRI3BPQ8WY22 251 aa22.66■■□□□ 1.22
PDLIM7-205ENST00000393551 SNCAIPQ9Y6H5 919 aa22.66■■□□□ 1.22
PDLIM7-205ENST00000393551 BRCA2P51587 3418 aa22.65■■□□□ 1.22
PDLIM7-205ENST00000393551 PNMA6EA0A0J9YXQ4 647 aa22.65■■□□□ 1.22
PDLIM7-205ENST00000393551 A0A1B0GUL7 405 aa22.65■■□□□ 1.22
PDLIM7-205ENST00000393551 LDHBP07195 334 aaKnown RBP22.65■■□□□ 1.22
PDLIM7-205ENST00000393551 ZKSCAN4Q969J2 545 aaPredicted RBP22.65■■□□□ 1.22
PDLIM7-205ENST00000393551 FAM198AQ9UFP1 575 aa22.65■■□□□ 1.22
PDLIM7-205ENST00000393551 AK9Q5TCS8 1911 aa22.65■■□□□ 1.22
PDLIM7-205ENST00000393551 MIGA2Q7L4E1 593 aa22.64■■□□□ 1.21
PDLIM7-205ENST00000393551 TMEM57Q8N5G2 664 aa22.64■■□□□ 1.21
PDLIM7-205ENST00000393551 FAM151AQ8WW52 585 aa22.64■■□□□ 1.21
PDLIM7-205ENST00000393551 OTUD5Q96G74 571 aa22.64■■□□□ 1.21
PDLIM7-205ENST00000393551 XAGE2Q96GT9 111 aa22.64■■□□□ 1.21
PDLIM7-205ENST00000393551 WRNIP1Q96S55 665 aa22.64■■□□□ 1.21
PDLIM7-205ENST00000393551 CSADQ9Y600 493 aa22.64■■□□□ 1.21
PDLIM7-205ENST00000393551 SPDYE5A6NIY4 337 aa22.63■■□□□ 1.21
PDLIM7-205ENST00000393551 GNAI2P04899 355 aa22.63■■□□□ 1.21
PDLIM7-205ENST00000393551 HNRNPUQ00839 825 aaKnown RBP eCLIP22.63■■□□□ 1.21
PDLIM7-205ENST00000393551 TCP10Q12799 353 aa22.63■■□□□ 1.21
PDLIM7-205ENST00000393551 FBXO46Q6PJ61 603 aaPredicted RBP22.63■■□□□ 1.21
PDLIM7-205ENST00000393551 ZFPM1Q8IX07 1006 aa22.63■■□□□ 1.21
PDLIM7-205ENST00000393551 PDE4DIPQ5VU43 2346 aa22.62■■□□□ 1.21
PDLIM7-205ENST00000393551 CCL15-CCL14A0A0B4J2E2 113 aa22.62■■□□□ 1.21
PDLIM7-205ENST00000393551 CCL15Q16663 113 aa22.62■■□□□ 1.21
PDLIM7-205ENST00000393551 OTUD7BQ6GQQ9 843 aa22.62■■□□□ 1.21
PDLIM7-205ENST00000393551 FAM43AQ8N2R8 423 aa22.62■■□□□ 1.21
PDLIM7-205ENST00000393551 MKI67P46013 3256 aaKnown RBP22.62■■□□□ 1.21
PDLIM7-205ENST00000393551 GAKO14976 1311 aa22.61■■□□□ 1.21
PDLIM7-205ENST00000393551 PDS5AQ29RF7 1337 aaKnown RBP22.61■■□□□ 1.21
PDLIM7-205ENST00000393551 INPP5BP32019 993 aa22.61■■□□□ 1.21
PDLIM7-205ENST00000393551 GTF2A2P52657 109 aa22.61■■□□□ 1.21
PDLIM7-205ENST00000393551 DIEXFQ68CQ4 756 aaKnown RBP22.61■■□□□ 1.21
PDLIM7-205ENST00000393551 OTOP1Q7RTM1 612 aa22.61■■□□□ 1.21
PDLIM7-205ENST00000393551 USP40Q9NVE5 1235 aa22.61■■□□□ 1.21
PDLIM7-205ENST00000393551 IRF6O14896 467 aa22.6■■□□□ 1.21
PDLIM7-205ENST00000393551 ZKSCAN2Q63HK3 967 aa22.6■■□□□ 1.21
PDLIM7-205ENST00000393551 ERO1BQ86YB8 467 aa22.6■■□□□ 1.21
PDLIM7-205ENST00000393551 ZNF384Q8TF68 577 aa22.6■■□□□ 1.21
PDLIM7-205ENST00000393551 ZNF112Q9UJU3 913 aa22.6■■□□□ 1.21
PDLIM7-205ENST00000393551 AKAP2Q9Y2D5 859 aa22.6■■□□□ 1.21
PDLIM7-205ENST00000393551 TRIM17Q9Y577 477 aa22.6■■□□□ 1.21
PDLIM7-205ENST00000393551 PI16Q6UXB8 463 aa22.59■■□□□ 1.21
PDLIM7-205ENST00000393551 CD99L2Q8TCZ2 262 aa22.59■■□□□ 1.21
PDLIM7-205ENST00000393551 HOOK2Q96ED9 719 aa22.59■■□□□ 1.21
PDLIM7-205ENST00000393551 ZNF341Q9BYN7 854 aa22.59■■□□□ 1.21
PDLIM7-205ENST00000393551 RFX7Q2KHR2 1363 aa22.59■■□□□ 1.21
PDLIM7-205ENST00000393551 DCAF15Q66K64 600 aa22.58■■□□□ 1.21
PDLIM7-205ENST00000393551 ZGPATQ8N5A5 531 aaKnown RBP22.58■■□□□ 1.21
PDLIM7-205ENST00000393551 NEUROD6Q96NK8 337 aa22.58■■□□□ 1.21
PDLIM7-205ENST00000393551 HMG20BQ9P0W2 317 aa22.58■■□□□ 1.21
PDLIM7-205ENST00000393551 ABCF2Q9UG63 623 aa22.58■■□□□ 1.21
PDLIM7-205ENST00000393551 ATRNL1Q5VV63 1379 aa22.58■■□□□ 1.21
PDLIM7-205ENST00000393551 DOCK2Q92608 1830 aa22.57■■□□□ 1.2
PDLIM7-205ENST00000393551 RLBP1P12271 317 aa22.57■■□□□ 1.2
PDLIM7-205ENST00000393551 SP3Q02447 781 aa22.57■■□□□ 1.2
PDLIM7-205ENST00000393551 PPIL2Q13356 520 aa22.57■■□□□ 1.2
PDLIM7-205ENST00000393551 POLA2Q14181 598 aa22.57■■□□□ 1.2
PDLIM7-205ENST00000393551 MVPQ14764 893 aaKnown RBP22.57■■□□□ 1.2
PDLIM7-205ENST00000393551 SH3BP5LQ7L8J4 393 aa22.57■■□□□ 1.2
PDLIM7-205ENST00000393551 FAM163AQ96GL9 167 aaPredicted RBP22.57■■□□□ 1.2
PDLIM7-205ENST00000393551 IDI2Q9BXS1 227 aa22.57■■□□□ 1.2
PDLIM7-205ENST00000393551 RGS3P49796 1198 aa22.56■■□□□ 1.2
PDLIM7-205ENST00000393551 TAF1CQ15572 869 aaPredicted RBP22.56■■□□□ 1.2
PDLIM7-205ENST00000393551 ERO1AQ96HE7 468 aa22.56■■□□□ 1.2
PDLIM7-205ENST00000393551 ZSWIM8A7E2V4 1837 aa22.55■■□□□ 1.2
PDLIM7-205ENST00000393551 BTBD19C9JJ37 291 aa22.55■■□□□ 1.2
PDLIM7-205ENST00000393551 WDHD1O75717 1129 aaPredicted RBP22.55■■□□□ 1.2
PDLIM7-205ENST00000393551 SLURP2P0DP57 97 aa22.55■■□□□ 1.2
PDLIM7-205ENST00000393551 MECOMQ03112 1051 aa22.55■■□□□ 1.2
PDLIM7-205ENST00000393551 TBC1D9Q6ZT07 1266 aa22.55■■□□□ 1.2
PDLIM7-205ENST00000393551 DZIP1Q86YF9 867 aaKnown RBP22.55■■□□□ 1.2
PDLIM7-205ENST00000393551 C1orf115Q9H7X2 142 aa22.55■■□□□ 1.2
PDLIM7-205ENST00000393551 DDX4Q9NQI0 724 aaKnown RBP22.55■■□□□ 1.2
PDLIM7-205ENST00000393551 CETPP11597 493 aa22.54■■□□□ 1.2
PDLIM7-205ENST00000393551 ARID4AP29374 1257 aaPredicted RBP22.54■■□□□ 1.2
PDLIM7-205ENST00000393551 PPATQ06203 517 aa22.54■■□□□ 1.2
PDLIM7-205ENST00000393551 G3BP1Q13283 466 aaKnown RBP eCLIP22.54■■□□□ 1.2
PDLIM7-205ENST00000393551 SNAPC2Q13487 334 aa22.54■■□□□ 1.2
PDLIM7-205ENST00000393551 SSH3Q8TE77 659 aa22.54■■□□□ 1.2
PDLIM7-205ENST00000393551 ZFYVE28Q9HCC9 887 aa22.54■■□□□ 1.2
PDLIM7-205ENST00000393551 PTPN22Q9Y2R2 807 aa22.54■■□□□ 1.2
PDLIM7-205ENST00000393551 MROH7-TTC4A0A0A0MT08 1334 aa22.54■■□□□ 1.2
PDLIM7-205ENST00000393551 PHF20L1A8MW92 1017 aa22.53■■□□□ 1.2
PDLIM7-205ENST00000393551 ZBTB7BO15156 539 aaPredicted RBP22.53■■□□□ 1.2
PDLIM7-205ENST00000393551 ENTPD3O75355 529 aa22.53■■□□□ 1.2
PDLIM7-205ENST00000393551 MCAMP43121 646 aa22.53■■□□□ 1.2
PDLIM7-205ENST00000393551 BTDP43251 543 aa22.53■■□□□ 1.2
PDLIM7-205ENST00000393551 RHBDL3P58872 404 aa22.53■■□□□ 1.2
PDLIM7-205ENST00000393551 ATP8B2P98198 1209 aa22.53■■□□□ 1.2
PDLIM7-205ENST00000393551 MOGSQ13724 837 aa22.53■■□□□ 1.2
PDLIM7-205ENST00000393551 SPTY2D1Q68D10 685 aaPredicted RBP22.53■■□□□ 1.2
PDLIM7-205ENST00000393551 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms