RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 MB21D2Q8IYB1 491 aaPredicted RBP12.94□□□□□ -0.34
PDGFD-202ENST00000393158 WDR66Q8TBY9 1149 aa12.94□□□□□ -0.34
PDGFD-202ENST00000393158 MFSD14BQ5SR56 506 aa12.93□□□□□ -0.34
PDGFD-202ENST00000393158 PODNQ7Z5L7 613 aa12.93□□□□□ -0.34
PDGFD-202ENST00000393158 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.93□□□□□ -0.34
PDGFD-202ENST00000393158 GNL3LQ9NVN8 582 aaKnown RBP12.93□□□□□ -0.34
PDGFD-202ENST00000393158 MYH6P13533 1939 aa12.93□□□□□ -0.34
PDGFD-202ENST00000393158 CHAF1AQ13111 956 aaPredicted RBP12.93□□□□□ -0.34
PDGFD-202ENST00000393158 SH3RF3Q8TEJ3 882 aaPredicted RBP12.93□□□□□ -0.34
PDGFD-202ENST00000393158 FHDC1Q9C0D6 1143 aaPredicted RBP12.93□□□□□ -0.34
PDGFD-202ENST00000393158 ANAPC4Q9UJX5 808 aa12.93□□□□□ -0.34
PDGFD-202ENST00000393158 CYP7A1P22680 504 aa12.93□□□□□ -0.34
PDGFD-202ENST00000393158 LRP2BPQ9P2M1 347 aa12.93□□□□□ -0.34
PDGFD-202ENST00000393158 DAGLAQ9Y4D2 1042 aa12.93□□□□□ -0.34
PDGFD-202ENST00000393158 YBX3P16989 372 aaKnown RBP eCLIP12.92□□□□□ -0.34
PDGFD-202ENST00000393158 CC2D2BQ6DHV5 1058 aa12.92□□□□□ -0.34
PDGFD-202ENST00000393158 DCP1AQ9NPI6 582 aaPredicted RBP12.92□□□□□ -0.34
PDGFD-202ENST00000393158 IGSF3O75054 1194 aa12.92□□□□□ -0.34
PDGFD-202ENST00000393158 CCDC93Q567U6 631 aa12.92□□□□□ -0.34
PDGFD-202ENST00000393158 STRIP1Q5VSL9 837 aa12.92□□□□□ -0.34
PDGFD-202ENST00000393158 CTR9Q6PD62 1173 aa12.92□□□□□ -0.34
PDGFD-202ENST00000393158 VPS37DQ86XT2 251 aa12.92□□□□□ -0.34
PDGFD-202ENST00000393158 ZBED3Q96IU2 234 aaPredicted RBP12.92□□□□□ -0.34
PDGFD-202ENST00000393158 DDX4Q9NQI0 724 aaKnown RBP12.92□□□□□ -0.34
PDGFD-202ENST00000393158 AATFQ9NY61 560 aaKnown RBP eCLIP12.92□□□□□ -0.34
PDGFD-202ENST00000393158 PARP14Q460N5 1801 aa12.92□□□□□ -0.34
PDGFD-202ENST00000393158 CYP2D7A0A087X1C5 515 aa12.92□□□□□ -0.34
PDGFD-202ENST00000393158 AK2P54819 239 aa12.92□□□□□ -0.34
PDGFD-202ENST00000393158 CUL4AQ13619 759 aa12.92□□□□□ -0.34
PDGFD-202ENST00000393158 SENP2Q9HC62 589 aa12.92□□□□□ -0.34
PDGFD-202ENST00000393158 U3KPZ7 1027 aaPredicted RBP12.92□□□□□ -0.34
PDGFD-202ENST00000393158 SHTN1A0MZ66 631 aa12.91□□□□□ -0.34
PDGFD-202ENST00000393158 VIL1P09327 827 aaKnown RBP12.91□□□□□ -0.34
PDGFD-202ENST00000393158 EVCP57679 992 aa12.91□□□□□ -0.34
PDGFD-202ENST00000393158 ZSCAN25Q6NSZ9 544 aa12.91□□□□□ -0.34
PDGFD-202ENST00000393158 CYB5R4Q7L1T6 521 aa12.91□□□□□ -0.34
PDGFD-202ENST00000393158 GPHNQ9NQX3 736 aaPredicted RBP12.91□□□□□ -0.34
PDGFD-202ENST00000393158 PGAP2Q9UHJ9 254 aa12.91□□□□□ -0.34
PDGFD-202ENST00000393158 WDHD1O75717 1129 aaPredicted RBP12.91□□□□□ -0.34
PDGFD-202ENST00000393158 RPS6KB1P23443 525 aa12.91□□□□□ -0.34
PDGFD-202ENST00000393158 RASSF7Q02833 373 aa12.91□□□□□ -0.34
PDGFD-202ENST00000393158 NAA16Q6N069 864 aaPredicted RBP12.91□□□□□ -0.34
PDGFD-202ENST00000393158 TMED8Q6PL24 325 aaPredicted RBP12.91□□□□□ -0.34
PDGFD-202ENST00000393158 RTKN2Q8IZC4 609 aa12.91□□□□□ -0.34
PDGFD-202ENST00000393158 TCEANC2Q96MN5 208 aa12.91□□□□□ -0.34
PDGFD-202ENST00000393158 UPF2Q9HAU5 1272 aaKnown RBP12.91□□□□□ -0.34
PDGFD-202ENST00000393158 OTOFQ9HC10 1997 aa12.91□□□□□ -0.34
PDGFD-202ENST00000393158 CASTP20810 708 aaKnown RBP12.91□□□□□ -0.34
PDGFD-202ENST00000393158 POLD1P28340 1107 aa12.91□□□□□ -0.34
PDGFD-202ENST00000393158 ZC3H12CQ9C0D7 883 aaKnown RBP12.91□□□□□ -0.34
PDGFD-202ENST00000393158 TPCN1Q9ULQ1 816 aa12.91□□□□□ -0.34
PDGFD-202ENST00000393158 CENPFP49454 3210 aa12.91□□□□□ -0.34
PDGFD-202ENST00000393158 DALRD3Q5D0E6 543 aaKnown RBP12.9□□□□□ -0.34
PDGFD-202ENST00000393158 VPS33BQ9H267 617 aa12.9□□□□□ -0.34
PDGFD-202ENST00000393158 RAI14Q9P0K7 980 aa12.9□□□□□ -0.34
PDGFD-202ENST00000393158 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.9□□□□□ -0.34
PDGFD-202ENST00000393158 SUGT1Q9Y2Z0 365 aa12.9□□□□□ -0.34
PDGFD-202ENST00000393158 LDHBP07195 334 aaKnown RBP12.9□□□□□ -0.34
PDGFD-202ENST00000393158 LARP6Q9BRS8 491 aaKnown RBP12.9□□□□□ -0.34
PDGFD-202ENST00000393158 MAGEB6P1A0A0J9YX57 407 aa12.9□□□□□ -0.34
PDGFD-202ENST00000393158 HAND2P61296 217 aa12.9□□□□□ -0.34
PDGFD-202ENST00000393158 SYT17Q9BSW7 474 aa12.9□□□□□ -0.34
PDGFD-202ENST00000393158 MRIQ9BWK5 157 aa12.9□□□□□ -0.34
PDGFD-202ENST00000393158 ATRNL1Q5VV63 1379 aa12.9□□□□□ -0.35
PDGFD-202ENST00000393158 FZD9O00144 591 aa12.89□□□□□ -0.35
PDGFD-202ENST00000393158 EGFRP00533 1210 aa12.89□□□□□ -0.35
PDGFD-202ENST00000393158 CYP2D6P10635 497 aa12.89□□□□□ -0.35
PDGFD-202ENST00000393158 ANP32AP39687 249 aaKnown RBP12.89□□□□□ -0.35
PDGFD-202ENST00000393158 NEK4P51957 841 aa12.89□□□□□ -0.35
PDGFD-202ENST00000393158 GRIPAP1Q4V328 841 aa12.89□□□□□ -0.35
PDGFD-202ENST00000393158 JAKMIP1Q96N16 626 aaKnown RBP12.89□□□□□ -0.35
PDGFD-202ENST00000393158 K7ELQ4 463 aaPredicted RBP12.89□□□□□ -0.35
PDGFD-202ENST00000393158 SLURP2P0DP57 97 aa12.89□□□□□ -0.35
PDGFD-202ENST00000393158 CTDSPL2Q05D32 466 aa12.89□□□□□ -0.35
PDGFD-202ENST00000393158 SH3BP5LQ7L8J4 393 aa12.89□□□□□ -0.35
PDGFD-202ENST00000393158 ZFPM1Q8IX07 1006 aa12.89□□□□□ -0.35
PDGFD-202ENST00000393158 ZGPATQ8N5A5 531 aaKnown RBP12.89□□□□□ -0.35
PDGFD-202ENST00000393158 AIDAQ96BJ3 306 aa12.89□□□□□ -0.35
PDGFD-202ENST00000393158 TMX3Q96JJ7 454 aa12.89□□□□□ -0.35
PDGFD-202ENST00000393158 PSMD14O00487 310 aa12.88□□□□□ -0.35
PDGFD-202ENST00000393158 DTNBO60941 627 aa12.88□□□□□ -0.35
PDGFD-202ENST00000393158 IARSP41252 1262 aaKnown RBP12.88□□□□□ -0.35
PDGFD-202ENST00000393158 ME3Q16798 604 aa12.88□□□□□ -0.35
PDGFD-202ENST00000393158 GLIPR1L2Q4G1C9 344 aa12.88□□□□□ -0.35
PDGFD-202ENST00000393158 STAG1Q8WVM7 1258 aa12.88□□□□□ -0.35
PDGFD-202ENST00000393158 ZDHHC15Q96MV8 337 aa12.88□□□□□ -0.35
PDGFD-202ENST00000393158 SPON1Q9HCB6 807 aa12.88□□□□□ -0.35
PDGFD-202ENST00000393158 SLC4A4Q9Y6R1 1079 aa12.88□□□□□ -0.35
PDGFD-202ENST00000393158 FLT1P17948 1338 aa12.88□□□□□ -0.35
PDGFD-202ENST00000393158 PLCD1P51178 756 aa12.88□□□□□ -0.35
PDGFD-202ENST00000393158 HPS5Q9UPZ3 1129 aa12.88□□□□□ -0.35
PDGFD-202ENST00000393158 GIMAP6Q6P9H5 292 aa12.88□□□□□ -0.35
PDGFD-202ENST00000393158 IGDCC4Q8TDY8 1250 aa12.88□□□□□ -0.35
PDGFD-202ENST00000393158 TBC1D22AQ8WUA7 517 aa12.88□□□□□ -0.35
PDGFD-202ENST00000393158 EYA3Q99504 573 aa12.88□□□□□ -0.35
PDGFD-202ENST00000393158 COL2A1P02458 1487 aaPredicted RBP12.87□□□□□ -0.35
PDGFD-202ENST00000393158 CNTNAP1P78357 1384 aa12.87□□□□□ -0.35
PDGFD-202ENST00000393158 NID2Q14112 1375 aa12.87□□□□□ -0.35
PDGFD-202ENST00000393158 BTDP43251 543 aa12.87□□□□□ -0.35
PDGFD-202ENST00000393158 PKP1Q13835 747 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms