RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 ALDH1B1P30837 517 aa25.16■■□□□ 1.62
SPHK1-202ENST00000392496 LARP1BQ659C4 914 aaKnown RBP25.16■■□□□ 1.62
SPHK1-202ENST00000392496 SMARCC2Q8TAQ2 1214 aa25.16■■□□□ 1.62
SPHK1-202ENST00000392496 TBC1D16Q8TBP0 767 aa25.16■■□□□ 1.62
SPHK1-202ENST00000392496 CNNM2Q9H8M5 875 aa25.16■■□□□ 1.62
SPHK1-202ENST00000392496 LMBRD1Q9NUN5 540 aa25.16■■□□□ 1.62
SPHK1-202ENST00000392496 ATP6V0A2Q9Y487 856 aa25.16■■□□□ 1.62
SPHK1-202ENST00000392496 F13A1P00488 732 aa25.16■■□□□ 1.62
SPHK1-202ENST00000392496 PRDX5P30044 214 aa25.16■■□□□ 1.62
SPHK1-202ENST00000392496 AKNAD1Q5T1N1 836 aa25.16■■□□□ 1.62
SPHK1-202ENST00000392496 IL1R1P14778 569 aa25.15■■□□□ 1.62
SPHK1-202ENST00000392496 DYNLL1P63167 89 aaKnown RBP25.15■■□□□ 1.62
SPHK1-202ENST00000392496 GIMAP6Q6P9H5 292 aa25.15■■□□□ 1.62
SPHK1-202ENST00000392496 STAG1Q8WVM7 1258 aa25.15■■□□□ 1.62
SPHK1-202ENST00000392496 CD209Q9NNX6 404 aa25.15■■□□□ 1.62
SPHK1-202ENST00000392496 ATP6V1DQ9Y5K8 247 aa25.15■■□□□ 1.62
SPHK1-202ENST00000392496 COL11A2P13942 1736 aaPredicted RBP25.14■■□□□ 1.62
SPHK1-202ENST00000392496 PSDA5PKW4 1024 aaPredicted RBP25.14■■□□□ 1.62
SPHK1-202ENST00000392496 MSL1Q68DK7 614 aa25.14■■□□□ 1.62
SPHK1-202ENST00000392496 TMEM87BQ96K49 555 aa25.14■■□□□ 1.62
SPHK1-202ENST00000392496 GPR101Q96P66 508 aaPredicted RBP25.14■■□□□ 1.62
SPHK1-202ENST00000392496 KRT23Q9C075 422 aa25.14■■□□□ 1.62
SPHK1-202ENST00000392496 POLLQ9UGP5 575 aa25.14■■□□□ 1.62
SPHK1-202ENST00000392496 NEDD4P46934 1319 aa25.14■■□□□ 1.61
SPHK1-202ENST00000392496 CTDSPL2Q05D32 466 aa25.13■■□□□ 1.61
SPHK1-202ENST00000392496 CYB5R4Q7L1T6 521 aa25.13■■□□□ 1.61
SPHK1-202ENST00000392496 SDR42E1Q8WUS8 393 aa25.13■■□□□ 1.61
SPHK1-202ENST00000392496 MASTLQ96GX5 879 aa25.13■■□□□ 1.61
SPHK1-202ENST00000392496 ANAPC4Q9UJX5 808 aa25.13■■□□□ 1.61
SPHK1-202ENST00000392496 B4E1Z4 1266 aa25.13■■□□□ 1.61
SPHK1-202ENST00000392496 HMGN5P82970 282 aaKnown RBP25.13■■□□□ 1.61
SPHK1-202ENST00000392496 MFSD6Q6ZSS7 791 aa25.13■■□□□ 1.61
SPHK1-202ENST00000392496 DZIP1Q86YF9 867 aaKnown RBP25.13■■□□□ 1.61
SPHK1-202ENST00000392496 RNF41Q9H4P4 317 aaPredicted RBP25.13■■□□□ 1.61
SPHK1-202ENST00000392496 GPHNQ9NQX3 736 aaPredicted RBP25.13■■□□□ 1.61
SPHK1-202ENST00000392496 JAK2O60674 1132 aa25.12■■□□□ 1.61
SPHK1-202ENST00000392496 LDHBP07195 334 aaKnown RBP25.12■■□□□ 1.61
SPHK1-202ENST00000392496 KLHL40Q2TBA0 621 aa25.12■■□□□ 1.61
SPHK1-202ENST00000392496 NSUN7Q8NE18 718 aaKnown RBP25.12■■□□□ 1.61
SPHK1-202ENST00000392496 ANGEL1Q9UNK9 670 aaKnown RBP25.12■■□□□ 1.61
SPHK1-202ENST00000392496 SH2B2O14492 632 aaPredicted RBP25.11■■□□□ 1.61
SPHK1-202ENST00000392496 DTNBO60941 627 aa25.11■■□□□ 1.61
SPHK1-202ENST00000392496 PPARAQ07869 468 aa25.11■■□□□ 1.61
SPHK1-202ENST00000392496 MTFR1LQ9H019 292 aa25.11■■□□□ 1.61
SPHK1-202ENST00000392496 JAG2Q9Y219 1238 aa25.11■■□□□ 1.61
SPHK1-202ENST00000392496 KLF18A0A0U1RQI7 1052 aa25.1■■□□□ 1.61
SPHK1-202ENST00000392496 C6orf229H3BNL8 230 aa25.1■■□□□ 1.61
SPHK1-202ENST00000392496 PRPF40AO75400 957 aaKnown RBP25.1■■□□□ 1.61
SPHK1-202ENST00000392496 GSTO1P78417 241 aa25.1■■□□□ 1.61
SPHK1-202ENST00000392496 CHAMP1Q96JM3 812 aa25.1■■□□□ 1.61
SPHK1-202ENST00000392496 CRNKL1Q9BZJ0 848 aaKnown RBP25.1■■□□□ 1.61
SPHK1-202ENST00000392496 BRPF3Q9ULD4 1205 aa25.1■■□□□ 1.61
SPHK1-202ENST00000392496 NAP1L2Q9ULW6 460 aaPredicted RBP25.1■■□□□ 1.61
SPHK1-202ENST00000392496 VPS37CA5D8V6 355 aaPredicted RBP25.1■■□□□ 1.61
SPHK1-202ENST00000392496 CTDNEP1O95476 244 aa25.1■■□□□ 1.61
SPHK1-202ENST00000392496 CCT2P78371 535 aaKnown RBP25.1■■□□□ 1.61
SPHK1-202ENST00000392496 MTA3Q9BTC8 594 aa25.1■■□□□ 1.61
SPHK1-202ENST00000392496 KIF3AQ9Y496 699 aa25.1■■□□□ 1.61
SPHK1-202ENST00000392496 TACC3Q9Y6A5 838 aa25.1■■□□□ 1.61
SPHK1-202ENST00000392496 DDX49Q9Y6V7 483 aaKnown RBP25.1■■□□□ 1.61
SPHK1-202ENST00000392496 POLD1P28340 1107 aa25.09■■□□□ 1.61
SPHK1-202ENST00000392496 NKX2-3Q8TAU0 364 aa25.09■■□□□ 1.61
SPHK1-202ENST00000392496 AATFQ9NY61 560 aaKnown RBP eCLIP25.09■■□□□ 1.61
SPHK1-202ENST00000392496 DHX16O60231 1041 aaKnown RBP25.08■■□□□ 1.61
SPHK1-202ENST00000392496 FAM184AQ8NB25 1140 aa25.08■■□□□ 1.61
SPHK1-202ENST00000392496 IGDCC4Q8TDY8 1250 aa25.08■■□□□ 1.61
SPHK1-202ENST00000392496 ATP8A2Q9NTI2 1148 aa25.08■■□□□ 1.61
SPHK1-202ENST00000392496 PTPDC1A2A3K4 754 aa25.08■■□□□ 1.6
SPHK1-202ENST00000392496 NCOA5Q9HCD5 579 aaKnown RBP25.08■■□□□ 1.6
SPHK1-202ENST00000392496 INCENPQ9NQS7 918 aa25.08■■□□□ 1.6
SPHK1-202ENST00000392496 ZSWIM5Q9P217 1185 aa25.08■■□□□ 1.6
SPHK1-202ENST00000392496 HPS5Q9UPZ3 1129 aa25.08■■□□□ 1.6
SPHK1-202ENST00000392496 GOLGA8BA8MQT2 603 aa25.07■■□□□ 1.6
SPHK1-202ENST00000392496 KDM4AO75164 1064 aa25.07■■□□□ 1.6
SPHK1-202ENST00000392496 LDHCP07864 332 aa25.07■■□□□ 1.6
SPHK1-202ENST00000392496 LIFRP42702 1097 aa25.07■■□□□ 1.6
SPHK1-202ENST00000392496 SGMS1Q86VZ5 419 aa25.07■■□□□ 1.6
SPHK1-202ENST00000392496 MPNDQ8N594 471 aa25.07■■□□□ 1.6
SPHK1-202ENST00000392496 TMX4Q9H1E5 349 aaPredicted RBP25.07■■□□□ 1.6
SPHK1-202ENST00000392496 BAZ2AQ9UIF9 1905 aaKnown RBP25.07■■□□□ 1.6
SPHK1-202ENST00000392496 MINDY4BA8MYZ0 360 aa25.06■■□□□ 1.6
SPHK1-202ENST00000392496 ZBTB7AO95365 584 aa25.06■■□□□ 1.6
SPHK1-202ENST00000392496 PCP11498 1178 aaKnown RBP25.06■■□□□ 1.6
SPHK1-202ENST00000392496 STYK1Q6J9G0 422 aa25.06■■□□□ 1.6
SPHK1-202ENST00000392496 CDC37L1Q7L3B6 337 aa25.06■■□□□ 1.6
SPHK1-202ENST00000392496 TMEM87AQ8NBN3 555 aa25.06■■□□□ 1.6
SPHK1-202ENST00000392496 TBC1D22AQ8WUA7 517 aa25.06■■□□□ 1.6
SPHK1-202ENST00000392496 FAM205AQ6ZU69 1335 aa25.06■■□□□ 1.6
SPHK1-202ENST00000392496 C2CD5Q86YS7 1000 aa25.05■■□□□ 1.6
SPHK1-202ENST00000392496 DDX11Q96FC9 970 aa25.05■■□□□ 1.6
SPHK1-202ENST00000392496 COA1Q9GZY4 146 aa25.05■■□□□ 1.6
SPHK1-202ENST00000392496 GZF1Q9H116 711 aaPredicted RBP25.05■■□□□ 1.6
SPHK1-202ENST00000392496 TCHHQ07283 1943 aa25.05■■□□□ 1.6
SPHK1-202ENST00000392496 H0YIN7 160 aa25.05■■□□□ 1.6
SPHK1-202ENST00000392496 PPP4CP60510 307 aa25.05■■□□□ 1.6
SPHK1-202ENST00000392496 TMEM67Q5HYA8 995 aa25.05■■□□□ 1.6
SPHK1-202ENST00000392496 CTR9Q6PD62 1173 aa25.05■■□□□ 1.6
SPHK1-202ENST00000392496 PDGFDQ9GZP0 370 aaPredicted RBP25.05■■□□□ 1.6
SPHK1-202ENST00000392496 LY9Q9HBG7 655 aa25.05■■□□□ 1.6
SPHK1-202ENST00000392496 DCP1AQ9NPI6 582 aaPredicted RBP25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms