RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 NEDD4P46934 1319 aa13.5□□□□□ -0.25
SMARCAL1-203ENST00000392128 LAMB1P07942 1786 aa13.5□□□□□ -0.25
SMARCAL1-203ENST00000392128 LDHBP07195 334 aaKnown RBP13.5□□□□□ -0.25
SMARCAL1-203ENST00000392128 PDCP20941 246 aa13.5□□□□□ -0.25
SMARCAL1-203ENST00000392128 DYNLL1P63167 89 aaKnown RBP13.5□□□□□ -0.25
SMARCAL1-203ENST00000392128 AKNAD1Q5T1N1 836 aa13.5□□□□□ -0.25
SMARCAL1-203ENST00000392128 DZIP1Q86YF9 867 aaKnown RBP13.5□□□□□ -0.25
SMARCAL1-203ENST00000392128 PDIA3P30101 505 aaKnown RBP13.49□□□□□ -0.25
SMARCAL1-203ENST00000392128 SKOR2Q2VWA4 1001 aaPredicted RBP13.49□□□□□ -0.25
SMARCAL1-203ENST00000392128 MCTP1Q6DN14 999 aa13.49□□□□□ -0.25
SMARCAL1-203ENST00000392128 SDR42E1Q8WUS8 393 aa13.49□□□□□ -0.25
SMARCAL1-203ENST00000392128 KRT23Q9C075 422 aa13.49□□□□□ -0.25
SMARCAL1-203ENST00000392128 ANAPC4Q9UJX5 808 aa13.49□□□□□ -0.25
SMARCAL1-203ENST00000392128 JAG2Q9Y219 1238 aa13.49□□□□□ -0.25
SMARCAL1-203ENST00000392128 MYH2Q9UKX2 1941 aa13.49□□□□□ -0.25
SMARCAL1-203ENST00000392128 C6orf229H3BNL8 230 aa13.49□□□□□ -0.25
SMARCAL1-203ENST00000392128 CTDSPL2Q05D32 466 aa13.49□□□□□ -0.25
SMARCAL1-203ENST00000392128 FOXD4L5Q5VV16 416 aaPredicted RBP13.49□□□□□ -0.25
SMARCAL1-203ENST00000392128 STYK1Q6J9G0 422 aa13.49□□□□□ -0.25
SMARCAL1-203ENST00000392128 SMARCC2Q8TAQ2 1214 aa13.49□□□□□ -0.25
SMARCAL1-203ENST00000392128 FOXD4L4Q8WXT5 416 aaPredicted RBP13.49□□□□□ -0.25
SMARCAL1-203ENST00000392128 TMEM87BQ96K49 555 aa13.49□□□□□ -0.25
SMARCAL1-203ENST00000392128 B4E1Z4 1266 aa13.48□□□□□ -0.25
SMARCAL1-203ENST00000392128 GSTO1P78417 241 aa13.48□□□□□ -0.25
SMARCAL1-203ENST00000392128 PPARAQ07869 468 aa13.48□□□□□ -0.25
SMARCAL1-203ENST00000392128 MFSD6Q6ZSS7 791 aa13.48□□□□□ -0.25
SMARCAL1-203ENST00000392128 CYB5R4Q7L1T6 521 aa13.48□□□□□ -0.25
SMARCAL1-203ENST00000392128 C2CD5Q86YS7 1000 aa13.48□□□□□ -0.25
SMARCAL1-203ENST00000392128 RNF41Q9H4P4 317 aaPredicted RBP13.48□□□□□ -0.25
SMARCAL1-203ENST00000392128 MTMR6Q9Y217 621 aa13.48□□□□□ -0.25
SMARCAL1-203ENST00000392128 F13A1P00488 732 aa13.48□□□□□ -0.25
SMARCAL1-203ENST00000392128 GSE1Q14687 1217 aa13.48□□□□□ -0.25
SMARCAL1-203ENST00000392128 LARP1BQ659C4 914 aaKnown RBP13.48□□□□□ -0.25
SMARCAL1-203ENST00000392128 MPNDQ8N594 471 aa13.48□□□□□ -0.25
SMARCAL1-203ENST00000392128 CRNKL1Q9BZJ0 848 aaKnown RBP13.48□□□□□ -0.25
SMARCAL1-203ENST00000392128 GPHNQ9NQX3 736 aaPredicted RBP13.48□□□□□ -0.25
SMARCAL1-203ENST00000392128 AATFQ9NY61 560 aaKnown RBP eCLIP13.48□□□□□ -0.25
SMARCAL1-203ENST00000392128 ANGEL1Q9UNK9 670 aaKnown RBP13.48□□□□□ -0.25
SMARCAL1-203ENST00000392128 TACC3Q9Y6A5 838 aa13.48□□□□□ -0.25
SMARCAL1-203ENST00000392128 H0YIN7 160 aa13.47□□□□□ -0.25
SMARCAL1-203ENST00000392128 SH2B2O14492 632 aaPredicted RBP13.47□□□□□ -0.25
SMARCAL1-203ENST00000392128 NKX2-3Q8TAU0 364 aa13.47□□□□□ -0.25
SMARCAL1-203ENST00000392128 MTA3Q9BTC8 594 aa13.47□□□□□ -0.25
SMARCAL1-203ENST00000392128 COA1Q9GZY4 146 aa13.47□□□□□ -0.25
SMARCAL1-203ENST00000392128 TMX4Q9H1E5 349 aaPredicted RBP13.47□□□□□ -0.25
SMARCAL1-203ENST00000392128 ATP8A2Q9NTI2 1148 aa13.47□□□□□ -0.25
SMARCAL1-203ENST00000392128 ATP6V1DQ9Y5K8 247 aa13.47□□□□□ -0.25
SMARCAL1-203ENST00000392128 TCHHQ07283 1943 aa13.47□□□□□ -0.25
SMARCAL1-203ENST00000392128 FAM205AQ6ZU69 1335 aa13.47□□□□□ -0.25
SMARCAL1-203ENST00000392128 SLX4Q8IY92 1834 aa13.47□□□□□ -0.25
SMARCAL1-203ENST00000392128 HMGN5P82970 282 aaKnown RBP13.47□□□□□ -0.25
SMARCAL1-203ENST00000392128 DPP8Q6V1X1 898 aaPredicted RBP13.47□□□□□ -0.25
SMARCAL1-203ENST00000392128 DEFB132Q7Z7B7 95 aa13.47□□□□□ -0.25
SMARCAL1-203ENST00000392128 NSUN7Q8NE18 718 aaKnown RBP13.47□□□□□ -0.25
SMARCAL1-203ENST00000392128 TBC1D22AQ8WUA7 517 aa13.47□□□□□ -0.25
SMARCAL1-203ENST00000392128 LMBRD1Q9NUN5 540 aa13.47□□□□□ -0.25
SMARCAL1-203ENST00000392128 BRPF3Q9ULD4 1205 aa13.47□□□□□ -0.25
SMARCAL1-203ENST00000392128 DLEC1Q9Y238 1755 aa13.46□□□□□ -0.25
SMARCAL1-203ENST00000392128 KLF18A0A0U1RQI7 1052 aa13.46□□□□□ -0.25
SMARCAL1-203ENST00000392128 JAK2O60674 1132 aa13.46□□□□□ -0.25
SMARCAL1-203ENST00000392128 CTDNEP1O95476 244 aa13.46□□□□□ -0.25
SMARCAL1-203ENST00000392128 LDHCP07864 332 aa13.46□□□□□ -0.25
SMARCAL1-203ENST00000392128 PCP11498 1178 aaKnown RBP13.46□□□□□ -0.25
SMARCAL1-203ENST00000392128 IGDCC4Q8TDY8 1250 aa13.46□□□□□ -0.25
SMARCAL1-203ENST00000392128 ZNF622Q969S3 477 aaKnown RBP eCLIP13.46□□□□□ -0.25
SMARCAL1-203ENST00000392128 ZSWIM5Q9P217 1185 aa13.46□□□□□ -0.25
SMARCAL1-203ENST00000392128 DTNBO60941 627 aa13.45□□□□□ -0.26
SMARCAL1-203ENST00000392128 KDM4AO75164 1064 aa13.45□□□□□ -0.26
SMARCAL1-203ENST00000392128 CERS3Q8IU89 383 aa13.45□□□□□ -0.26
SMARCAL1-203ENST00000392128 DCP1AQ9NPI6 582 aaPredicted RBP13.45□□□□□ -0.26
SMARCAL1-203ENST00000392128 INCENPQ9NQS7 918 aa13.45□□□□□ -0.26
SMARCAL1-203ENST00000392128 HPS5Q9UPZ3 1129 aa13.45□□□□□ -0.26
SMARCAL1-203ENST00000392128 CDK5RAP2Q96SN8 1893 aa13.45□□□□□ -0.26
SMARCAL1-203ENST00000392128 MINDY4BA8MYZ0 360 aa13.45□□□□□ -0.26
SMARCAL1-203ENST00000392128 LIFRP42702 1097 aa13.45□□□□□ -0.26
SMARCAL1-203ENST00000392128 PPP4CP60510 307 aa13.45□□□□□ -0.26
SMARCAL1-203ENST00000392128 CCT2P78371 535 aaKnown RBP13.45□□□□□ -0.26
SMARCAL1-203ENST00000392128 GRIK5Q16478 980 aa13.45□□□□□ -0.26
SMARCAL1-203ENST00000392128 CTR9Q6PD62 1173 aa13.45□□□□□ -0.26
SMARCAL1-203ENST00000392128 SGMS1Q86VZ5 419 aa13.45□□□□□ -0.26
SMARCAL1-203ENST00000392128 ZC3H12CQ9C0D7 883 aaKnown RBP13.45□□□□□ -0.26
SMARCAL1-203ENST00000392128 NAP1L2Q9ULW6 460 aaPredicted RBP13.45□□□□□ -0.26
SMARCAL1-203ENST00000392128 MROH7-TTC4A0A0A0MT08 1334 aa13.45□□□□□ -0.26
SMARCAL1-203ENST00000392128 PTPDC1A2A3K4 754 aa13.44□□□□□ -0.26
SMARCAL1-203ENST00000392128 VPS37CA5D8V6 355 aaPredicted RBP13.44□□□□□ -0.26
SMARCAL1-203ENST00000392128 GOLGA8BA8MQT2 603 aa13.44□□□□□ -0.26
SMARCAL1-203ENST00000392128 DHX16O60231 1041 aaKnown RBP13.44□□□□□ -0.26
SMARCAL1-203ENST00000392128 BAG3O95817 575 aa13.44□□□□□ -0.26
SMARCAL1-203ENST00000392128 FGRP09769 529 aa13.44□□□□□ -0.26
SMARCAL1-203ENST00000392128 MFSD14BQ5SR56 506 aa13.44□□□□□ -0.26
SMARCAL1-203ENST00000392128 OLFM4Q6UX06 510 aa13.44□□□□□ -0.26
SMARCAL1-203ENST00000392128 CNKSR1Q969H4 720 aa13.44□□□□□ -0.26
SMARCAL1-203ENST00000392128 LY9Q9HBG7 655 aa13.44□□□□□ -0.26
SMARCAL1-203ENST00000392128 NCOA5Q9HCD5 579 aaKnown RBP13.44□□□□□ -0.26
SMARCAL1-203ENST00000392128 KIF3AQ9Y496 699 aa13.44□□□□□ -0.26
SMARCAL1-203ENST00000392128 NAV1Q8NEY1 1877 aa13.44□□□□□ -0.26
SMARCAL1-203ENST00000392128 C10orf71Q711Q0 1435 aa13.44□□□□□ -0.26
SMARCAL1-203ENST00000392128 KLHL40Q2TBA0 621 aa13.44□□□□□ -0.26
SMARCAL1-203ENST00000392128 SBK1Q52WX2 424 aa13.44□□□□□ -0.26
SMARCAL1-203ENST00000392128 CHAMP1Q96JM3 812 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms